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ProteomicsNPR1-SnRK1 phosphorylation on Orbitrap Astal in DIA mode, Dong lab
Label free phosphorylation analysis of IP using LC-MS/MS.
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) 
2026-08-30 | PXD064730 | Pride
Phosphorylation Dia Label free 
TranscriptomicsExpression profiling of Col-0 and rps2 treated with Psm:AvrRpt2
Identification of differential gene expression during RPS2-mediated effector-triggered immunity in Arabidopsis Four-week-old leaves of Arabidopsis Col-0 wild type and rps2 mutant plant were infiltrated with Pseudomonas syringae pv. Maculicola carring effector AvrRpt2 at OD 0.01. Samples were collect...
ORGANISM(S): Arabidopsis thaliana 
2016-09-01 | E-GEOD-72742 | biostudies-arrayexpress
TranscriptomicsGated SA effect on transcriptome
We used microarrays to identify genes that respond to salycilic acid (SA) differently during the subjective morning and subjective night. 23-day-old wild type Arabidopsis seedlings. 24 samples total. Three biological replicates were used
ORGANISM(S): Arabidopsis thaliana 
2015-06-22 | E-GEOD-61059 | biostudies-arrayexpress
ModelsZhou2015 - Circadian clock with immune regulator NPR1
Zhou2015 - Circadian clock with immune regulator NPR1 Arabidopsis clock model modified from P2012 (Pokhilko et al., 2013 - BIOMD0000000445) model to include the master immune regulator NPR1 coupling to LHY, TOC1 and PRR7. Triggers: The Global Quantities contain triggers that allow one to change co...
2024-09-02 | BIOMD0000000577 | BioModels
TranscriptomicsDNA-damaging agent and immune inducer synergistically induced defence gene expression in Arabidopsis
We used microarrays to identify differentially expressed genes after DNA-damaging agent bleomycin (BLM) and/or immune inducer 2, 6-dichloroisonicotinic acid (INA) treatment. We focused on those genes that were synergistically induced by co-treatment (BLM+INA). Arabidopsis seedlings were treated with...
ORGANISM(S): Arabidopsis thaliana 
2013-11-14 | E-GEOD-44793 | biostudies-arrayexpress
TranscriptomicsSA, elf18 treatment of WT and tbf1 mutant
Identification of TBF1-dependent and SA, elf18-responsive genes in Arabidopsis 24 samples total, 2 treatments with corresponding mock, wild type samples served as control, 3 biological replicates
ORGANISM(S): Arabidopsis thaliana 
2012-01-17 | E-GEOD-34047 | biostudies-arrayexpress
TranscriptomicsEnhanced Salicylic Acid Biosynthesis Is Involved in Heterosis for Bacterial Defense in Arabidopsis
We provide evidence that heterosis for bacterial defense exists in hybrids crossed between some Arabidopsis accessions. Comparison of transcriptomes between hybrids exhibiting heterosis for disease resistance and their parents after inoculation with Pst DC3000 revealed that several key genes involve...
ORGANISM(S): Arabidopsis thaliana 
2015-06-02 | E-GEOD-62256 | biostudies-arrayexpress
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