Dong Xu X - OmicsDI

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Unknown (3811)
Proteomics (130)
Metabolomics (22)
Transcriptomics (17)
Genomics (10)

Organisms

Homo sapiens (75)
Mus musculus (37)
Synechocystis sp. PCC 6803 (4)
Escherichia coli (3)
Rattus norvegicus (3)
Ovis aries (2)
Gallus gallus (2)
Drosophila melanogaster (2)
Macaca fascicularis fascicularis (2)
381198 (2)
Acinetobacter baylyi ADP1 (2)
Arabidopsis thaliana (2)
Bradyrhizobium diazoefficiens USDA 110 (1)
Brassica oleracea (1)
Capra hircus (1)
Brassica rapa subsp. pekinensis (1)
Bos taurus (1)
Dimocarpus longan (1)
Middle East respiratory syndrome-related coronavirus (1)
Oryctolagus cuniculus (1)
Rattus rattus (1)
Spodoptera frugiperda (1)
Brucella abortus 104M (1)
Carya cathayensis (1)
Crocus sativus (1)
Dugesia japonica (1)
Lactiplantibacillus pentosus (1)
Oryza sativa (1)
Palaemonetes sp. common grass shrimp associated circular virus (1)
Saccharina japonica (1)

Repository

pride (70)
iProX (54)
biostudies-arrayexpress (21)
MetaboLights (20)
EGA (6)
MassIVE (6)
GNPS (2)

Tissue

Cell culture (21)
Epithelial cell (9)
Whole body (5)
Liver (4)
Cell suspension culture (3)
Stem cell (3)
B cell (2)
Blood cell (2)
Bone marrow (2)
Brain (2)
Hepatocyte (2)
Macrophage (2)
Oocyte (2)
Ovary (2)
Adipocyte (1)
Blood (1)
Blood plasma (1)
Blood platelet (1)
Early embryonic cell (1)
Embryo (1)
Extracellular vesicle (1)
HEK-293T cell (1)
Kidney (1)
Lung (1)
Neural progenitor cell (1)
Pancreas (1)
Pericyte cell (1)
Permanent cell line cell (1)
Photosynthetic cell (1)
Plant bud (1)

Disease

Breast cancer (5)
Disease free (5)
Colon cancer (2)
Primary immunodeficiency disease (2)
Pulmonary neuroendocrine tumor (2)
Cervix carcinoma (1)
Herpes zoster (1)
Liver cancer (1)
Polycystic Kidney (1)
Type 1 diabetes mellitus (1)
Wounds and Injuries (1)

Technology Type

Mass Spectrometry (70)
Shotgun proteomics (23)
Bottom-up proteomics (18)
Mass spectrometry (17)
Affinity purification coupled with mass spectrometry proteomics (8)
Gel-based experiment (6)
Data-independent acquisition (4)
Top-down proteomics (4)
Data-dependent acquisition (3)
Mass spectrometry assay (2)
Immunopeptidomics (2)
Mass spectrometry imaging (2)
SRM/MRM (2)
NMR spectroscopy (1)
Affinity proteomics (1)
Chemical cross-linking coupled with mass spectrometry proteomics (1)

Instrument Platform

Liquid Chromatography MS - negative - reverse phase (6)
Liquid Chromatography MS - positive - reverse phase (6)
Orbitrap Fusion Lumos (4)
Liquid Chromatography MS - positive - hilic (4)
Liquid Chromatography MS - negative - hilic (3)
6540 Q-TOF LC/MS (Agilent) (2)
Liquid Chromatography MS - (2)
Liquid Chromatography MS - - reverse phase (2)
Liquid Chromatography MS - alternating - hilic (2)
Illumina HiSeq 2500 (1)
Orbitrap Exploris 480 (1)
Orbitrap Elite mass spectrometer(Thermo) (1)
Q Exactive HF (1)
Q Exactive HF-X (1)
6530 Q-TOF LC/MS (Agilent) (1)
Liquid Chromatography MS - Negative (LC-MS (Negative)) (1)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (1)
Liquid Chromatography MS - alternating - reverse phase (1)
Nuclear Magnetic Resonance (NMR) - (1)

