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Unknown
(1439)
Genomics
(143)
Transcriptomics
(90)
Proteomics
(53)
Methylation profiling
(3)
Metabolomics
(3)
Organisms
Aerococcus urinae NBRC 15544 = CCUG 36881
(48)
Allexis
(48)
Canis lupus familiaris
(48)
Carya cathayensis
(48)
Clostridioides difficile 630
(48)
Cyanophora paradoxa
(48)
Ensifer adhaerens
(48)
Enterococcus faecalis
(48)
Homo sapiens
(36)
Mus musculus
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Saccharomyces cerevisiae
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Escherichia coli
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Rattus norvegicus
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Drosophila melanogaster
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Arabidopsis thaliana
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human oral metagenome
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Pseudomonas aeruginosa PAO1
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Danio rerio
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Daphnia magna
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mixed sample
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Bos taurus
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Curvularia lunata
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Absidia caerulea
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human metagenome
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Cavia porcellus
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Pseudomonas aeruginosa
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environmental samples
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Organisms
Homo sapiens
(30)
Mus musculus
(24)
Rattus norvegicus
(3)
Paracoccus sp. DMF-8
(2)
Aminobacter anthyllidis
(2)
Hyphomicrobium sulfonivorans
(2)
Aquamicrobium lusatiense
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Paracoccus aminovorans
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Daphnia magna
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Escherichia coli
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Arabidopsis thaliana
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Saccharomyces cerevisiae
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Hyphomicrobium sp. D-2
(1)
Hyphomicrobium sp. DMF-1
(1)
Paracoccus sp. PXZ
(1)
Aminobacter sp. DMF-10
(1)
Pseudomonas sp. DMF-1
(1)
Rhodococcus sp. DMF-1
(1)
Aquamicrobium sp. DMF-9
(1)
Hyphomicrobium sp. DMF-2
(1)
Paracoccus zhejiangensis
(1)
Paracoccus sp. DMF
(1)
Curvularia lunata
(1)
Pseudoxanthomonas mexicana
(1)
Ramlibacter tataouinensis
(1)
Methylobacterium sp. DM1
(1)
Achromobacter mucicolens
(1)
Absidia caerulea
(1)
Chryseobacterium gambrini
(1)
Aminobacter niigataensis
(1)
Repository
ENA
(133)
biostudies-arrayexpress
(54)
geo
(50)
pride
(48)
iProX
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MetaboLights
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MassIVE
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MetabolomicsWorkbench
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(9)
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(1)
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(1)
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(1)
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(1)
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(1)
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(1)
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(1)
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(2)
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(1)
Alzheimer's disease
(1)
Prostate adenocarcinoma
(1)
Relapsing-remitting multiple sclerosis
(1)
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Mass Spectrometry
