Davies G G - OmicsDI

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Unknown (3111)
Genomics (76)
Proteomics (76)
Transcriptomics (52)
Metabolomics (13)

Organisms

Homo sapiens (132)
Mus musculus (27)
Sus scrofa (6)
Drosophila melanogaster (3)
Pseudomonas aeruginosa (2)
Escherichia coli (2)
Klebsiella pneumoniae (2)
Klebsiella variicola (2)
Rhipicephalus pulchellus (2)
Staphylococcus aureus (2)
Streptococcus pyogenes (2)
Bacillus cereus (1)
Solanum tuberosum (1)
Arabidopsis thaliana (1)
Agathobacter rectalis (1)
Arthrobacter sp. S2 (1)
BK polyomavirus MM (1)
Bacteria (1)
Betacoronavirus (1)
Betaherpesvirinae (1)
Burkholderia cenocepacia (1)
Burkholderia cenocepacia H111 (1)
Cytomegalovirus (1)
Fungi (1)
Helicoverpa armigera (1)
Human alphaherpesvirus 1 (1)
Human herpesvirus 5 strain Merlin (1)
Orthopoxvirus vaccinia (1)
Rattus rattus (1)
Rhipicephalus microplus (1)

Organisms

Pseudomonas aeruginosa (2)
Homo sapiens (2)

Repository

EGA (69)
pride (64)
biostudies-arrayexpress (54)
MetaboLights (13)
MassIVE (8)
ENA (5)
PeptideAtlas (2)
jPOST (1)
PanoramaPublic (1)

Tissue

Cell culture (23)
Brain (9)
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Kidney (5)
Embryonic cell (3)
Permanent cell line cell (3)
Blood plasma (2)
Blood serum (2)
Feces (2)
Heart (2)
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Neuron of the forebrain (2)
Female Reproductive System (1)
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Colon (1)
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Electrically active cell (1)
Embryo (1)
Embryonic kidney cell line (1)
Endothelial cell of artery (1)
Epithelial cell (1)

Disease

Porphyria NOS (2)
Alzheimer's disease (2)
Disease free (2)
Neuroblastoma (2)
Parkinson's disease (2)
Ductal breast cancer (1)
Normal (1)
High Grade Ovarian Serous Adenocarcinoma (1)
Acute leukemia (1)
Acute myeloid leukemia (1)
Brain cancer (1)
COVID-19 (1)
Childhood extraosseous osteosarcoma (1)
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Colon cancer (1)
Coronavirus infectious disease (1)
Embryonal rhabdomyosarcoma (1)
Fibrosarcoma (1)
Glioblastoma (1)
Head and neck cancer (1)
Hereditary spastic paraplegia 47 (1)
Hereditary spastic paraplegia 50 (1)
Hereditary spastic paraplegia 51 (1)
Hereditary spastic paraplegia 52 (1)
Huntington Disease (1)
Lung carcinoma (1)
Malignant mesothelioma (1)
Melanoma (1)

Technology Type

Mass Spectrometry (64)
Shotgun proteomics (40)
Affinity purification coupled with mass spectrometry proteomics (11)
Mass spectrometry (7)
Bottom-up proteomics (7)
Gel-based experiment (6)
NMR spectroscopy (5)
Data-dependent acquisition (5)
SWATH MS (5)
Illumina HiSeq 2000 (3)
Data-independent acquisition (2)
HDMSE (2)
SRM/MRM (2)
Illumina Genome Analyzer II, Illumina HiSeq 2000 (1)
Illumina HiSeq 2000, Affymetrics_SNP_6.0- (1)
Illumina HiSeq 2500 (1)
Illumina HiSeq 2500, ILLUMINA (1)
Illumina HiSeq 4000, ILLUMINA (1)
Mass spectrometry assay (1)
All-ion fragmentation (1)
MSE (1)
Metaproteomics (1)

Instrument Platform

LTQ Orbitrap Velos (4)
Liquid Chromatography MS - positive - reverse phase (4)
Q Exactive (3)
NextSeq 500 (2)
LTQ Orbitrap Elite (2)
LTQ Orbitrap XL (2)
MaXis (2)
Bruker (2)
Gas Chromatography MS - positive (2)
Liquid Chromatography MS - positive - hilic (2)
Nuclear Magnetic Resonance (NMR) - (2)
GenePix 4000B [Axon Instruments] (1)
Illumina HiSeq 1500 (1)
Illumina HiSeq 2500 (1)
Illumina HiSeq 4000 (1)
LTQ Velos (1)
Orbitrap Fusion (1)
Direct infusion MS - negative (1)
Liquid Chromatography MS - Negative (LC-MS (Negative)) (1)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (1)
Liquid Chromatography MS - alternating - hilic (1)
Nuclear Magnetic Resonance (NMR) (1)
Varian (1)