Publication Date

2023 (27)
2025 (25)
2024 (22)
2022 (21)
2021 (15)
2026 (13)
2020 (9)
2013 (7)
2019 (7)
2015 (6)
2014 (5)
2018 (5)
2016 (4)
2012 (2)
2010 (2)
2017 (2)

CHEBI ID

CHEBI:15354 (7)
CHEBI:16704 (7)
CHEBI:16708 (7)
CHEBI:17368 (7)
CHEBI:30769 (7)
CHEBI:32816 (7)
CHEBI:15428 (6)
CHEBI:15603 (6)
CHEBI:16610 (6)
CHEBI:16750 (6)
CHEBI:16870 (6)
CHEBI:17154 (6)
CHEBI:17596 (6)
CHEBI:18186 (6)
CHEBI:18237 (6)
CHEBI:27266 (6)
CHEBI:6650 (6)
CHEBI:10072 (5)
CHEBI:15741 (5)
CHEBI:15891 (5)
CHEBI:16027 (5)
CHEBI:16040 (5)
CHEBI:16235 (5)
CHEBI:16335 (5)
CHEBI:16709 (5)
CHEBI:16856 (5)
CHEBI:16865 (5)
CHEBI:17405 (5)
CHEBI:17533 (5)
CHEBI:17562 (5)

Metabolite Name

4-Pyridoxic acid (4)
N6-Acetyl-L-lysine (4)
Uridine (4)
Adenine (3)
Adenosine (3)
Betaine (3)
Carnitine (3)
Cytidine (3)
Glutamine (3)
Hypoxanthine (3)
Indole-3-carboxylic acid (3)
Inosine (3)
Leucine (3)
Methionine sulfoxide (3)
Methylmalonic acid (3)
N-Acetylputrescine (3)
Nicotinamide (3)
Phenylalanine (3)
Pyruvic acid (3)
Tyrosine (3)
Urea (3)
Valine (3)
Xanthurenic acid (3)
1,3-diphopshateglycerate (2)
1-Linoleoylglycerol (2)
1-Methyl-Histidine (2)
1-Methyladenosine (2)
1-methylnicotinamide (2)
2'-Deoxycytidine (2)
2'-Deoxyinosine (2)

Study type

RNA-seq of coding RNA (9)
Transcription profiling by array (7)
ChIP-seq (3)
Methylation profiling by high throughput sequencing (1)
RNA-seq of non coding RNA (1)

Release Date

2025 (620)
2022 (526)
2023 (525)
2024 (511)
2021 (365)
2020 (265)
2019 (199)
2018 (158)
2017 (147)
2026 (109)
2016 (98)
2015 (95)
2014 (72)
2013 (51)
2012 (34)
2011 (15)
2010 (12)
2009 (9)
2008 (6)
2005 (5)
2007 (4)
2006 (4)
2002 (2)