(49)
Shotgun proteomics
(18)
Gel-based experiment
(13)
Affinity purification coupled with mass spectrometry proteomics
(6)
Bottom-up proteomics
(5)
Chemical cross-linking coupled with mass spectrometry proteomics
(5)
All-ion fragmentation
(2)
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(1)
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(1)
ESI
(1)
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(1)
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(1)
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(1)
Instrument Platform
Illumina HiSeq 2500
(5)
Illumina NovaSeq 6000
(5)
NextSeq 500
(5)
NextSeq 550
(4)
NextSeq 2000
(3)
DNBSEQ-G400
(2)
Illumina HiSeq 4000
(2)
Sony SH800S
(1)
MinION
(1)
BGISEQ-500
(1)
Illumina HiSeq 3000
(1)
LTQ Orbitrap Velos
(1)
Liquid Chromatography MS - positive - normal-phase
(1)
Liquid Chromatography MS - negative - normal-phase
(1)
MS Imaging -
(1)
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2022
(16)
2024
(14)
2023
(14)
2015
(13)
2025
(12)
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(12)
2020
(11)
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2023
(32)
2024
(21)
2026
(16)
2025
(14)
2014
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(9)
2019
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2021
(6)
2018
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2017
(3)
2020
(2)
2015
(2)
2016
(1)
Classification
bacteria
(4)
fungi
(1)
Study type
Transcription profiling by array
(15)
RNA-seq of coding RNA
(13)
RNA-seq of coding RNA from single cells
(7)
ATAC-seq
(4)
DNA-seq
(4)
ChIP-seq
(3)
RNA-seq of non coding RNA
(2)
Animal - Single-cell sequencing
(1)
Animal - High-throughput sequencing
(1)
Comparative genomic hybridization by array
(1)
Hi-C
(1)
Proteomic profiling by array
(1)
RNA-seq of total RNA
(1)
Release Date
2022
(199)
2025
(169)
2023
(154)
2021
(149)
2020
(133)
2019
(120)
2024
(114)
2018
(90)
2017
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2016
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2015
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2014
(37)
2013
(33)
2026
(27)
2010
(25)
2011
(21)
2009
(20)
2012
(18)
2008
(8)
2007
(5)
2006
(1)
2005
(1)
Lab affiliation
ETHZ IMSB
(3)
Institute of Animal Reproduction and Food Research of Polish Academy of Sciences
(2)
Instituto de Parasitología y Biomedicina "López - Neyra", CSIC Departamento de Biología Celular e Inmunología Parque Tecnológico de Ciencias de la Salud, Avda. del Conocimiento, s/n 18016, Granada-Spain
(2)
1 Department of Computer Science, Hanyang University, Seoul 04763, Republic of Korea 2 Institute for Artificial Intelligence Research, Hanyang University, Seoul 04763, Republic of Korea
(1)
AG Proteomics & Bioanalytics - Institut für Experimentelle Medizin Christian-Albrechts-Universität zu Kiel 24105 Kiel, Germany
(1)
Carlos Chagas Institute - Fiocruz - Brazil
(1)
Cedars-Sinai Medical Center
(1)
Centre of Marine Sciences, CCMAR, Universidade do Algarve, Campus de Gambelas, Edifício 7, 8005-139, Faro, Portugal
(1)
Cornell University
(1)
Department of Analytical Biochemistry Faculty of Science and Engineering University of Groningen
(1)
Department of Analytical Biochemistry and Interfaculty Mass Spectrometry Center, Groningen Research Institute of Pharmacy, University of Groningen, A. Deusinglaan 1, 9713 AV, Groningen, The Netherlands
(1)
Department of Analytical Biochemistry, University of Groningen
(1)
Department of Biological Engineering Department of Chemistry Massachusetts Institute of Technology Cambridge, MA 02139
(1)
Department of Chemistry, City University of Hong Kong, 83 Tat Chee Avenue, Kowloon, Hong Kong, P. R. China Key Laboratory of Biochip Technology, Biotech and Health Centre, City University of Hong Kong, Shenzhen Research Institute, Shenzhen 518057, China
