Dai F F - OmicsDI

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Unknown (4858)
Proteomics (91)
Transcriptomics (88)
Metabolomics (33)
Genomics (12)
Multiomics (1)

Organisms

Homo sapiens (73)
Mus musculus (40)
Arabidopsis thaliana (14)
Rattus norvegicus (10)
Triticum aestivum (5)
Saccharomyces cerevisiae (5)
Glycine max (4)
Apis mellifera (3)
Capsicum annuum (2)
Fusarium graminearum PH-1 (1)
Rosa hybrid cultivar (1)
Arachis hypogaea (1)
Phytophthora sojae (1)
Gossypium hirsutum (1)
Bombyx mori (1)
Hordeum vulgare subsp. spontaneum (1)
Medicago truncatula (1)
Vitis vinifera (1)
Canis lupus familiaris (1)
Aerodramus hirundinaceus (1)
Bos taurus (1)
Candida albicans (1)
Dendrobium huoshanense (1)
Escherichia coli (1)
Escherichia coli RS218 (1)
Pseudomonas aeruginosa PAO1 (1)
Severe acute respiratory syndrome coronavirus 2 (1)
Bacillus subtilis subsp. subtilis str. 168 (1)
Bacillus thuringiensis (1)
Chlamydomonas reinhardtii (1)

Organisms

Gossypium hirsutum (1)
Triticum aestivum (1)

Repository

biostudies-arrayexpress (95)
pride (59)
MetaboLights (32)
iProX (26)
ENA (5)
PAXDB (3)
MassIVE (2)
GNPS (1)
jPOST (1)

Tissue

Cell culture (15)
Plant cell (6)
Liver (4)
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Leaf (3)
Blood plasma (2)
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Rosette (2)
Testis (2)
B cell (1)
Bacteriocyte (1)
Blood (1)
Blood cell (1)
Epithelial cell (1)
Flag leaf (1)
HEK-293T cell (1)
Heart (1)
Neutrophil (1)
Ovary (1)
Pleura (1)
Root (1)
Seed (1)
Seedling (1)
Shoot (1)
Sperm (1)
Stem cell (1)
Stomach (1)
Urine (1)
Whole body (1)

Disease

Leukemia (1)
Normal (1)
Adult hepatocellular carcinoma (1)
Brain cancer (1)
Brain glioblastoma multiforme (1)
Breast cancer (1)
Chronic bronchitis (1)
Disease free (1)
Hepatocellular carcinoma (1)
Laryngeal squamous cell carcinoma (1)
Stomach disease (1)

Technology Type

Mass Spectrometry (59)
Shotgun proteomics (29)
Mass spectrometry (27)
Bottom-up proteomics (12)
Affinity purification coupled with mass spectrometry proteomics (5)
Data-dependent acquisition (5)
Data-independent acquisition (5)
Mass spectrometry assay (4)
Gel-based experiment (4)
NMR spectroscopy (3)
Chemical cross-linking coupled with mass spectrometry proteomics (2)
SWATH MS (2)
Top-down proteomics (2)
DiaPASEF (1)
Metaproteomics (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (18)
Liquid Chromatography MS - negative - reverse phase (13)
Nuclear Magnetic Resonance (NMR) - (3)
Gas Chromatography MS - positive (2)
Liquid Chromatography MS - alternating - reverse-phase (2)
Liquid Chromatography MS - negative - hilic (2)
Illumina HiSeq 2000 (1)
LTQ FT (1)
MaXis (1)
Exactive Plus (1)
Q Exactive (1)
API 4000 QTRAP (AB Sciex) (1)
Agilent 5975E GC/MSD (Agilent) (1)
Flow injection analysis MS – POS (1)
Liquid Chromatography MS - Negative (LC-MS (Negative)) (1)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (1)
Liquid Chromatography MS - positive (1)
Liquid Chromatography MS - positive - hilic (1)
Liquid Chromatography MS – NEG (1)
Liquid Chromatography MS – POS (1)
Liquid Chromatography Tandem MS (LC-MS/MS) (1)
Quattro micro API (Waters) (1)
Xevo QTof MS (Waters) (1)

