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GenomicsTrans Chromosomal Methylation in Arabidopsis hybrids
The heterotic hybrid offspring of Arabidopsis accessions C24 and Landsberg erecta have altered methylomes. Changes occur most frequently at loci where parental methylation levels are different. There are context-specific biases in the non-additive methylation patterns with mCG generally increased ...
ORGANISM(S): Arabidopsis thaliana 
2012-02-05 | E-GEOD-35542 | biostudies-arrayexpress
TranscriptomicsHybrid Mimics and Hybrid Vigor in Arabidopsis (F4 data)
F1 hybrids can outperform their parents in yield and vegetative biomass, features of hybrid vigor which form the basis of the hybrid seed industry. The yield advantage of the F1 is lost in the F2 and subsequent generations. In Arabidopsis, from F2 plants which have a F1€“like phenotype, we have by...
ORGANISM(S): Arabidopsis thaliana 
2015-08-17 | E-GEOD-64740 | biostudies-arrayexpress
TranscriptomicsG-CSF receptor targeting in inflammatory arthritis
G-CSF is a hemopoietic growth factor that has a role in steady state granulopoiesis, as well as in mature neutrophil activation and function. We developed a neutralizing monoclonal antibody to the murine G-CSF receptor (G-CSFR), which antagonizes binding of murine G-CSF and inhibits G-CSFR signallin...
ORGANISM(S): Mus musculus 
2016-01-19 | E-GEOD-76966 | biostudies-arrayexpress
MetabolomicsSpecific decorations of 17-hydroxygeranyllinalool diterpene glycosides solve the autotoxicity problem of chemical defense in Nicotiana attenuata
The native diploid tobacco Nicotiana attenuata produces abundant, potent anti-herbivore defense metabolites known as 17-hydroxygeranyllinalool diterpene glycosides (HGL-DTGs) whose glycosylation and malonylation biosynthetic steps are regulated by jasmonate signaling. To characterize the biosyntheti...
2021-10-06 | MTBLS1819 | MetaboLights
TranscriptomicsG9a influences neuronal subtype specification in striatum
Cocaine-mediated repression of the histone methyltransferase (HMT) G9a has recently been implicated in transcriptional, morphological, and behavioral responses to chronic cocaine administration. Here, using a ribosomal affinity purification approach, we find that G9a repression by cocaine occurs in ...
ORGANISM(S): Mus musculus 
2014-02-05 | E-GEOD-54656 | biostudies-arrayexpress
GenomicsChIP-seq for Meis on mouse branchial arches at E11.5.
Meis ChIP-seq on mouse first branchial arch (BA1) and posterior branchial arches connected to outflow tract of the heart (PBA/OFT) at embryonic day (E) 11.5.
ORGANISM(S): Mus musculus 
2020-01-06 | E-MTAB-7767 | biostudies-arrayexpress
TranscriptomicsNaMYC2 transcription factor regulates a subset of plant defense responses in Nicotiana attenuata
Identification of significantly altered transcripts in Nicotiana attenuata plants with reduced MYC2 expression after induction with oral secretions of Manduca sexta larvae. Gene expression in leaves of Nicotiana attenuata EV and MYC2_VIGS plants was measured at 1 hour after induction with oral secre...
ORGANISM(S): Nicotiana attenuata 
2013-05-17 | E-GEOD-45608 | biostudies-arrayexpress
GenomicsChIP-seq for Gata6 and histone H3K27Ac on mouse branchial arches at E11.5.
Gata6 ChIP-seq on mouse posterior branchial arches connected to outflow tract of the heart (PBA/OFT) at embryonic day (E) 11.5. H3K27Ac ChIP-seq on mouse second branchial arch (BA2) and posterior branchial arches connected to outflow tract of the heart (PBA/OFT) at embryonic day (E) 11.5.
ORGANISM(S): Mus musculus 
2017-09-25 | E-MTAB-5407 | biostudies-arrayexpress
UnknownCirculating microRNAs in Sera Correlate with Soluble Biomarkers of Immune Activation but Do Not Predict Mortality in ART Treated Individuals with HIV-1 Infection: A Case Control Study.
Not available
S-EPMC4605674 | biostudies-literature
OtherSystems-based analysis of Arabidopsis leaf growth reveals adaptation to water deficit.
PRIDE ID: 21331, ae1_5: PE47_1, PE48_1, PE5_4, PE6_4, PE7_4, PE8_4, control_25, control_26. Data published as part of Mol Syst Biol. 2012, 8:606 . From the Abstract: {{i}} ... To reveal the dynamic systems behaviour of leaf development, we profiled Arabidopsis leaf number six in depth at four diffe...
ORGANISM(S): Thale_cress 
GPM11210004321 | GPMDB
Resource Reanalysis 
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