De Simone C A CA

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Unknown (121)
Transcriptomics (24)
Metabolomics (3)
Genomics (1)
Proteomics (1)

Organisms

Homo sapiens (12)
Mus musculus (9)
Hypomesus transpacificus (1)
Tuber melanosporum (1)
Saccharomyces cerevisiae (1)
Sus scrofa (1)
Arabidopsis thaliana (1)

Repository

biostudies-arrayexpress (25)
MetaboLights (3)
pride (1)

Tissue

Saliva (1)

Disease

Systemic mastocytosis (1)

Technology Type

Mass spectrometry (3)
Gel-based experiment (1)
Mass Spectrometry (1)

Instrument Platform

NextSeq 500 (2)
Gas Chromatography MS - positive (2)
Illumina HiSeq 2500 (1)
Illumina NovaSeq 6000 (1)
Illumina HiSeq 4000 (1)
Direct infusion MS - (1)
Flow injection analysis MS - (1)
Liquid Chromatography MS - positive (1)
Liquid Chromatography MS/MS - positive (1)

Publication Date

2015 (6)
2023 (3)
2021 (3)
2020 (3)
2013 (3)
2016 (2)
2014 (2)
2025 (1)
2012 (1)
2011 (1)
2009 (1)
2008 (1)
2005 (1)
2004 (1)

CHEBI ID

CHEBI:15366 (2)
CHEBI:15428 (2)
CHEBI:16113 (2)
CHEBI:16449 (2)
CHEBI:16811 (2)
CHEBI:16857 (2)
CHEBI:17890 (2)
CHEBI:17987 (2)
CHEBI:18186 (2)
CHEBI:25094 (2)
CHEBI:27570 (2)
CHEBI:28044 (2)
CHEBI:28837 (2)
CHEBI:29016 (2)
CHEBI:30813 (2)
CHEBI:49000 (2)
CHEBI:10022 (1)
CHEBI:10075 (1)
CHEBI:10137 (1)
CHEBI:10366 (1)
CHEBI:10368 (1)
CHEBI:10432 (1)
CHEBI:11750 (1)
CHEBI:121564 (1)
CHEBI:12427 (1)
CHEBI:125536 (1)
CHEBI:12777 (1)
CHEBI:131691 (1)
CHEBI:131692 (1)
CHEBI:131743 (1)

Metabolite Name

Benzyl alcohol (2)
Decanoic acid (2)
Octanoic acid (2)
(+)-(1R,2R)-1,2-Diphenylethane-1,2-diol (1)
(+)-Isoxanthochymol (1)
(+)-O-Methylarmepavine (1)
(+)-Setoclavine (1)
(+)-Zeylenol (1)
(+-)-(Z)-2-(5-Tetradecenyl)cyclobutanone (1)
(+-)-3-Hydroxynonanoic acid (1)
(+-)-Anisoxide (1)
(+-)-threo-1-(p-Hydroxyphenyl)propylene glycol 4'-glucoside (1)
(+/-)-3-[(2-methyl-3-furyl)thio]-2-butanone (1)
(-)-Epiafzelechin 3-gallate (1)
(-)-Gossypol (1)
(-)-Nopol (1)
(-)-erythro-Anethole glycol 1-glucoside (1)
(-)-trans-Carveol (1)
(-)-trans-Carveol glucoside (1)
(10S,11S)-Pterosin C (1)
(12S,15S)-15-O-Demethyl-10,29-dideoxy-11,12-dihydro-striatin C (1)
(1R,3R,4R,5S,6S,8x)-1-Acetoxy-8-angeloyloxy-3,4-epoxy-5-hydroxy-7(14),10-bi... (1)
(1R,3S,4S,6R)-6,9-Dihydroxyfenchone 6-O-b-D-glucoside (1)
(1Z,4Z)-1,5-bis(4-hydroxyphenyl)-1,4-pentadiene (1)
(1xi,3xi)-1,2,3,4-Tetrahydro-1-methyl-beta-carboline-3-carboxylic acid (1)
(2-Naphthalenyloxy)acetic acid (1)
(20R)-Ginsenoside Rh2 (1)
(2R,2'S)-Isobuteine (1)
(2R,3R,4R)-2-Amino-4-hydroxy-3-methylpentanoic acid (1)
(2R,3S)-Piscidic acid (1)

Study type

Transcription profiling by array (13)
RNA-seq of coding RNA (6)
RNA-seq of coding RNA from single cells (2)
RNA-seq of non coding RNA (2)
Animal - Single-cell sequencing (1)
ChIP-seq (1)

Release Date

2022 (21)
2024 (17)
2023 (16)
2020 (16)
2021 (15)
2025 (13)
2015 (7)
2014 (7)
2013 (6)
2009 (5)
2016 (4)
2012 (4)
2011 (4)
2010 (3)
2008 (2)
2018 (2)
2005 (1)
2004 (1)
2026 (1)
2019 (1)

Lab affiliation

Life and Environmental Sciences Department (Biomedical Section) - University of Cagliari (1)

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Interleukin 28B-related polymorphisms: a pathway for understanding hepatitis C virus infection?

Not available

S-EPMC3831221 | biostudies-literature

Gene expression profiling of peripheral blood mononuclear cells before and after eradication of Hepatitis C virus by DAAs

Remarkable improvements in the treatment of HCV infection have been observed since the availability of HCV Direct-antiviral agents (DAAs). We evaluated by microarray the transcriptomic profile of circulating mononuclear cells from 8 chronic HCV patients at baseline and 12 weeks after the end of 4 w...

ORGANISM(S): Homo sapiens

2023-07-31 | E-MTAB-10952 | biostudies-arrayexpress

Carbonic anhydrase IX subcellular localization in normoxic and hypoxic SH-SY5Y neuroblastoma cells is assisted by its C-terminal protein interaction domain.

Not available

S-EPMC10432983 | biostudies-literature

Redetermination of 4-cyano-pyridine N-oxide.

Not available

S-EPMC3435831 | biostudies-literature

In vivo targeting of de novo DNA methylation by histone modifications in yeast and mouse (ChIP-Seq yeast)

Methylation of cytosines (5meC) is a widespread heritable DNA modification. During mammalian development, two global demethylation events are followed by waves of de novo DNA methylation. In vivo mechanisms of DNA methylation establishment are largely uncharacterized. Here we use Saccharomyces cerev...

ORGANISM(S): Saccharomyces cerevisiae

2015-04-02 | E-GEOD-66909 | biostudies-arrayexpress

2-(2-Nitro-anilino)-5,6,7,8-tetra-hydro-4H-cyclo-hepta-[b]thio-phene-3-carbonitrile.

Not available

S-EPMC2979624 | biostudies-literature

trans-5,6-Diphenyl-perhydro-pyran-2,4-dione.

Not available

S-EPMC2968273 | biostudies-literature

2-(4-Methyl-phen-yl)-1H-anthraceno[1,2-d]imidazole-6,11-dione: a fluorescent chemosensor.

Not available

S-EPMC2977743 | biostudies-literature

3-(2,4-Dibromo-anilino)-2,2-dimethyl-2,3-dihydro-naphtho[1,2-b]furan-4,5-dione: a new substituted aryl-amino nor-β-lapachone derivative.