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TranscriptomicsDesign and testing of genome-proxy microarrays to profile marine microbial communities
Microarrays are useful tools for detecting and quantifying specific functional and phylogenetic genes in natural microbial communities. In order to track uncultivated microbial genotypes and their close relatives in an environmental context, we designed and implemented a “genome proxy” microarra...
ORGANISM(S): marine metagenome 
2010-05-25 | E-GEOD-9384 | biostudies-arrayexpress
ProteomicsP-VIS: internally-controlled validation of mass spectrometry-based peptide identifications
Peptide-Spectrum Match (PSM) Validation with Internal Standards (P-VIS) is an objective approach to validating individual PSMs. A biological sample is analyzed by LC-MS/MS and the data are searched using a traditional approach such as a database search or de novo sequencing. A PSM of interest is ide...
ORGANISM(S): Homo sapiens (Human) Mus musculus (Mouse) 
2020-09-21 | PXD020901 | Pride
Peptidomics Hybrid insulin peptides Peptide-spectrum match Post-translational modification Validation Immunotherapy Peptide splicing Immunopeptidomics 
UnknownScreening of a fosmid library of marine environmental genomic DNA fragments reveals four clones related to members of the order Planctomycetales.
Not available
S-EPMC106819 | biostudies-literature
ProteomicsProteomics of Enriched Insulin Secretory Granules Fractionated by Size Exclusion Chromotography
Hybrid insulin peptides (HIPs) form in pancreatic beta-cells through the formation of peptide bonds between proinsulin fragments and other peptides. HIPs, which have been confidently identified in pancreatic islets by mass spectrometry, are targeted by CD4 T cells in subjects with Type 1 Diabetes (T...
ORGANISM(S): Mus musculus (Mouse) 
2023-11-16 | PXD032664 | Pride
Beta cell Proteins Insulin secretory granule Proteases 
UnknownA new model for predicting the occurrence of polycystic ovary syndrome: Based on data of tongue and pulse.
Not available
S-EPMC10281487 | biostudies-literature
MetabolomicsFlavonoid Biosynthesis Is Likely More Susceptible to Elevation and Tree Age Than Other Branch Pathways Involved in Phenylpropanoid Biosynthesis in Ginkgo Leaves
Ginkgo leaves are always resources for flavonoids pharmaceutical industry. However, the effect of the elevation and tree age changes on flavonoid biosynthesis have not been detailly explored in Ginkgo leaves. In addition, whether these environmental pressures have similar effects on the biosynthesis...
2020-12-14 | MTBLS962 | MetaboLights
UnknownDosimetric Effect of Thymus on Radiation-Induced Lymphopenia in Breast Cancer Patients Who Received Adjuvant Radiotherapy.
Not available
S-EPMC12690058 | biostudies-literature
TranscriptomicsTime-series analyses of Monterey Bay coastal microbial picoplankton using a “genome proxy” microarray
To gain improved temporal, spatial and phylogenetic resolution of marine microbial communities, in this study we expanded the original prototype genome proxy array (an oligonucleotide microarray targeting marine microbial genome fragments and genomes), evaluated it against metagenomic sequencing, an...
ORGANISM(S): unidentified 
2010-04-24 | E-GEOD-21502 | biostudies-arrayexpress
UnknownImproved Diagnostics Help to Identify Clinical Features and Biomarkers That Predict Mycoplasma pneumoniae Community-acquired Pneumonia in Children.
Not available
S-EPMC7108170 | biostudies-literature
UnknownPredicting 2-year time to progression in diffuse large B cell lymphoma using 3D CNNs on whole-body PET/CT scans.
Not available
S-EPMC12662970 | biostudies-literature
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