Publication Date

2023 (36)
2014 (17)
2010 (17)
2024 (15)
2015 (15)
2022 (14)
2026 (13)
2025 (13)
2011 (12)
2009 (11)
2021 (10)
2013 (9)
2017 (8)
2016 (7)
2019 (6)
2020 (5)
2018 (5)
2008 (4)
2012 (2)

UNIPROT ID/AC

1FEH1_WHEAT (3)
4565.Traes_1AL_00485097A.2 (3)
4565.Traes_1AL_014F29DA6.1 (3)
4565.Traes_1AL_0226AAD07.1 (3)
4565.Traes_1AL_08A2F5FA4.1 (3)
4565.Traes_1AL_0D04C9A2A.2 (3)
4565.Traes_1AL_0EF508307.1 (3)
4565.Traes_1AL_0F92F56F8.1 (3)
4565.Traes_1AL_121B2E9AD.1 (3)
4565.Traes_1AL_12797F0CA.1 (3)
4565.Traes_1AL_136EC2A52.1 (3)
4565.Traes_1AL_13DBBA098.1 (3)
4565.Traes_1AL_148233785.1 (3)
4565.Traes_1AL_1DC9BD199.1 (3)
4565.Traes_1AL_24185F4B6.1 (3)
4565.Traes_1AL_255FF48FC.2 (3)
4565.Traes_1AL_25D27E7E2.1 (3)
4565.Traes_1AL_262C70465.1 (3)
4565.Traes_1AL_262C704651.1 (3)
4565.Traes_1AL_2739910A5.1 (3)
4565.Traes_1AL_2BCF4423A.1 (3)
4565.Traes_1AL_2D4B01C64.1 (3)
4565.Traes_1AL_2D9BC6EE1.1 (3)
4565.Traes_1AL_2EF38544E.1 (3)
4565.Traes_1AL_319447519.1 (3)
4565.Traes_1AL_335CA216E.1 (3)
4565.Traes_1AL_387FCF604.1 (3)
4565.Traes_1AL_38B69CE81.1 (3)
4565.Traes_1AL_3B838C090.1 (3)
4565.Traes_1AL_3CF82DD08.2 (3)

CHEBI ID

CHEBI:16704 (10)
CHEBI:17368 (10)
CHEBI:16235 (9)
CHEBI:16359 (9)
CHEBI:16610 (9)
CHEBI:17568 (9)
CHEBI:17596 (9)
CHEBI:28865 (9)
CHEBI:30915 (8)
CHEBI:15354 (7)
CHEBI:15428 (7)
CHEBI:15741 (7)
CHEBI:15891 (7)
CHEBI:15940 (7)
CHEBI:16027 (7)
CHEBI:16467 (7)
CHEBI:16708 (7)
CHEBI:16750 (7)
CHEBI:17154 (7)
CHEBI:17351 (7)
CHEBI:17687 (7)
CHEBI:17750 (7)
CHEBI:30769 (7)
CHEBI:32816 (7)
CHEBI:80774 (7)
CHEBI:15676 (6)
CHEBI:15760 (6)
CHEBI:15971 (6)
CHEBI:16325 (6)
CHEBI:16811 (6)

Metabolite Name

Guanine (7)
Hypoxanthine (7)
Choline (5)
L-Arginine (5)
Spermidine (5)
Uracil (5)
Adenine (4)
Adenosine (4)
Cholic acid (4)
Creatine (4)
Glycine (4)
Guanosine (4)
Inosine (4)
Taurine (4)
Thymidine (4)
Tyramine (4)
Urocanic acid (4)
(9R,13R)-1a,1b-dihomo-jasmonic acid (3)
5'-Methylthioadenosine (3)
7-Methylinosine (3)
Acetoin (3)
Acetylcholine (3)
Adrenochrome (3)
Allopurinol (3)
Argininosuccinic acid (3)
Aspirin (3)
Betaine (3)
CA (3)
CDCA (3)
Cholesterol (3)

