Cucumis sativus

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Unknown (554)
Genomics (381)
Transcriptomics (79)
Proteomics (20)
Metabolomics (6)
Other (1)

Organisms

Cucumis sativus (66)
Apostichopus japonicus (9)
Cucumis sativus var. sativus (6)
Arabidopsis thaliana (6)
Solanum lycopersicum (5)
Glycine max (3)
Oryza sativa (3)
Zea mays (3)
Colletotrichum orbiculare (2)
Fragaria vesca (2)
Prunus persica (2)
Malus domestica (2)
Vitis vinifera (2)
Musa acuminata AAA Group (2)
Lagenaria siceraria (1)
Meloidogyne incognita (1)
Holothuria glaberrima (1)
Panicum hallii (1)
Citrus x clementina (1)
Erythranthe guttata (1)
Pyrus x bretschneideri (1)
Selaginella moellendorffii (1)
Cucumis hystrix (1)
Cucumis x hytivus (1)
Ricinus communis (1)
Theobroma cacao (1)
Eutrema salsugineum (1)
Panicum virgatum (1)
Cannabis sativa (1)
Carica papaya (1)

Organisms

Cucumis sativus (277)
Cucumis sativus var. sativus (18)
Cucumis melo (3)
Bacillus velezensis (2)
Pararhizobium sp. O133 (1)
Cucumis sativus var. xishuangbannanesis (1)
Cucumis sativus var. hardwickii (1)
Cucurbita ficifolia (1)
Cladosporium cucumerinum (1)
Colletotrichum orbiculare (1)
Macrophomina phaseolina (1)
Ralstonia pseudosolanacearum (1)
unidentified (1)
Cuscuta campestris (1)
food fermentation metagenome (1)
wastewater metagenome (1)
fungal sp. (1)
endophyte metagenome (1)
Capsicum annuum (1)
rhizosphere metagenome (1)
soil metagenome (1)
Arabidopsis thaliana (1)

Repository

ENA (378)
geo (51)
biostudies-arrayexpress (31)
pride (9)
iProX (8)
GNPS (4)
MassIVE (3)
MetaboLights (2)
EVA (1)

Tissue

Leaf (6)
Plant cell (3)
Cotyledon (1)
Root (1)
Skin (1)

Technology Type

Mass Spectrometry (9)
Shotgun proteomics (5)
Mass spectrometry (2)
Data-dependent acquisition (1)
Gel-based experiment (1)
HDMSE (1)
Top-down proteomics (1)

Instrument Platform

Q Exactive Plus (4)
Liquid chromatography mass spectroscopy (2)
Illumina HiSeq 2000 (1)
Xevo G2-XS QTof (1)
Gas Chromatography MS - (1)
Gas Chromatography MS - positive (1)

Publication Date

2015 (14)
2018 (10)
2014 (9)
2022 (9)
2020 (9)
2016 (8)
2023 (8)
2011 (7)
2019 (7)
2026 (5)
2024 (5)
2012 (4)
2025 (3)
2021 (3)
2013 (2)
2017 (2)
2010 (1)
2009 (1)

CHEBI ID

CHEBI:64307 (2)
CHEBI:140436 (2)
CHEBI:26849 (2)
CHEBI:15440 (2)
CHEBI:24267 (2)
CHEBI:2089 (2)
CHEBI:17395 (2)
CHEBI:27861 (2)
CHEBI:1230 (2)
CHEBI:55481 (2)
CHEBI:16072 (2)
CHEBI:17521 (2)
CHEBI:69081 (2)
CHEBI:75555 (2)
CHEBI:25801 (2)
CHEBI:28941 (2)
CHEBI:28260 (2)
CHEBI:16070 (2)
CHEBI:28814 (2)
CHEBI:33404 (2)
CHEBI:78679 (2)
CHEBI:17822 (2)
CHEBI:30837 (2)
CHEBI:15887 (2)
CHEBI:17748 (2)
CHEBI:30794 (2)
CHEBI:17497 (2)
CHEBI:85148 (2)
CHEBI:17859 (2)
CHEBI:18211 (2)

