Dong Rui R - OmicsDI

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Unknown (27)
Proteomics (26)
Metabolomics (5)
Transcriptomics (4)
Genomics (1)

Organisms

Homo sapiens (14)
Mus musculus (9)
Photobacterium profundum SS9 (4)
Ficus carica (4)
Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_50_11 (4)
Esocidae (4)
Leishmania braziliensis MHOM/BR/75/M2904 (4)
Potentilla saundersiana (4)
Spirometra erinaceieuropaei (4)
Betaproteobacteria bacterium RIFCSPLOWO2_02_64_14 (4)
Cyprinidae (4)
Euzebya tangerina (4)
Phasianidae (4)
Galloanserae (4)
Malassezia sympodialis ATCC 42132 (4)
Priestia megaterium (4)
Noccaea caerulescens (4)
Francisella philomiragia FSC154 (4)
Toxoplasma gondii type III (4)
Pseudotsuga menziesii var. menziesii (4)
Hebomoia glaucippe (4)
Emiliania (4)
Haptophyta (4)
Strigomonas culicis (4)
Lactococcus cremoris subsp. cremoris UC509.9 (4)
Ovis aries (1)
Spodoptera frugiperda (1)
Glycine max (1)
Rattus norvegicus (1)
Escherichia coli (1)

Repository

iProX (22)
MetaboLights (5)
biostudies-arrayexpress (4)
pride (4)
EGA (1)

Tissue

Cell culture (3)
Permanent cell line cell (1)
Liver (1)

Disease

Wounds and Injuries (1)

Technology Type

Mass Spectrometry (4)
Mass spectrometry assay (2)
Mass spectrometry (2)
Affinity purification coupled with mass spectrometry proteomics (2)
Shotgun proteomics (2)
NMR spectroscopy (1)

Instrument Platform

Liquid Chromatography MS - alternating - HILIC (1)
Nuclear Magnetic Resonance (NMR) - (1)
Liquid Chromatography MS - alternating - reverse phase (1)
Liquid Chromatography MS - positive - reverse-phase (1)
Liquid Chromatography MS - negative - reverse-phase (1)
Liquid Chromatography MS - positive - reverse phase (1)
Liquid Chromatography MS - negative - reverse phase (1)

Publication Date

2025 (7)
2024 (3)
2021 (3)
2026 (2)
2020 (2)
2019 (2)
2015 (1)
2014 (1)
2013 (1)
2012 (1)
2023 (1)
2017 (1)

CHEBI ID

CHEBI:167251 (1)
CHEBI:183962 (1)
CHEBI:167296 (1)
CHEBI:85864 (1)
CHEBI:183810 (1)
CHEBI:141598 (1)
CHEBI:167312 (1)
CHEBI:167264 (1)
CHEBI:156124 (1)
CHEBI:141596 (1)
CHEBI:167253 (1)
CHEBI:166947 (1)
CHEBI:167257 (1)
CHEBI:166944 (1)
CHEBI:166913 (1)
CHEBI:167241 (1)
CHEBI:132542 (1)
CHEBI:131427 (1)
CHEBI:85759 (1)
CHEBI:85760 (1)
CHEBI:133629 (1)
CHEBI:18160 (1)
CHEBI:46245 (1)
CHEBI:167303 (1)
CHEBI:167299 (1)
CHEBI:167298 (1)
CHEBI:72513 (1)
CHEBI:167265 (1)
CHEBI:131428 (1)
CHEBI:166945 (1)