First Public Date

2015 (3)
2025 (1)
2020 (1)

Modification

4x(2)H labeled dimethylated L-lysine (2)
15.994915 (1)
57.021464 (1)
6x(2)H labeled dimethylated L-arginine (1)

Study type

Transcription profiling by array (67)
RNA-seq of coding RNA (9)
Methylation profiling by high throughput sequencing (4)
RNA-seq of non coding RNA (4)
ChIP-seq (3)
Other (2)
Unknown experiment type (1)
Animal - One-color microarray (1)
Cell line - One-color microarray (1)
RNAi profiling by array (1)
Comparative genomic hybridization by array (1)
MicroRNA profiling by array (1)

Release Date

2025 (796)
2022 (649)
2024 (608)
2023 (589)
2021 (514)
2020 (390)
2019 (255)
2018 (224)
2017 (172)
2016 (149)
2015 (128)
2026 (120)
2014 (103)
2013 (65)
2012 (52)
2011 (42)
2010 (42)
2009 (24)
2008 (12)
2007 (7)
2005 (3)
2002 (3)
2006 (2)
2003 (2)
2004 (1)
1998 (1)

Lab affiliation

Division of Life Science, The Hong Kong University of Science and Technology, Hong Kong SAR, China (2)
Hong Kong University of Science and Technology (2)
Anonymity for double-blind review (1)
BGI-Shenzhen (1)
Center of Growth, Metabolism and Aging, Key Laboratory of Bio-Resource and Eco-Environment of Ministry of Education, College of Life Sciences, Sichuan University, Chengdu, 610064, China (1)
ChongQing Medical University (1)
College of Horticulture, Hunan Agricultural University (1)
Department of Andrology, The First Affiliated Hospital, Sun Yat-sen University, Guangzhou, 510080, China (1)
Department of Biochemistry, University of Washington, Seattle WA USA (1)
Department of Biology, School of Life Sciences, Southern University of Science and Technology, Shenzhen, China (1)
Department of Cancer Immunology, Institute for Cancer Research, Oslo University Hospital Radiumhospitalet, Oslo, Norway Institute of Clinical Medicine, University of Oslo, Oslo, Norway (1)
Department of Cellular Biology, University of Georgia, Athens, GA 30602 (1)
Department of Pharmaceutical Sciences, School of Pharmacy, University of Maryland, Baltimore (1)
Department of Plant Systems Biology, VIB, 9052 Ghent, Belgium Department of Plant Biotechnology and Bioinformatics, Ghent University, 9052 Ghent, Belgium (1)
Department of Radiation Oncology, Nanfang Hospital, Southern Medical University (1)
Division of Life Science, The Hong Kong University of Science and Technology (1)
Henan Institute of Medical and Pharmaceutical Sciences, Zhengzhou University (1)
Huazhong University of Science and Technology (1)
Institute of Nephrology and Blood Purification, The First Affiliated Hospital of Jinan University, Jinan University, Guangzhou 510632, China (1)
Institute of Plant Protection – National Research Institute, Department of Entomology, Animal Pests and Biotechnology, Władysława Węgorka 20, 60-318 Poznań, Poland (1)
LIFE Science, HKUST (1)
Laboratoire de Chimie Bacterienne, UMR7283 CNRS-AMU, 31 Chemin Joseph Aiguier, 13009 Marseille, France (1)
Laboratory of Metabolomics and Drug-induced Liver Injury, Department of Gastroenterology & Hepatology, Frontiers Science Center for Disease-related Molecular Network, West China Hospital, Sichuan University, Chengdu (1)
Laboratory of Molecular Oncology, Frontiers Science Center for Disease-related Molecular Network, State Key Laboratory of Biotherapy and Cancer Center, West China Hospital, Sichuan University, Chengdu 610041, China. (1)
MOE Key Laboratory of Bioinformatics, School of Life Sciences, Tsinghua University, Beijing, China (1)
Manchester Institute of Biotechnology School of Natural Schiences University of Manchester M1 7DN Manchester United Kingdom (1)
National Chengdu Center for Safety Evaluation of Drugs, State Key Laboratory of Biotherapy/Collaborative Innovation Center for Biotherapy, West China Hospital, Sichuan University (1)
Nephrology Department of Guilin No.924 Hospital, Guangxi Key Laboratory of Metabolic Diseases Research, Guilin Key laboratory of Kidney Diseases Research; Clinical Medical Research Center, The Second Clinical Medical College of Jinan University (Shenzhen People’s Hospital) (1)
No.892, Yuanda 2 Road, furong district, changsha，Hunan province (1)
Reproductive and Genetic Hospital of CITIC-XIANGYA (1)

