Domain-motif interaction

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Organisms

Homo sapiens (27)
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Arabidopsis thaliana (4)
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Schizosaccharomyces pombe (2)
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synthetic construct (1)
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UNIPROT ID/AC

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CHEBI ID

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Metabolite Name

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First Public Date

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Modelling Approach

Ordinary differential equation model (1)

Lab affiliation

Department of Cellular & Molecular Physiology, Yale School of Medicine, New Haven, CT 06520, USA. Systems Biology Institute, Yale University, New Haven, CT 06516, USA (7)
Department of Cellular & Molecular Physiology, Yale School of Medicine, New Haven, CT 06520, USA. Systems Biology Institute, Yale University, New Haven, CT 06516, USA (3)
Proteomics Core Facility and Research Group Proteomics, CEITEC-MU, Masaryk University, Brno, Czech Republic (3)
Department of Molecular Biology and Genetics Cornell University 201 Biotechnology 526 Campus Road Ithaca, NY 14853 (2)
Lanzhou Veterinary Research Institute, Chinese Academy of Agricultural Sciences (2)
Agronomy College, Henan Agricultural University, China (2)
South China Agricultural University (2)
State Key Laboratory of Veterinary Etiological Biology, Key Laboratory of Veterinary Parasitology of Gansu Province, Lanzhou Veterinary Research Institute, Chinese Academy of Agricultural Sciences, Lanzhou, Gansu Province 730046, PR China (2)
Lanzhou Veterinary Research Institute (2)
The University of Edinburgh (2)
Key Lab of Integrated Crop Pest Management of Shandong, College of Plant Health and Medicine, Qingdao Agricultural University, Qingdao, China (2)
Max Planck Institute for Terrestrial Microbiology Karl-von-Frisch Str. 10 35043 Marburg Germany (2)
MSBioLMU Großhaderner Str. 2-4 82152 Planegg-Martinsried (2)
Institute of Marine Sciences, Guangdong Provincial Key Laboratory of Marine Biotechnology and STU-UNIVPM Joint Algal Research Center, College of Sciences, Shantou University, Shantou, Guangdong, China; Southern Marine Science and Engineering Guangdong Laboratory, Guangzhou, Guangdong, 515063, China. (1)
Department of Laboratory Animals, College of Animal Sciences, Jilin University, Changchun 130062, Jilin, P.R. China (1)
Medical Research Council (MRC) Protein Phosphorylation and Ubiquitylation Unit, School of Life Sciences, University of Dundee, Dow Street, Dundee DD1 5EH, United Kingdom. (1)
Translational Medical Center for Stem Cell Therapy and Institute for Regenerative Medicine, Medical Innovation Center and State Key Laboratory of Cardiology, Shanghai East Hospital, Clinical and Translational Research Center of Shanghai First Maternity & Infant Hospital, Frontier Science Center for Stem Cell Research, School of Life Sciences and Technology, Sports and Health Research Center, Tongji University Department of Physical Education, Tongji University, Shanghai 200092, China (1)
The Second Affiliated Hospital of Chengdu Medical College (China National Nuclear Corporation 416 Hospital), (1)
University Heidelberg, Centre for molecular biology, mass spectrometry and proteomics core facility (1)
1 Institut de Génétique et de Biologie Moléculaire et Cellulaire (IGBMC), Functional Genomics and Cancer Department, Illkirch, France 2 Institut National de la Santé et de la Recherche Médicale (INSERM), U 1258, Illkirch, France 3 Centre National de la Recherche Scientifique (CNRS),UMR 7104, Illkirch, France 4 Université de Strasbourg, Illkirch, France (1)
Department of Cellular and Molecular Medicine, KU Leuven, Belgium (1)
Guangdong Institute of Applied Biological Resources, Guangdong Academy of Science (1)
Guangzhou Institute of Pediatrics, Guangzhou Women and Children’s Medical Center, Guangzhou Medical University, Guangzhou, 510623, China (1)
Proteomics Facility, The Netherlands Cancer Institute, Plesmanlaan 121, 1066 CX Amsterdam, The Netherlands Biomolecular Mass Spectrometry and Proteomics, Utrecht Institute for Pharmaceutical Sciences, University of Utrecht, Padualaan 8, 3584 CH Utrecht, The Netherlands (1)
UNC Chapel Hill Nutrition Department (1)
CECAD Research Center, Joseph-Stelzmann Str. 26, 50931, Cologne, Germany (1)
Henan Institute of Medical and Pharmaceutical Sciences, Zhengzhou University, Henan 450052, China (1)
Institute of Paulownia, Henan Agricultural University, Zhengzhou, Henan, 450002, P. R. China (1)
College of Veterinary Medicine, Gansu Agricultural University (1)
Hebei agricultural university (1)

IsPrivate

False (2)

Model Flag

Non Kinetic (1)

Classification

protozoa (1)

Study type

Transcription profiling by array (163)
RNA-seq of coding RNA (27)
ChIP-seq (22)
Methylation profiling by array (12)
Other (6)
ChIP-chip by tiling array (5)
Methylation profiling by high throughput sequencing (5)
RNA-seq of coding RNA from single cells (3)
Unknown experiment type (2)
Comparative genomic hybridization by array (2)
ChIP-chip by array (1)
CLIP-seq (1)
ScATAC-seq (1)
MicroRNA profiling by array (1)
DNA-seq (1)
Proteomic profiling by array (1)

Release Date

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2008 (89)
2007 (63)
2006 (41)
2005 (39)
2003 (27)
2002 (25)
2004 (22)
2026 (18)
1998 (15)
2001 (13)
2000 (12)
1997 (7)
1999 (4)

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Genome-wide analysis of transcription factor E2F1 mutant proteins reveals that N- and C-terminal protein interaction domains do not participate in targeting E2F1 to the human genome.

Previous studies of E2F family members have suggested that protein-protein interactions may be the mechanism by which E2Fs are recruited to specific genomic regions. We have addressed this hypothesis on a genome-wide scale using ChIP-seq analysis of MCF7 cell lines that express tagged wildtype and m...

ORGANISM(S): Homo sapiens

2011-04-04 | E-GEOD-28286 | biostudies-arrayexpress

A Novel Protein Interaction between Nucleotide Binding Domain of Hsp70 and p53 Motif.

Not available

S-EPMC4451777 | biostudies-literature

Identification of a structural motif that confers specific interaction with the WD40 repeat domain of Arabidopsis COP1.

Not available

S-EPMC140188 | biostudies-literature

A dynamic view of domain-motif interactions.

Not available

S-EPMC3257277 | biostudies-literature

Solution structure of GOPC PDZ domain and its interaction with the C-terminal motif of neuroligin.