Dong Y Y - OmicsDI

Show results for

Unknown (23584)
Proteomics (508)
Transcriptomics (138)
Metabolomics (75)
Genomics (29)
Models (1)

Organisms

Homo sapiens (295)
Mus musculus (150)
Arabidopsis thaliana (13)
Daphnia pulex (9)
Bombyx mori (8)
Oryza sativa (6)
Drosophila melanogaster (4)
Equus caballus (4)
Zea mays (4)
Phytophthora sojae (2)
Ovis aries (2)
Gallus gallus (2)
Lonicera japonica (1)
Larimichthys crocea (1)
Bradyrhizobium diazoefficiens USDA 110 (1)
Miniopterus schreibersii (1)
Brassica oleracea (1)
Manihot esculenta (1)
Lateolabrax japonicus (1)
Brucella melitensis (1)
Capra hircus (1)
Culex quinquefasciatus (1)
uncultured bacterium (1)
Brassica rapa subsp. pekinensis (1)
Taeniopygia guttata (1)
Macaca mulatta (1)
Brassica napus (1)
Oryza sativa Indica Group (1)
Populus trichocarpa (1)
Anopheles gambiae (1)

Organisms

Rattus norvegicus (1)
Mus musculus (1)

Repository

pride (308)
iProX (178)
biostudies-arrayexpress (142)
MetaboLights (72)
EGA (22)
MassIVE (15)
GNPS (3)
jPOST (3)
PAXDB (3)
geo (2)
ENA (2)
BioModels (1)
PanoramaPublic (1)

Tissue

Cell culture (68)
Epithelial cell (24)
Liver (20)
Brain (19)
Whole body (16)
Hepatocyte (12)
Oocyte (10)
Kidney (9)
Blood (8)
Lung (8)
Heart (7)
Leaf (7)
T cell (7)
Blood cell (6)
Blood serum (6)
Bone marrow (6)
Cell suspension culture (6)
Blood plasma (5)
Skin (5)
Embryo (4)
Plant cell (4)
Stem cell (4)
JURKAT cell (3)
Lymph node (3)
Macrophage (3)
Neutrophil (3)
Ovary (3)
Permanent cell line cell (3)
Skeletal muscle (3)
Testis (3)

Disease

Disease free (12)
Breast cancer (6)
Cervix carcinoma (4)
Acute leukemia (3)
Colon cancer (3)
Hepatocellular carcinoma (2)
Liver cancer (2)
Lung cancer (2)
Primary immunodeficiency disease (2)
Pulmonary neuroendocrine tumor (2)
Temporal lobe epilepsy (2)
Wounds and Injuries (2)
Adenocarcinoma (1)
Abdominal aortic aneurysm (1)
Alzheimer's disease (1)
COVID-19 (1)
Cardiovascular system disease (1)
Chronic kidney disease (1)
Diabetic retinopathy (1)
Diffuse gastric cancer (1)
Esophageal carcinoma (1)
Gonorrhea (1)
Herpes zoster (1)
Infertility (1)
Liver disease (1)
Major depressive disorder (1)
Malaria (1)
Male infertility (1)
Polycystic Kidney (1)
Proteus syndrome (1)

Technology Type

Mass Spectrometry (308)
Shotgun proteomics (151)
Mass spectrometry (61)
Bottom-up proteomics (50)
Gel-based experiment (26)
Affinity purification coupled with mass spectrometry proteomics (25)
Data-independent acquisition (21)
Data-dependent acquisition (19)
SWATH MS (14)
NMR spectroscopy (9)
Top-down proteomics (9)
Chemical cross-linking coupled with mass spectrometry proteomics (8)
SRM/MRM (4)
Immunopeptidomics (3)
Mass spectrometry assay (2)
Affinity proteomics (2)
HDMSE (2)
Proteogenomics (2)
HiSeq X Ten, Illumina HiSeq 2500, ILLUMINA (1)
Illumina HiSeq 2000, Illumina MiSeq (1)
Illumina HiSeq 2500 (ILLUMINA), Illumina HiSeq 4000 (ILLUMINA) (1)
DiaPASEF (1)
Mass spectrometry imaging (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (23)
Liquid Chromatography MS - negative - reverse phase (22)
Q Exactive (8)
Liquid Chromatography MS - negative (8)
Liquid Chromatography MS - positive - hilic (8)
Liquid Chromatography MS - negative - hilic (7)
Liquid Chromatography MS - positive (5)
Bruker (4)
Direct infusion MS - positive (4)
Nuclear Magnetic Resonance (NMR) (4)
Liquid Chromatography MS - alternating - reverse phase (3)
Illumina NovaSeq 6000 (2)
Illumina HiSeq 2000 (2)
Agilent 5975C Series GC/MSD (2)
Orbitrap Fusion Lumos (2)
6540 Q-TOF LC/MS (Agilent) (2)
Direct infusion MS - negative (2)
Gas Chromatography MS - Positive (GC-MS (Positive)) (2)
Gas Chromatography MS - positive (2)
Illumina Genome Analyzer IIx (1)
GenePix 4000B [Axon Instruments] (1)
HiSeq X Ten (1)
Illumina HiSeq 2500 (1)
Illumina HiSeq 4000 (1)
Orbitrap Exploris 480 (1)
LTQ (1)
LTQ Orbitrap Elite (1)
Orbitrap Elite mass spectrometer(Thermo) (1)
Orbitrap Fusion (1)
TSQ Altis (1)