Metabolite Name

3,4-dihydroxycinnamic acid (2)
Maleimide (2)
Behenic acid (2)
3-hydroxybutyric acid (2)
Alpha-Ecdysone 2 (1)
5-alpha-Cholestan-3-one 1 (1)
4-Cholesten-3-one 4 (1)
Cortexolone 3 (1)
Tetrahydrocorticosterone 3 (1)
4-Androsten-19-ol-3,17-dione 2 (1)
Isomaltose 2 (1)
5'-methylthioadenosine 1 (1)
Gentiobiose 1 (1)
Prostaglandin E2 1 (1)
Sophorose 2 (1)
Lactobionic Acid 1 (1)
Dihydrotestosterone (1)
Androsterone 1 (1)
Docosanoic acid methyl ester (1)
Piceatannol 2 (1)
D-erythro-sphingosine 1 (1)
Uridine 2 (1)
5-Methoxytryptamine 2 (1)
Pyridoxal phosphate 2 (1)
Glucose-6-phosphate 2 (1)
Glucoheptonic acid 1 (1)
Tryptophan 1 (1)
Beta-Mannosylglycerate 1 (1)
D-Glucoheptose 1 (1)
Trans-3,5-Dimethoxy-4-hydroxycinnamaldehyde 1 (1)

First Public Date

2024 (50)
2025 (48)
2019 (38)
2023 (36)
2021 (32)
2026 (30)
2018 (30)
2022 (29)
2020 (23)
2017 (22)
2015 (14)
2013 (10)
2016 (9)
2014 (7)

Study type

Transcription profiling by array (12)
RNA-seq of coding RNA (11)
RNA-seq of non coding RNA (6)
Transcription profiling by RT-PCR (2)

Release Date

2022 (70)
2021 (67)
2025 (61)
2023 (58)
2020 (46)
2018 (39)
2024 (38)
2019 (37)
2016 (33)
2017 (28)
2015 (25)
2014 (25)
2012 (14)
2011 (12)
2013 (10)
2010 (10)
2009 (4)
2026 (4)
2007 (2)
2008 (1)
2005 (1)

Lab affiliation

College of Bioscience and Biotechnology, Shenyang Agricultural University, Shenyang 110866, PR China (1)
Department of Bioorganic Chemistry, Leibniz Institute of Plant Biochemistry, 06120 Halle (Saale), Germany (1)
Gansu Agricultural University, College of Horticulture, Vegetable Cultivation and Physiology Laboratory (1)
Guangdong Province Key Laboratory of Postharvest Physiology and Technology of Fruit and Vegetables, College of Horticulture, South China Agricultural University, Guangzhou, Guangdong 510642, China (1)
Institute of Neuroimmunology, Slovak Academy of Sciences, Slovak Republic (1)
Institute of Vegetable, Zhejiang Academy of Agriculture Sciences, Hangzhou, China (1)
School of Biological Science and Engineering, Shaanxi University of Technology, Hanzhong, China (1)
Shandong Agricultural University (1)
São Paulo State University (Unesp), School of Agricultural and Veterinarian Sciences, Department of Biology, Jaboticabal, Brazil (1)

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Proteomic analysis of the role of RALF34 small signaling peptides in the regulation of cucumber (Cucumis sativus) root development

To elucidate the functional role of the small signaling peptide RALF34 in the parental root meristem and its role in lateral root initiation, we studied changes in Cucumis sativus proteome during CsRALF34 gene overexpression. Composite plants with transgenic root systems carrying the construct for C...

ORGANISM(S): Cucumis sativus

2023-05-10 | PXD037725 | Pride

Cucumis sativus

Cucumis sativus Raw sequence reads

PRJNA549057 | ENA

Transcriptome analysis of cucumber response to nitrogen deficiency

Nitrogen is the most important mineral nutrient of plant. As a worldwide and economically important vegetable, cucumber (Cucumis sativus L.) has a strong nitrogen-dependence. We took whole transcriptome sequencing approach to compare the gene expression profiles of cucumber leaves and roots grown un...

ORGANISM(S): Cucumis sativus

2015-05-07 | E-GEOD-46678 | biostudies-arrayexpress

Cucumis sativus

Cucumis sativus Genome sequencing

PRJNA275259 | ENA

Transcriptome profiling reveals roles of meristem regulators and polarity genes during multicellular fruit trichome development in cucumber (Cucumis sativus L.).

Trichomes are the hair-like structures that are widely present on the surface of aerial organs and function in plant defense against biotic and abiotic stresses. Previous studies focus on the single cell trichomes in Arabidopsis and cotton, or multicellular glandular trichomes in tomato, but the dev...

ORGANISM(S): Cucumis sativus

2014-07-01 | E-GEOD-49607 | biostudies-arrayexpress

Cucumis sativus

Cucumis sativus Genome sequencing

PRJNA431537 | ENA

Cucumis sativus

Cucumis sativus Raw sequence reads

PRJNA816625 | ENA

Cucumis sativus

Cucumis sativus Raw sequence reads

PRJNA1119745 | ENA

Cucumis sativus