(1)
Department of Molecular Biology and Genetics - Cellular Health, Intervention, and Nutrition, Aarhus University
(1)
Department of Molecular and Cellular Biology (MOCEL), University of Geneva, (Previously) Department of Fundamental Microbiology (DMF), University of Lausanne
(1)
Department of Pharmacology, Physiology & Neuroscience School of Medicine University of South Carolina Columbia, South Carolina, 29209 USA
(1)
EMBL, Heidelberg
(1)
ETH Zurich Dr. Matthias Gstaiger Institute of Molecular Systems Biology HPM F43 Otto-Stern-Weg 3 8093 Zürich Switzerland
(1)
Group Leader
(1)
Institute for Experimental Medicine, Kiel University, Kiel, Germany
(1)
Institute of Animal Reproduction and Food Research, Polish Academy of Sciences
(1)
Institute of Molecular Systems Biology HPM F43 Otto-Stern-Weg 3 8093 Zürich Switzerland
(1)
Instituto de Parasitología y Biomedicina "López - Neyra", CSIC Departamento de Biología Celular e Inmunología Parque Tecnológico de Ciencias de la Salud, Avda. del Conocimiento, s/n 18016, Granada-Spain
(1)
Instituto de Parasitología y Biomedicina "López - Neyra", CSIC Departamento de Biología Celular e Inmunología Parque Tecnológico de Ciencias de la Salud, Avda. del Conocimiento, s/n 18016 Armilla (Granada). Spain
(1)
Instituto de Parasitología y Biomedicina "López - Neyra", CSIC. Departamento de Biología Celular e Inmunología Parque Tecnológico de Ciencias de la Salud, Avda. del Conocimiento, s/n.18016 Armilla (Granada). Spain
(1)
Instituto de Parasitología y Biomedicina "López - Neyra", CSIC. Departamento de Biología Celular e Inmunología Parque Tecnológico de Ciencias de la Salud, Avda. del Conocimiento, s/n. 18016, Granada-Spain
(1)
Instiute for Microbiology
(1)
Laboratory for Structural and Computational Proteomics, Carlos Chagas Institute, Fiocruz, Paraná, Brazil
(1)
Laboratory of Structural Biology and Cell Signaling, Institute of Microbiology, The Czech Academy of Sciences, Prague, 14220, Czech Republic
(1)
Tags
pathogen
(5)
xref:PubMed:41509293
(4)
pathogen:bacterium
(4)
xref:PubMed:33468560
(3)
xref:PubMed:39287981
(2)
xref:PubMed:31844089
(2)
xref:PubMed:29445162
(2)
xref:PubMed:38602485
(2)
xref:PubMed:39684792
(2)
xref:PubMed:31300673
(2)
xref:PubMed:35455458
(1)
xref:PubMed:29046485
(1)
xref:PubMed:24533043
(1)
xref:PubMed:36342134
(1)
xref:PubMed:42604343
(1)
xref:PubMed:37483622
(1)
xref:PubMed:30705153
(1)
xref:PubMed:25939751
(1)
xref:PubMed:28870693
(1)
xref:PubMed:37024667
(1)
xref:PubMed:31414163
(1)
xref:PubMed:29367345
(1)
xref:PubMed:35620281
(1)
xref:PubMed:33876201
(1)
xref:PubMed:22912406
(1)
xref:PubMed:40266880
(1)
xref:PubMed:21261883
(1)
xref:PubMed:32055962
(1)
xref:PubMed:17483266
(1)
xref:PubMed:19244141
(1)
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Pseudomonas sp. DMF-1
Pseudomonas sp. DMF-1 Genome sequencing
PRJNA794267
|
ENA
Cite
Rhodococcus sp. DMF-1
Rhodococcus sp. DMF-1 Genome sequencing
PRJNA794015
|
ENA
Cite
Hyphomicrobium sp. DMF-2
Hyphomicrobium sp. DMF-2 Genome sequencing
PRJNA937878
|
ENA
Cite
Aminobacter sp. DMF-10
Aminobacter sp. DMF-10 Genome sequencing
PRJNA937883
|
ENA
Cite
Paracoccus sp. DMF-8
Paracoccus sp. DMF-8 Genome sequencing
PRJNA937880
|
ENA
Cite
Aquamicrobium sp. DMF-9
Aquamicrobium sp. DMF-9 Genome sequencing
PRJNA937881
|
ENA
Cite
Paracoccus sp. DMF
Paracoccus sp. strain DMF Genome sequencing and assembly
PRJNA528176
|
ENA
Cite
Hyphomicrobium sp. DMF-1
Hyphomicrobium sp. DMF-1 Genome sequencing
PRJNA921908
|
ENA
Cite
Paracoccus sp. DMF-8
Paracoccus sp. DMF-8 Genome sequencing and assembly
PRJNA921921
|
ENA
Cite
Hyphomicrobium sulfonivorans strain:DMF-2
Hyphomicrobium sulfonivorans strain:DMF-2 Genome sequencing
PRJNA937887
|
ENA
Cite
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