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TranscriptomicsTranscription profiling of barley leaves after boron reveals a late response to boron toxicity
Barley1 GeneChip was used to investigate transcriptome changes associated with boron (B) toxicity in a sensitive barley cultivar (Hordeum vulgare L. cv. Hamidiye). Eight day old aseptically grown seedlings were subjected to 5 or 10 mM boric acid (B(OH)3) treatments for 5 days and expression profiles...
ORGANISM(S): Hordeum vulgare 
2009-01-31 | E-GEOD-14521 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of Arabidopsis penetration resistance, wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2x2 factorial design
Arabidopsis is a non-host to the biotrophic fungus Blumeria graminis f.sp. hordei (Bgh), effectively hindering Bgh ingress to the epidermal cells by deposition of callosic papillae formations, i.e. penetration resistance. To better understand the transcriptional changes in Arabidopsis towards Bgh, w...
ORGANISM(S): Arabidopsis thaliana 
2008-10-25 | E-GEOD-12856 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of wheat development
The analysis of gene expression during wheat development:; Gene expression measurements were carried out on a developmental tissue; series for wild-type wheat (cv. Chinese Spring) using the Affymetrix; Wheat GeneChip. Thirteen tissues at defined developmental stages were; chosen to match the barley...
ORGANISM(S): Triticum aestivum 
2009-08-15 | E-GEOD-12508 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of grapevine Vitis vinifera cultivars Chardonnay and Incrocio Manzoni naturally infected with Bois Noir phytoplasma compared to healthy samples
Transcriptional changes in field-grown plants of Vitis Vinifera cultivars 'Chardonnay' and 'Incrocio Manzoni' naturally infected with Bois Noir phytoplasma, compared to healthy samples. SUBMITTER_CITATION: Albertazzi G., Caffagni A., Milc J.A., Francia E., Roncaglia E., Ferrari F., Tagliafico E., S...
ORGANISM(S): Vitis vinifera 
2009-11-16 | E-GEOD-12842 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of maize to evaluate target preparation methods for single-feature polymorphism detection in large complex plant genomes
We tested four gene enrichment and complexity reduction target preparation methods for scoring SFPs on the Affymetrix GeneChip 18k Maize Genome Array (“Maize GeneChip”). Methylation filtration (MF), Cot filtration (CF), mRNA-derived cRNA, and amplified fragment length polymorphism (AFLP) method...
ORGANISM(S): Zea mays 
2008-10-25 | E-GEOD-12770 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of barley Steptoe x Morex seedling leaf comparison
This study was to collect expression level polymorphism (ELP) data for the barley genotypes Steptoe and Morex, parents of a widely used North American mapping population. Primarily, the data collected will show the amount of variation between these genotypes in seedling leaves grown in a greenhouse...
ORGANISM(S): Hordeum vulgare 
2008-06-18 | E-GEOD-11182 | biostudies-arrayexpress
TranscriptomicsComparison of transcriptional responses of two susceptible rice cultivars to strains of Xanthomonas oryzae
X. oryzae pv. oryzae (Xoo) is the causal agent of bacterial blight of rice. X. oryzae pv. oryzicola (Xoc) is the causal agent of bacterial streak of rice. Fourteen day old rice leaves were inoculated with one of five strains of Xanthomonas oryzae. Seven strains of Xoo were used; three wild type st...
ORGANISM(S): Oryza sativa 
2012-03-06 | E-GEOD-36272 | biostudies-arrayexpress
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