Metabolite Name

Asparatate (1)
Sphingomyelin d38:1 (SM d38:1) (1)
Sphingomyelin d34:1 (SM d34:1) (1)
Sphingomyelin d42:2 (SM d42:2) (1)
Sphingomyelin d36:1 (SM d36:1) (1)
Sphingomyelin d42:1 (SM d42:1) (1)
Sphingomyelin d42:3 (SM d42:3) (1)
Sphingomyelin d38:2 (SM d38:2) (1)
Sphingomyelin d37:1 (SM d37:1) (1)
PG(18:1_18:2) (1)
PE(18:0_18:1) (1)
PE(20:0_20:4) (1)
LPE(22:6) (1)
PC(16:0_22:4) (1)
PE(18:0_20:3) (1)
LPE(18:0) (1)
LPE(18:2) (1)
LPE(18:1) (1)
LPE(20:4) (1)
PE(18:0_20:4) (1)
Nicotinamide adenine dinucleotide (1)
LPC(20:4) (1)
LPC(18:2) (1)
LPC(18:0) (1)
PI(18:0_20:4) (1)
PI(18:0_20:3) (1)
PI(18:0_18:1) (1)
PI(16:0_20:4) (1)
PG(18:1_18:1) (1)
PG(18:0_18:1) (1)

Study type

RNA-seq of coding RNA (4)

Release Date

2015 (4)
2025 (4)
2021 (4)
2017 (4)
2014 (2)
2024 (2)
2022 (2)
2016 (2)
2013 (1)
2012 (1)
2020 (1)
2019 (1)
2018 (1)
2023 (1)

Lab affiliation

Department of Pathophysiology, Key Laboratory of Cell Differentiation and Apoptosis of Chinese Ministry of Education, Rui-Jin Hospital, and State Key Laboratory of Oncogenes and Related Genes and Chinese Academy of Medical Sciences Research Unit (NO.2019RU043), Shanghai Cancer Institute, Shanghai Jiao Tong University School of Medicine, Shanghai 200025, China. (1)
State Key Laboratory of Agricultural Microbiology, College of Veterinary Medicine,Huazhong Agricultural University (1)
Department of Pathophysiology, Key Laboratory of Cell Differentiation and Apoptosis of Chinese Ministry of Education, Rui-Jin Hospital, Shanghai Jiao Tong University School of Medicine (SJTU-SM), Shanghai 200025, China. (1)
Wuhan University (1)

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Twisted Gastrulation BMP Signaling Modulator 1 Regulates Papillary Thyroid Cancer Cell Motility and Proliferation.

Not available

S-EPMC5604214 | biostudies-literature

NONHSAT076754 aids ultrasonography in predicting lymph node metastasis and promotes migration and invasion of papillary thyroid cancer cells.

Not available

S-EPMC5356800 | biostudies-literature

Sensing Ceramides by CYSLTR2 and P2RY6 to Aggravate Atherosclerosis

Recent evidence shows elevated circulating long-chain ceramide levels predicts atherosclerotic cardiovascular disease (ASCVD) independently of cholesterol. Although targeting ceramides signaling may provide therapeutic benefits beyond the treatment of hypercholesterolemia, the underlying mechanis...

2025-04-15 | MTBLS11925 | MetaboLights

In vitro gastrointestinal digestion study of a novel bio-tofu with special emphasis on the impact of microbial transglutaminase.

Not available

S-EPMC5162802 | biostudies-literature

Resveratrol Hinders Postovulatory Aging by Modulating Oxidative Stress in Porcine Oocytes.

Not available

S-EPMC8588440 | biostudies-literature

Clinical characteristics and molecular heterogeneity in Follicular lymphoma with extranodal involvement.

Not available

S-EPMC12553287 | biostudies-literature

Different Role of PET-CT Evaluation in Newly Diagnosed Follicular Lymphoma Upon Rituximab-Based Chemotherapy and Chemo-Free Immunotherapy.

Not available

S-EPMC11666925 | biostudies-literature

Low chorionic villous succinate accumulation associates with recurrent spontaneous abortion risk

Dysregulated extravillous trophoblast invasion and proliferation are known to increase the risk of recurrent spontaneous abortion (RSA); however, the underlying mechanism remains unclear. Herein, in our retrospective observational case-control study we show that villous samples from RSA patients, co...

2021-10-06 | MTBLS2148 | MetaboLights

Comparative transcriptomic analysis of the super hybrid rice Chaoyouqianhao under salt stress.

Not available

S-EPMC9077912 | biostudies-literature

Dietary supplementation of inulin alleviates metabolism disorders in gestational diabetes mellitus mice via RENT/AKT/IRS/GLUT4 pathway.

Not available

S-EPMC8709963 | biostudies-literature