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TranscriptomicsMicroarray analysis of RNA stability in mouse Neuro-2A cells
Microarray analysis of RNA stability in mouse Neuro-2A cells
ORGANISM(S): Mus musculus 
2011-01-24 | E-MTAB-952 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of mouse ventral forebrain cells in neuronal-glial fate specification and oligodendrocyte lineage maturation
This experiment compared the expression of mRNAs and noncoding RNAs during neuronal-glial fate specification and oligodendrocyte lineage maturation. The primary aim of the experiment was to identify ncRNAs that were differentially expressed during this process.
ORGANISM(S): Mus musculus 
2010-01-07 | E-TABM-874 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of mouse naive and memory CD8+ T cells
This experiment compared the expression of mRNAs and noncoding RNAs between naive and memory CD8+ T cells, with the primary aim of identifying noncoding RNAs that were dynamically regulated during T cell differentiation.
ORGANISM(S): Mus musculus 
2008-11-01 | E-TABM-492 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of mouse resting and activated CD8+ T cells
This experiment compared the expression of mRNAs and noncoding RNAs between resting and activated CD8+ effector T cells, with the primary aim of identifying noncoding RNAs that were dynamically regulated during T cell activation.
ORGANISM(S): Mus musculus 
2008-11-01 | E-TABM-491 | biostudies-arrayexpress
TranscriptomicsMicroarray analysis of RNA stability in mouse Neuro-2A cells
Cells were grown to ~50% confluency before RNA polymerase activity was blocked with 10 µg/mL Actinomycin D (Sigma) in DMSO. Control cells were treated with DMSO alone. Transcriptional inhibition of N2A cells was conducted for 32 h with cells harvested at time zero (0 h) and after 30 min, 2, 4, 8, 16...
ORGANISM(S): Mus musculus 
2012-01-24 | E-MTAB-961 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of mouse embryoid body differentation in a time series
Expression profiling of a 16 day mouse embryoid body (EB) differentiation time course.
ORGANISM(S): Mus musculus 
2008-06-01 | E-TABM-433 | biostudies-arrayexpress
ProteomicsRNA N6-Methyladenosine (m6A) regulates cell cycle progression in Diffuse Midline Glioma (DMG) and confers sensitivity to FTO inhibition
Diffuse Midline Gliomas (DMG) are deadly pediatric brain cancers with limited treatment options. These tumors likely arise from oligodendrocyte precursor cells (OPC) that acquire a driver histone mutation, leading to an aberrant epigenome. RNA N6-methyladenosine (m6A) is a vital epi-transcriptomic m...
ORGANISM(S): Homo sapiens (Human) 
2026-03-23 | PXD058793 | Pride
TranscriptomicsNext Generation Sequencing Analysis of Saccharopolyspora erytharea transcriptomes
We report the high-throughput profiling of saccharopolyspora erythraea life cycle in bioreactors. RNA was harvested at seven time-points from bioreactors, three points immediately before, one during and three following the metabolic switch (as evidenced by biomass cell dry weight). We prepared unstr...
ORGANISM(S): Saccharopolyspora erythraea 
2013-06-18 | E-GEOD-39722 | biostudies-arrayexpress
TranscriptomicsTranscriptome analysis of long term potentiation in rat dentate gyrus
In vivo high frequency stimulated of left dentate gyrus was performed on anaesthetised rats followed by RNA-seq to study long-term potentiation. Both left and right dentate gyrus was collected, sequenced and compared against each other for naive rats and for rats 30 min, 2 hours, and 5 hours post-HF...
ORGANISM(S): Rattus norvegicus 
2015-10-20 | E-MTAB-3375 | biostudies-arrayexpress
GenomicsCMML Collection of WES, WGS, RNA-Seq and ERRBS data
We first performed a comprehensive analysis of the genome of 66 chronic myelomonocytic leukemia cases using whole exome (N=49) or whole genome (N=17) sequencing for paired leukemic-control DNA. Then, we realized serial analysis of whole exome sequence in 17 cases, completed with serial RNA sequencin...
EGAS00001001264 | EGA
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