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TranscriptomicsTranscriptome dynamics during fruit development of sweet orange (Citrus sinensis)
• To dissect how the genes are dynamically and differentially expressed during fruit development in sweet orange, a comprehensive transcriptomic study was performed in a pleiotropic mutant (MT) and its wild type (WT). • The detection of the fruit transcriptomic changes was conducted at five stages ...
ORGANISM(S): Citrus sinensis 
2012-06-22 | E-GEOD-22505 | biostudies-arrayexpress
TranscriptomicsA genomic approach to bud mutation in sweet orange (Citrus sinensis L. Osbeck) fruit
Bud mutations arise often in citrus. The selection of mutants is one of the most important breeding methods in citrus. However, the molecular bases of bud mutation have rarely been studied. To identify the potential important or novel genes involved in bud mutation, different transcriptomic techniqu...
ORGANISM(S): Citrus sinensis 
2009-03-09 | E-GEOD-10729 | biostudies-arrayexpress
TranscriptomicsExpression data from citrus embryogenic calli with engineered carotenoid accumulation
Carotenoids have been demonstrated to be indispensable plant secondary metabolites that are involved in photosynthesis, antioxidation, and phytohormone biosynthesis. Carotenoids are likely involved in other biological functions that have yet to be discovered. In this study, we utilized genomic expre...
ORGANISM(S): Citrus reticulata x Citrus paradisi 
2014-09-23 | E-GEOD-61633 | biostudies-arrayexpress
TranscriptomicsDiscovery and comparative profiling of microRNAs in sweet oranges
Small RNAs (sRNAs) are emerging as important regulators of biological processes in plants. To characterize the small RNA species and expression changes in ‘Anliu’ sweet orange (wild type, WT) and its red-flesh mutant (MT) with lycopene accumulation, we used high-throughput pyrosequencing to identify...
ORGANISM(S): Citrus sinensis 
2010-09-22 | E-GEOD-18207 | biostudies-arrayexpress
TranscriptomicsExpression analysis of CsMYBF1 overexpressing tomato fruit
To investigate global genome expression changes caused by the ectopic expression of CsMYBF1, we compared the gene expression profiles of the transgenic and wild type tomato fruits by RNA-seq analysis.Fruit samples from at least five plants of each genotype, which were harvested between 7 and 10 days...
ORGANISM(S): Solanum lycopersicum 
2015-09-22 | E-GEOD-73300 | biostudies-arrayexpress
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