Publication Date

2021 (21)
2019 (13)
2023 (12)
2025 (11)
2014 (10)
2020 (10)
2018 (9)
2024 (7)
2009 (6)
2010 (5)
2005 (5)
2016 (4)
2011 (4)
2026 (4)
2022 (4)
2015 (3)
2012 (3)
2008 (3)
2007 (3)
2006 (2)
2017 (2)
2013 (1)
2004 (1)

UNIPROT ID/AC

A0A024R563 (2)
A0A024R8H9 (2)
A0A024RAN2 (2)
A0A024RC46 (2)
A0A087WT59 (2)
A0A087WTX5 (2)
A0A087WVW2 (2)
A0A087WWK8 (2)
A0A087WYL9 (2)
A0A087WZE9 (2)
A0A087X130 (2)
A0A087X1V9 (2)
A0A087X232 (2)
A0A0A0MR66 (2)
A0A0A0MS07 (2)
A0A0A0MS51 (2)
A0A0A0MSA7 (2)
A0A0C4DG89 (2)
A0A0C4DGT3 (2)
A0AVT1 (2)
A0FGR8 (2)
A0FGR8-2 (2)
A0FGR8-6 (2)
A0JLT2 (2)
A0JNW5 (2)
A0M8Q6 (2)
A0MZ66 (2)
A0N5G5 (2)
A1IGU5 (2)
A1L020 (2)

ENSEMBL ID

ENSG00000147251 (2)
ENSG00000204131 (2)
ENSG00000229353 (2)
ENSG00000247315 (2)
ENSG00000170477 (1)

CHEBI ID

CHEBI:15366 (7)
CHEBI:16449 (7)
CHEBI:15741 (6)
CHEBI:78320 (6)
CHEBI:15354 (4)
CHEBI:16919 (4)
CHEBI:18186 (4)
CHEBI:25017 (4)
CHEBI:27266 (4)
CHEBI:28044 (4)
CHEBI:30751 (4)
CHEBI:15428 (3)
CHEBI:15891 (3)
CHEBI:16199 (3)
CHEBI:16530 (3)
CHEBI:16737 (3)
CHEBI:16811 (3)
CHEBI:17822 (3)
CHEBI:18237 (3)
CHEBI:18257 (3)
CHEBI:24898 (3)
CHEBI:25094 (3)
CHEBI:26271 (3)
CHEBI:28300 (3)
CHEBI:30768 (3)
CHEBI:7916 (3)
CHEBI:15347 (2)
CHEBI:15603 (2)
CHEBI:15724 (2)
CHEBI:15753 (2)

Metabolite Name

Alanine (4)
Succinic acid (4)
Phenylalanine (3)
Tyrosine (3)
2-oxoisocaproic acid (2)
3-amino-2-piperidone (2)
Acetamide (2)
Acetate (2)
Acetate (2)
Acetic acid (2)
Acetone (2)
Alanine (2)
Beta-alanine (2)
Butyric acid (2)
Choline (2)
Creatine (2)
Creatinine (2)
D-fructose (2)
D-gluconic acid (2)
D-glucose (2)
Ethanol (2)
Formic acid (2)
Glutamine (2)
Glycine (2)
Isoleucine (2)
L-aspartic acid (2)
L-glutamine (2)
Lactate (2)
Leucine (2)
Valine (2)

First Public Date

2022 (2)
2014 (2)
2020 (1)

Classification

bacteria (2)

Study type

Transcription profiling by array (36)
Genotyping by array (3)
Capture-C (3)
RNA-seq of coding RNA from single cells (3)
Comparative genomic hybridization by array (2)
ChIP-seq (2)
Methylation profiling by array (2)
Unknown experiment type (1)
Cell line - High-throughput sequencing (1)
RNA-seq of coding RNA (1)

Release Date

2022 (379)
2021 (365)
2023 (302)
2025 (278)
2024 (275)
2020 (254)
2019 (216)
2018 (212)
2017 (164)
2016 (142)
2015 (137)
2014 (100)
2013 (67)
2012 (55)
2011 (41)
2026 (39)
2009 (33)
2010 (30)
2008 (21)
2005 (14)
2007 (12)
2006 (8)
2004 (5)
2001 (5)
2002 (3)
2000 (3)
2003 (2)
1999 (2)
1998 (1)

