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TranscriptomicsWild type V. cholerae strain A1552 growth time course in AKI media
We identified the mutated gene locus in a pigment overproducing Vibrio cholerae mutant of strain A1552. The deduced gene product is suggested to be a oxidoreductase based on partial homology to putative homogentisate 1,2-dioxygenase in Pseudomonas aeruginosa and Mesorhizobium loti and we propose tha...
ORGANISM(S): Vibrio cholerae 
2009-01-20 | E-GEOD-14360 | biostudies-arrayexpress
TranscriptomicsGrowth in minimal media with maltose
Growth to mid exponential phase in M9 minimal media supplemented with 0.5% maltose versus growth in rich LB media Set of arrays organized by shared biological context, such as organism, tumors types, processes, etc. Media: M9 minimal media with 0.5% maltose Computed
ORGANISM(S): Vibrio cholerae 
2006-05-20 | E-GEOD-4876 | biostudies-arrayexpress
TranscriptomicsGrowth in minimal media with lactate
Growth to mid exponential phase in M9 minimal media supplemented with 0.5% lactate versus growth in rich LB media Set of arrays organized by shared biological context, such as organism, tumors types, processes, etc. Media: M9 minimal media with 0.5% lactate Computed
ORGANISM(S): Vibrio cholerae 
2006-05-20 | E-GEOD-4875 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of Vibrio cholerae isolated from clinical samples, grown in minimal media with maltose and rich media in order to validate predicted metabolic pathways
Growth to mid exponential phase in M9 minimal media supplemented with 0.5% maltose versus growth in rich LB media
ORGANISM(S): Vibrio cholerae 
2005-01-01 | E-SMDB-3688 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of Vibrio cholerae, isolated from clinical samples, grown in minimal media with lactate or rich media to validate predicted metabolic pathways
Growth to mid exponential phase in M9 minimal media supplemented with 0.5% lactate versus growth in rich LB media
ORGANISM(S): Vibrio cholerae 
2006-06-06 | E-SMDB-3687 | biostudies-arrayexpress
TranscriptomicsDNA microarray analysis of genes positively regulated by HapR
Vibrio cholerae strains A1552 and ATN140 (A1552-delta-hapR) were diluted 1:100 from over night cultures and grown aerobically (at 250 rpm) in M9 minimal medium supplemented with vitamins (MEM vitamin solution, BRL) and 0.5% lactate. At OD600 ~ 0.3 2 mM (GlcNAc)6 (Seikagaku America, East Falmouth, MA...
ORGANISM(S): Vibrio cholerae 
2010-06-30 | E-GEOD-3576 | biostudies-arrayexpress
TranscriptomicsDNA microarray analysis of genes positively regulated by TfoX
Vibrio cholerae strains A1552tfoX/pBAD and A1552tfoX/pBAD-tfoX were diluted 1:100 from over night cultures and grown in LB liquid medium containing 0.2 % L-arabinose and 100 μg/ml ampicillin. At OD600=0.3, samples were quickly harvested in a microcentrifuge at room temperature and the bacterial pel...
ORGANISM(S): Vibrio cholerae 
2010-06-30 | E-GEOD-3577 | biostudies-arrayexpress
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