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GenomicsAuthentication and characterisation of a new oesophageal adenocarcinoma cell line: MFD-1
Whole genome sequencing (WGS) from snap-frozen oesophageal tumour tissue and germline nucleic acids isolated from peripheral blood mononuclear cells (PBMC) was performed as part of the International Cancer Genome Consortium project and OCCAMS consortium (1,2). Filtered read sequences were mapped to ...
ORGANISM(S): Homo sapiens 
2016-09-09 | E-MTAB-4600 | biostudies-arrayexpress
TranscriptomicsA new subtype of bone sarcoma defined by BCOR-CCNB3 gene fusion
The identification of subtype-specific translocations has revolutionized diagnostics of sarcoma and provided new insight into oncogenesis. We used RNA-Seq to investigate samples diagnosed as small round cell tumors of bone, possibly Ewing sarcoma, but lacking the canonical EWSR1-ETS translocation. A...
ORGANISM(S): Homo sapiens 
2012-03-03 | E-GEOD-34800 | biostudies-arrayexpress
TranscriptomicsGenome and transcriptome study of the response to irinotecan and bevacizumab in recurrent glioblastomas (CIT - Homo sapiens - BEVA)
A Cartes d'Identite des Tumeurs (CIT) project from the French National League Against Cancer (http://cit.ligue-cancer.net ) 25 glioblastoma multiforme tumors hybridized on Illumina SNP and Affymetrix gene expression arrays. Project leader : François DUCRAY (francois.ducray@chu-lyon.fr). CIT Analys...
ORGANISM(S): Homo sapiens 
2013-01-15 | E-MTAB-951 | biostudies-arrayexpress
UnknownCooperation between somatic mutations and germline susceptibility variants in tumorigenesis - a dangerous liaison.
Not available
S-EPMC4909413 | biostudies-literature
UnknownUse of microsatellite markers and gene dosage to quantify gene copy numbers in Candida albicans.
Not available
S-EPMC1081221 | biostudies-literature
TranscriptomicsHuman610-Quadv1 SNP data for an Integrated genomic analysis of oligodendroglial tumours identifies subgroups of 1p/19q co-deleted oligodendrogliomas
A Cartes d'Identite des Tumeurs (CIT) project from the french Ligue Nationale Contre le Cancer (http://cit.ligue-cancer.net: Oligodendroglial tumours (OT) are a heterogeneous group of gliomas. Three molecular subgroups are currently distinguished based on the IDH mutation and the 1p/19q co-deletion....
ORGANISM(S): Homo sapiens 
2016-03-11 | E-MTAB-3905 | biostudies-arrayexpress
TranscriptomicsHumanCore SNP data for an Integrated genomic analysis of oligodendroglial tumours identifies subgroups of 1p/19q co-deleted oligodendrogliomas
A Cartes d'Identite des Tumeurs (CIT) project from the french Ligue Nationale Contre le Cancer (http://cit.ligue-cancer.net: Oligodendroglial tumours (OT) are a heterogeneous group of gliomas. Three molecular subgroups are currently distinguished based on the IDH mutation and the 1p/19q co-deletion....
ORGANISM(S): Homo sapiens 
2016-03-11 | E-MTAB-3896 | biostudies-arrayexpress
TranscriptomicsTranscription profiling by array of undifferentiated and differentiated human soft tissue sarcomas isolated from adipose tissue
Comparative analysis of undifferentiated and well-differentiated human soft tissue sarcomas
ORGANISM(S): Homo sapiens 
2007-03-31 | E-MEXP-964 | biostudies-arrayexpress
UnknownTransmorph: a unifying computational framework for modular single-cell RNA-seq data integration.
Not available
S-EPMC10336778 | biostudies-literature
UnknownPlasticity in Neuroblastoma Cell Identity Defines a Noradrenergic-to-Mesenchymal Transition (NMT).
Not available
S-EPMC8230375 | biostudies-literature
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