Lab affiliation

Bioplatforms Australia (7)
Cambridge Institute for Medical Research, University of Cambridge, Hills Road, Cambridge, CB2 0XY, UK (4)
Department of Microbiology and Immunology, University of Melbourne at the Peter Doherty Institute for Infection and Immunity, Melbourne 3000, Australia (2)
Department of Neurobiology, Boston Children's Hospital, Harvard Medical School, Boston, MA, USA (2)
Department of Proteomics and Signal Transduction, Max Planck Institute of Biochemistry, Martinsried, Germany (2)
1Department of Biomedical Sciences, University of Copenhagen, Copenhagen, Denmark (1)
Amphista Therapeutics Cambridge United Kingdom (1)
Bioplatforms Australia (project manager) (1)
Cambridge Institute for Medical Research, University of Cambridge (1)
Cambridge Institute for Medical Research, University of Cambridge, CB2 0XY, UK (1)
Cellular & Molecular Medicine, University of Bristol, United Kingdom (1)
Centre for Cancer Biology, University of South Australia and SA Pathology, Adelaide, SA, Australia Adelaide Medical School, Faculty of Health and Medical Sciences, The University of Adelaide, Adelaide, SA, Australia (1)
Centre for Proteomic Research, University of Southampton (1)
Department of Biochemistry and Functional Proteomics, Institute of Biology II, Faculty of Biology and BIOSS Centre for Biological Signalling Studies, University of Freiburg, 79104 Freiburg im Breisgau, Germany (1)
Department of Chemistry Center for Gastrointestinal Biology and Disease Integrated Program for Biological and Genome Sciences University of North Carolina at Chapel Hill (1)
Department of Clinical science, Faculty of Medicine, University of Bergen (1)
Department of Molecular Medicine, The Scripps Research Institute, La Jolla, CA, USA (1)
Department of Neuroscience , Tufts University (1)
Department of Neuroscience, Tufts University School of Medicine (1)
Department of Paediatrics and the Weatherall Institute of Molecular Medicine, University of Oxford, Oxford, United Kingdom. (1)
Department of Proteomics and Signal Transduction, Max Planck Institute of Biochemistry, Martinsried (1)
Departments of Biology and Chemistry, Vanderbilt University, USA (1)
Departments of Chemistry, Biological Sciences, Microbiology and Immunology, Vanderbilt University (1)
Departments of Chemistry, Biological Sciences, Pathology, Microbiology and Immunology, Vanderbilt University (1)
Discovery Proteomics Facility University of Oxford Target Discovery Institute, NDMRB Oxford, OX3 7FZ (1)
Institute of Cancer and Genomic Sciences, University of Birmingham, UK (1)
Institute of Molecular Biology (IMB) (1)
King's British Heart Foundation Centre, King's College London, London, United Kingdom (1)
Max Planck Institute of Biochemistry Department of Proteomics and Signal Transduction Am Klopferspitz 18 82152 Martinsried, Germany (1)
Principal Scientist and Chair, Biochemical Sciences Division, CSIR-National Chemical Laboratory, Pune, INDIA (1)

Tags

xref:PubMed:35710802 (2)
pathogen:bacterium (2)
pathogen (2)
xref:PubMed:22931250 (1)
xref:PubMed:21696457 (1)

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Functional gene group analysis indicates no role for heterotrimeric G proteins in cognitive ability.

Not available

S-EPMC3953514 | biostudies-literature

DNA G-Quadruplex Is a Transcriptional Control Device That Regulates Memory.

Not available

S-EPMC11007313 | biostudies-literature

The role of G-protein receptor 84 in experimental neuropathic pain.

Not available

S-EPMC4461694 | biostudies-literature

The Concise Guide to PHARMACOLOGY 2015/16: G protein-coupled receptors.

Not available

S-EPMC4718210 | biostudies-literature

THE CONCISE GUIDE TO PHARMACOLOGY 2017/18: G protein-coupled receptors.

Not available

S-EPMC5650667 | biostudies-literature

A novel integrative conjugative element mediates genetic transfer from group G Streptococcus to other {beta}-hemolytic Streptococci.

Not available

S-EPMC2655516 | biostudies-literature

Exon capture analysis of G protein-coupled receptors identifies activating mutations in GRM3 in melanoma.

Not available

S-EPMC3376644 | biostudies-literature

Salivary MUC5B Modulation of Glucose Metabolism in Early Oral Biofilms

To investigate how early mono- and dual species biofilms of oral Actinomyces naeslundii and Streptococcus gordonii clinical isolates metabolized glucose in the presence of the complex salivary mucin MUC5B, this study employed NMR-based metabolomics with interpretation of network integration. Untarge...

2024-09-11 | MTBLS10078 | MetaboLights

THE CONCISE GUIDE TO PHARMACOLOGY 2019/20: G protein-coupled receptors.

Not available

S-EPMC6844580 | biostudies-literature

Microcolony formation by the opportunistic pathogen Pseudomonas aeruginosa requires pyruvate and pyruvate fermentation.

A hallmark of the biofilm architecture is the presence of microcolonies. However, little is known about the underlying mechanisms governing microcolony formation. In the human pathogen Pseudomonas aeruginosa, microcolony formation is dependent on the two-component regulator MifR, with mifR mutant bi...

ORGANISM(S): Pseudomonas aeruginosa

2012-04-30 | E-GEOD-35286 | biostudies-arrayexpress

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3328 Results

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Organisms

Organisms

Repository

Tissue

Disease

Technology Type

Instrument Platform

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UNIPROT ID/AC

ENSEMBL ID

CHEBI ID

Metabolite Name

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Study type

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Lab affiliation

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