Dab - OmicsDI

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Unknown (522)
Transcriptomics (125)
Genomics (55)
Proteomics (28)
Metabolomics (4)
Other (2)
Methylation profiling (1)

Organisms

Mus musculus (78)
Homo sapiens (39)
Schizophyllum commune H4-8 (23)
Mycobacterium tuberculosis SP7 (23)
Oryza sativa Japonica Group (23)
Candidatus Endoriftia persephonae (23)
Mycobacterium tuberculosis SP10 (23)
Mycobacterium tuberculosis SP13 (23)
Mycobacterium tuberculosis SP22 (23)
Enterobacter ludwigii (23)
Chlamydomonas reinhardtii (23)
Lama (23)
Pyricularia oryzae P131 (23)
Enterococcus mundtii CRL35 (23)
Oncorhynchus tshawytscha (23)
Pseudomonas canadensis (23)
Strongylocentrotus purpuratus (23)
Influenza A virus (A/California/04/2009(H1N1)) (23)
Rattus norvegicus (4)
Buchnera aphidicola (3)
Limanda limanda (2)
Triticum aestivum (2)
Hippoglossoides platessoides (1)
Prunus persica (1)
Saccharomyces cerevisiae (1)
Drosophila melanogaster (1)
Arabidopsis thaliana (1)
Tursiops truncatus (1)
Mycosarcoma maydis (1)
Caenorhabditis elegans (1)

Organisms

Homo sapiens (12)
Limanda limanda (5)
Mus musculus (5)
Malus domestica (2)
Fusobacterium necrophorum DAB (1)
Leifsonia xyli (1)
Tursiops truncatus (1)
Pyrus x bretschneideri (1)
Mycosarcoma maydis (1)
phytoplankton metagenome (1)
Prunus persica (1)
Triticum aestivum (1)
Caenorhabditis elegans (1)
seawater metagenome (1)

Repository

biostudies-arrayexpress (120)
ENA (48)
pride (23)
geo (16)
MetaboLights (4)
MassIVE (3)
EGA (1)

Tissue

Brain (3)
Cell culture (3)
Monocyte (2)
Synovium (1)
Fruit (1)
Early embryonic cell (1)
Bone marrow (1)
Macrophage (1)
HeLa cell (1)
Leaf (1)
Primary cell (1)
Lung (1)
Colon (1)
Blood (1)

Disease

Normal (1)
Malaria (1)
Leptospirosis (1)
Rheumatoid arthritis (1)

Technology Type

Mass Spectrometry (23)
Shotgun proteomics (16)
Mass spectrometry (4)
Data-independent acquisition (4)
Bottom-up proteomics (3)
Top-down proteomics (2)
DiaPASEF (1)
SWATH MS (1)
SRM/MRM (1)
Data-dependent acquisition (1)

Instrument Platform

Illumina HiSeq 2500 (3)
NextSeq 500 (3)
Orbitrap Eclipse (3)
Orbitrap Exploris 240 (2)
Liquid Chromatography MS - positive - reverse-phase (2)
Liquid Chromatography MS - negative - reverse-phase (2)
TruSeq RNA Sample Preparation protocol (1)
Affymetrix (1)
Ion Torrent Proton (1)
Illumina NovaSeq 6000 (1)
Illumina HiSeq 4000 (1)
Q Exactive (1)
Orbitrap Fusion Lumos (1)
MS Imaging - (1)
Liquid Chromatography MS - negative - HILIC (1)
Liquid Chromatography MS - positive - HILIC (1)

Publication Date

2010 (23)
2011 (18)
2012 (14)
2009 (13)
2013 (10)
2015 (9)
2014 (9)
2008 (8)
2026 (8)
2025 (8)
2007 (7)
2022 (7)
2024 (6)
2021 (5)
2020 (4)
2019 (4)
2016 (4)
2006 (4)
2023 (3)
2004 (1)
2018 (1)

CHEBI ID

CHEBI:156013 (1)
CHEBI:140865 (1)
CHEBI:136131 (1)
CHEBI:167033 (1)
CHEBI:136129 (1)
CHEBI:167031 (1)
CHEBI:85590 (1)
CHEBI:134459 (1)
CHEBI:141494 (1)
CHEBI:136210 (1)
CHEBI:134291 (1)
CHEBI:132674 (1)
CHEBI:136203 (1)
CHEBI:140890 (1)
CHEBI:72347 (1)
CHEBI:71697 (1)
CHEBI:132673 (1)
CHEBI:132589 (1)
CHEBI:86030 (1)
CHEBI:86039 (1)
CHEBI:86032 (1)
CHEBI:86480 (1)
CHEBI:86475 (1)
CHEBI:136132 (1)
CHEBI:140893 (1)
CHEBI:140889 (1)
CHEBI:73067 (1)
CHEBI:64536 (1)
CHEBI:64480 (1)
CHEBI:67064 (1)

Metabolite Name

OH-C18:1 carnitine (1)
PE(P-16:0) (1)
C18 carnitine (1)
C18:1 carnitine (1)
C18:2 carnitine (1)
OH-C16:0 carnitine (1)
C16 carnitine (1)
C16:1 carnitine (1)
C14 carnitine (1)
PC(O-42:5) (1)
PC(P-42:4) (1)
PE(O-42-5) (1)
PE(38:0) (1)
PE(P-38:5) (1)
PE(28:0)/Dimyristoylphosphatidylethanolamine (1)
PC(P-36:1) (1)
PC(P-34:1) (1)
PC(P-34:2) (1)
PC(P-32:0) (1)
M1197T238 (1)
M1196T238 (1)
M1195T238 (1)
M1193T193 (1)
M1192T203 (1)
M1191T123 (1)
M1190T123 (1)
M1189T215 (1)
M1188T293 (1)
M1187T292 (1)
M1185T371 (1)