Lab affiliation

Zhejiang University (3)
Department of Biochemistry UT Southwestern Medical Center (2)
Department of Biochemistry, University of Texas Southwestern Medical Center, Dallas, 75390, TX, USA (2)
Institute of Translational Medicine, Zhejiang University School of Medicine, Zhejiang University (2)
Key Laboratory for Experimental Teratology of the Ministry of Education, Advanced Medical Research Institute, Qilu Hospital, Cheeloo College of Medicine, Shandong University (2)
Sichuan university (2)
State Key Lab of Reproductive Medicine, Nanjing Medical University (2)
State Key Laboratory of Molecular Developmental Biology, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, No.1 West Beichen Rd., Beijing 100101, China (2)
State Key Laboratory of Molecular Developmental Biology, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, No.1 West Beichen Rd., Beijing 100101, China. (2)
The Cancer Hospital of the University of Chinese Academy of Sciences (Zhejiang Cancer Hospital), Institutes of Basic Medicine and Cancer (IBMC), Chinese Academy of Sciences, Hangzhou 310022, China (2)
Yangzhou University (2)
Beijing Institute of Genomics, Chinese Academy of Sciences (1)
Beijing Key Laboratory for Radiobiology, Beijing Institute of Radiation Medicine, Beijing 100850, P.R. China (1)
Beijing Key Laboratory of DNA Damage Response and College of Life Science, Capital Normal University, Beijing 100048, China (1)
Brain Tumor Center, Division of Experimental Hematology and Cancer Biology, Cincinnati Children’s Hospital Medical Center, Cincinnati, OH 45229, USA (1)
Carnegie Mass Spectrometry Facility (1)
Center for Cell Lineage and Development, CAS Key Laboratory of Regenerative Biology, Guangdong Provincial Key Laboratory of Stem Cell and Regenerative Medicine, GIBH-HKU Guangdong-Hong Kong Stem Cell and Regenerative Medicine Research Centre, Guangzhou Institutes of Biomedicine and Health, Chinese Academy of Sciences, Guangzhou, China. (1)
Center for Regeneration and Aging,BGI-haangzhou (1)
Chinese Academy of Fishery Sciences (1)
College of Animal Science and Veterinary Medicine, Shenyang Agricultural University (1)
Department of Biology, Henan University, Kaifeng 475001, The Peoples Republic of China. (1)
Department of Gastrointestinal Surgery, Shandong Provincial Hospital, jingwuweiqi street, 324, Jinan, Shandong 250021, China (1)
Department of Liver Surgery and Transplantation, Liver Cancer Institute, Zhongshan Hospital, Fudan University; Key Laboratory of Carcinogenesis and Cancer Invasion of Ministry of Education, Key Laboratory of Medical Epigenetics and Metabolism, Institutes of Biomedical Sciences, Fudan University, Shanghai 200032, China (1)
Department of Physiology and Pathophysiology, Tianjin Medical University, Tianjin,, China (1)
Dezhou University (1)
Division of Cell Biology, Histology and Embryology (1)
GIBH (1)
Guangzhou Institute of Pediatrics, Guangzhou Women and Children’s Medical Center, Guangzhou Medical University, Guangzhou, 510623, China (1)
Guangzhou National Laboratory, Guangzhou 510005, Guangdong Province, China (1)
Huzhou Cent Hosp, Affiliated Cent Hosp HuZhou University (1)

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Comprehensive analyses of genetic diversities and population structure of the Guizhou Dong group based on 44 Y-markers.

Not available

S-EPMC10538297 | biostudies-literature

Facilitation of MrgprD by TRP-A1 promotes neuropathic pain.

Not available

S-EPMC6988841 | biostudies-literature

Proteomic response of Saccharina japonica to ocean acidification

We used proteomic analysis to reveal molecular response of Saccharina japonica to the projected ocean acidification conditions.

ORGANISM(S): Saccharina japonica

2018-10-15 | PXD011219 | Pride

Ectopic CXCR2 expression cells improve the anti-tumor efficiency of CAR-T cells and remodel the immune microenvironment of pancreatic ductal adenocarcinoma.

Not available

S-EPMC10908625 | biostudies-literature

Antitumor and Antibacterial Derivatives of Oridonin: A Main Composition of Dong-Ling-Cao.

Not available

S-EPMC6272837 | biostudies-literature

Low chorionic villous succinate accumulation associates with recurrent spontaneous abortion risk

Dysregulated extravillous trophoblast invasion and proliferation are known to increase the risk of recurrent spontaneous abortion (RSA); however, the underlying mechanism remains unclear. Herein, in our retrospective observational case-control study we show that villous samples from RSA patients, co...

2021-10-06 | MTBLS2148 | MetaboLights

Increased adiponectin levels are associated with higher radiographic scores in the knee joint, but not in the hand joint.

Not available

S-EPMC7815782 | biostudies-literature

Myeloid PFKFB3-mediated glycolysis promotes kidney fibrosis

Excessive renal fibrosis is a common pathology in progressive chronic kidney diseases. Inflammatory injury and aberrant repair processes contribute to the development of kidney fibrosis. Myeloid cells, particularly monocytes/macrophages, play a crucial role in kidney fibrosis by releasing their proi...

2024-03-12 | MTBLS8278 | MetaboLights

The X-linked deubiquitinase USP9X is an integral component of centrosome.

Not available

S-EPMC5546028 | biostudies-literature

Colossal permittivity behavior and its origin in rutile (Mg_1/3Ta_2/3)_xTi_1-xO₂.

Not available

S-EPMC5577065 | biostudies-literature

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3990 Results

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