Tags

xref:PubMed:26484265 (1)
xref:PubMed:25690694 (1)
xref:EuropePMC:PMC8379876 (1)
xref:EuropePMC:PMC12441072 (1)
xref:EuropePMC:PMC5806312 (1)

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Molecular characterization of a Fus3/Kss1 type MAPK from Puccinia striiformis f. sp. tritici, PsMAPK1.

Not available

S-EPMC3136484 | biostudies-literature

Genetic polymorphisms of pharmacogenomic VIP variants in the Dai population from Yunnan province.

Not available

S-EPMC7336744 | biostudies-literature

The F-box protein SLOW MOTION regulates hypocotyl growth in Arabidopsis

Here, in a time-course phosphoproteome analysis on Arabidopsis seedlings exposed to control or high ambient temperature, we observed reduced levels of diverse proteins over time, which could be in part due to transcription, translation and/or degradation. In addition, we observed differential phosph...

ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress)

2025-05-26 | PXD035922 | Pride

SNRPD1/E/F/G Serve as Potential Prognostic Biomarkers in Lung Adenocarcinoma.

Not available

S-EPMC8959887 | biostudies-literature

short-term effect of N and S supply shifts on gene expression in wheat grain

Nitrogen and Sulfur supply play an important role in modulating wheat grain development. We studied the short-term effect of shifting N and S supply levels at mid-way through grain filling on gene expression by microarray analysis. Please note: Factor Value[sampling time]: indicates when the samples...

ORGANISM(S): Triticum aestivum

2015-06-01 | E-MTAB-1920 | biostudies-arrayexpress

The acetylome regulators Hdac1 and Hdac2 differently modulate intestinal epithelial cell dependent homeostatic responses in experimental colitis

Histone deacetylases (Hdac) remove acetyl groups from proteins, influencing global and specific gene expression. Hdacs control inflammation, as shown by Hdac inhibitor-dependent protection from DSS-induced murine colitis. While tissue-specific Hdac knockouts show redundant and specific functions, li...

ORGANISM(S): Mus musculus

2014-02-08 | E-GEOD-54785 | biostudies-arrayexpress

Solid base catalysts derived from Ca-Al-X (X = F^-, Cl^- and Br^-) layered double hydroxides for methanolysis of propylene carbonate.

Not available

S-EPMC9076883 | biostudies-literature

Lectotypification of the name Melastoma candidum f. albiflorum and its taxonomic status.

Not available

S-EPMC7228939 | biostudies-literature

Isolation, Identification and Hyperparasitism of a Novel Cladosporium cladosporioides Isolate Hyperparasitic to Puccinia striiformis f. sp. tritici, the Wheat Stripe Rust Pathogen.

Not available

S-EPMC9219750 | biostudies-literature

F. prausnitzii-derived extracellular vesicles attenuate experimental colitis by regulating intestinal homeostasis in mice.