First Public Date

2025 (9)
2026 (8)
2023 (8)
2014 (6)
2024 (5)
2022 (4)
2017 (2)
2013 (2)
2021 (1)
2019 (1)
2018 (1)
2015 (1)

Classification

bacteria (1)

Modification

6-dioxaoctanediamine derivatized cysteine (1)
2x(15)N labeled L-lysine (1)
4x(15)N labeled L-arginine (1)

Study type

Transcription profiling by array (99)
RNA-seq of coding RNA (5)
Comparative genomic hybridization by array (3)
Unknown experiment type (2)
Methylation profiling by array (2)
Proteomic profiling by array (2)
Methylation profiling by high throughput sequencing (2)
Animal - One-color microarray (1)
ChIP-chip by tiling array (1)
Cell line - High-throughput sequencing (1)
ChIP-seq (1)
RNA-seq of total RNA (1)

Release Date

2022 (77)
2021 (59)
2023 (58)
2024 (55)
2025 (50)
2019 (46)
2020 (44)
2018 (29)
2010 (27)
2014 (25)
2017 (23)
2011 (21)
2012 (20)
2015 (19)
2013 (19)
2016 (18)
2009 (17)
2008 (12)
2026 (8)
2007 (6)
2006 (3)
2005 (2)
2004 (1)
2003 (1)
2002 (1)
2000 (1)

Lab affiliation

Regional Medical Research Centre, Indian Council of Medical Research, Port Blair, India (1)
Dr Madathiparambil G. Madanan, Scientist E, Indian Council of Medical Research, Regional Medical Research Centre, Dollygunj, Port Blair - 744 103, Andaman & Nicobar Islands,INDIA. Phone: Office: +91-3192-251158 Cell: +91-9434284576 (lab head) (1)
Center for Systems Biology and Molecular Medicine Yenepoya Research Centre Yenepoya (Deemed to be University) University Road, Deralakatte Mangalore 575018, India Phone: 0824-2204668 (Ext:2057) (1)
Ruhr-Universität Bochum Institute of Biochemistry and Pathobiochemistry Microbial Biochemistry Universitätsstrasse 150 44780 Bochum, Germany (1)
QTAS, or previously DMPK, Abbvie Bioresearch Center (1)
Department of Chemistry, Boston College (1)
Biochemistry II, Theodor Boveri-Institute, Biocenter, University of Würzburg, 97074 Würzburg, Germany (1)
Professor and Deputy Director, Center for Systems Biology and Molecular Medicine, Yenepoya Research Centre, Yenepoya (Deemed to be University), Mangalore, India (1)
Ruhr-Universität Bochum Institute for Biochemistry and Pathobiochemistry Microbial Biochemistry Universitätsstrasse 150 44780 Bochum Germany (1)
Institute of Clinical Pharmacology, Goethe-University, Frankfurt am Main, Germany (1)
Chemistry Department, Boston College, USA (1)
Department of Brain Sciences, Division of Neuroscience, Imperial College London, London, UK (1)
State Key of Crop Stress Biology in Arid Areas/College of Horticulture, Northwest A&F University, Yangling, Shaanxi, China (1)
Department of Biomedical Sciences, Jepps group, University of Copenhagen, Denmark (lab head) (1)
Professor and Deputy Director Center for Systems Biology and Molecular Medicine Yenepoya Research Centre Yenepoya (Deemed to be University) University Road, Deralakatte Mangalore 575018, India (1)
Scientist E, Indian Council of Medical Research, Regional Medical Research Centre, Dollygunj, Port Blair - 744 103, Andaman & Nicobar Islands,INDIA. Phone: Office: +91-3192-251158 Cell: +91-9434284576 (lab head) (1)
Department of Cardiology, University Medical Center Mainz, Germany (1)
Staff Scientist Biological Systems & Engineering Division Lawrence Berkeley National Laboratory Berkeley CA 94720 (1)
FU Berlin Institut für biologie-mikrobiologie Germany (1)
Department of Chemistry, Boston College, USA (1)
German Cancer Research Center (DKFZ), Heidelberg, Germany Heidelberg University, Medical Faculty, Heidelberg, Germany (1)
Scientist E Regional Medical Research Centre, Indian Council of Medical Research Port Blair, INDIA (1)
College of Horticulture, Northwest A&F University (1)

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Fusobacterium necrophorum DAB

Fusobacterium necrophorum DAB Genome sequencing and assembly

PRJNA232680 | ENA

Transcription profiling of dab hepatocellular adenoma liver tumours (Limanda limanda)

A custome-made 8x15k oligonucleotide limanda limanda microarray (Agilent) comprised of 14919 experimental probes, was used to characterize gene expression profiles of dab hepatocellular adenoma tumours from sites of different pollution status in Irish Sea.

ORGANISM(S): Limanda limanda

2011-11-04 | E-MTAB-734 | biostudies-arrayexpress

HIV DAb-seq of ART-treated individuals

PRJNA1172794 | ENA

HIV DAb-seq of ART-treated individuals

PRJNA1172795 | ENA

Degradation study of lindane by novel strains Kocuria sp. DAB-1Y and Staphylococcus sp. DAB-1W.

Not available

S-EPMC5196013 | biostudies-literature

DAB-quant: An open-source digital system for quantifying immunohistochemical staining with 3,3'-diaminobenzidine (DAB).

Not available

S-EPMC9299305 | biostudies-literature