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MetabolomicsIdentification of Conserved and Diverse Metabolic Shifts during Rice Grain Development (LC-MS pos assay)

Seed development dedicates to reserve synthesis and accumulation and uncovering its genetic and biochemical mechanisms has been a major research focus. Although proteomic and transcriptomic analyses revealed dynamic changes of genes and enzymes involved, the information regarding concomitant meta...

2016-05-03 | MTBLS286 | MetaboLights
MetabolomicsIdentification of Conserved and Diverse Metabolic Shifts during Rice Grain Development (LC-MS neg assay)

Seed development dedicates to reserve synthesis and accumulation and uncovering its genetic and biochemical mechanisms has been a major research focus. Although proteomic and transcriptomic analyses revealed dynamic changes of genes and enzymes involved, the information regarding concomitant meta...

2016-05-03 | MTBLS287 | MetaboLights
MetabolomicsIdentification of Conserved and Diverse Metabolic Shifts during Rice Grain Development (GC-MS assay)

Seed development dedicates to reserve synthesis and accumulation and uncovering its genetic and biochemical mechanisms has been a major research focus. Although proteomic and transcriptomic analyses revealed dynamic changes of genes and enzymes involved, the information regarding concomitant meta...

2016-05-03 | MTBLS288 | MetaboLights
MetabolomicsMetabolic responses of rice cultivars with different tolerance to combined heat and drought stress under field conditions
Rice is susceptible to both heat and drought stress, in particular during flowering and grain filling, when both grain yield and quality may be severely compromised. However, under field conditions, these two stresses rarely occur separately. Under well-watered conditions, plants avoid heat stress b...
2019-04-25 | MTBLS801 | MetaboLights
ProteomicsRice developing ovary at 10 days after flowering
Proteome analysis of developing grain in indica rice "Naba" (S1) and "Puluik Arang" (S2). Ovary samples at 10 days after flowering were used.
ORGANISM(S): Oryza Sativa 
2019-10-18 | PXD015105 | JPOST Repository
TranscriptomicsA diverse set of microRNAs and microRNA-like small RNAs in developing rice grains
Endogenous small RNAs, including microRNAs (miRNAs) and short-interfering RNAs (siRNAs), function as posttranscriptional or transcriptional regulators in plants. miRNA function is essential for normal development and therefore likely to be important in the growth of the rice grain. To investigate th...
ORGANISM(S): Oryza sativa 
2008-08-21 | E-GEOD-11014 | biostudies-arrayexpress
ProteomicsGel-free/label-free proteomic analysis of developing rice grains under heat stress
High temperature markedly reduces the yields and quality of rice grains. To identify the mechanisms underlying heat stress-induced responses in rice grains, proteomic technique was used. Khao Dawk Mali 105 rice grains at the milky, doughy, and mature stages of development after flowering were treate...
ORGANISM(S): Oryza sativa (Rice) 
2015-12-17 | PXD003156 | Pride
Heat stress Proteomics Rice Developing rice grain 
GenomicsGenome-wide maps of DNA methylation state in rice embryo and endosperm
We report the application of methylacytosine immunoprecipetation combined with Illumina sequencing (MeDIP-seq) for high-throughput profiling of DNA methylation in rice embryo 3, 6, 9 DAP and endosperm 2, 3, 6, 9 DAP. A total number of 12-14 million of 2×49 bp paired-end reads was generated for each ...
ORGANISM(S): Oryza sativa 
2015-09-01 | E-GEOD-57706 | biostudies-arrayexpress
TranscriptomicsGene expression profile in rice developing caryopsis exposed to high temperature
To summarize the impact of high temperature on rice grain filling, we performed the rice 44k oligo microarray analysis. Total RNA was extracted from developing caryopses ripened under 33ËšC/28ËšC (high temperature) and 25ËšC/20ËšC (Control), and subjected to 44k oligo-DNA microarray with 3 biologica...
ORGANISM(S): Oryza sativa 
2010-05-05 | E-GEOD-20345 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of rice stigma
In angiosperms, stigma provides initial nutrients and guidance cues for pollen grain germination and tube growth. However, little is known about genes that regulate these processes in rice. Here we generate rice stigma-specific gene expression profiles through comparing genome-wide expression patter...
ORGANISM(S): Oryza sativa 
2008-11-08 | E-GEOD-7951 | biostudies-arrayexpress
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