Publication Date

2024 (96)
2022 (87)
2023 (76)
2025 (74)
2021 (68)
2026 (55)
2020 (38)
2014 (34)
2017 (28)
2019 (25)
2010 (23)
2018 (23)
2015 (21)
2013 (19)
2012 (18)
2011 (16)
2016 (14)
2009 (4)
2007 (3)
2008 (2)
2004 (2)
2005 (1)

UNIPROT ID/AC

1FEH1_WHEAT (2)
4565.Traes_1AL_3CF82DD08.2 (2)
4565.Traes_1AL_3FDB6FDB4.1 (2)
4565.Traes_1AL_44FB362A9.2 (2)
4565.Traes_1AL_4E621A250.2 (2)
4565.Traes_1AL_51D597B92.1 (2)
4565.Traes_1AL_52E56C8D3.1 (2)
4565.Traes_1AL_53F3380AF.1 (2)
4565.Traes_1AL_5E2C30B46.1 (2)
4565.Traes_1AL_6B64D0E80.1 (2)
4565.Traes_1AL_72202D9DF.1 (2)
4565.Traes_1AL_738358449.1 (2)
4565.Traes_1AL_78CB13657.2 (2)
4565.Traes_1AL_7B509569F.1 (2)
4565.Traes_1AL_7CF571E9F.1 (2)
4565.Traes_1AL_7D6DC73FC.2 (2)
4565.Traes_1AL_9C2D7A0A6.1 (2)
4565.Traes_1AL_9EFC68149.1 (2)
4565.Traes_1AL_A47D32D30.1 (2)
4565.Traes_1AL_A69755144.1 (2)
4565.Traes_1AL_B15921488.1 (2)
4565.Traes_1AL_BAAF4391C.1 (2)
4565.Traes_1AL_BAB3D977B.1 (2)
4565.Traes_1AL_D06A380E9.2 (2)
4565.Traes_1AL_D39C4F23A.2 (2)
4565.Traes_1AL_D789B5634.1 (2)
4565.Traes_1AL_D8B97BD8D.1 (2)
4565.Traes_1AL_D8FE82B94.1 (2)
4565.Traes_1AL_E07235CF1.1 (2)
4565.Traes_1AL_EEB8BBB6B.1 (2)

CHEBI ID

CHEBI:16704 (23)
CHEBI:30769 (23)
CHEBI:15354 (22)
CHEBI:15741 (20)
CHEBI:16919 (20)
CHEBI:17368 (20)
CHEBI:7916 (20)
CHEBI:15428 (19)
CHEBI:17154 (19)
CHEBI:18237 (19)
CHEBI:6650 (19)
CHEBI:17568 (18)
CHEBI:17596 (18)
CHEBI:18012 (18)
CHEBI:22660 (18)
CHEBI:32816 (18)
CHEBI:16708 (17)
CHEBI:18186 (17)
CHEBI:15891 (16)
CHEBI:17562 (16)
CHEBI:17895 (16)
CHEBI:27266 (16)
CHEBI:28300 (16)
CHEBI:16449 (15)
CHEBI:16610 (15)
CHEBI:16737 (15)
CHEBI:16750 (15)
CHEBI:16865 (15)
CHEBI:17822 (15)
CHEBI:18257 (15)

Metabolite Name

Uridine (12)
Hypoxanthine (11)
Citric acid (10)
Cytidine (10)
Pantothenic acid (10)
Valine (10)
Glycine (9)
Inosine (9)
L-Phenylalanine (9)
Malic acid (9)
Phenylalanine (9)
Tyrosine (9)
Uracil (9)
Alanine (8)
Creatinine (8)
Glutamine (8)
Guanosine (8)
Isoleucine (8)
L-Valine (8)
Leucine (8)
Pyruvic acid (8)
Serine (8)
Succinic acid (8)
Xanthine (8)
Adenine (7)
Adenosine (7)
Choline (7)
Creatine (7)
Fumaric acid (7)
Glutaric acid (7)

First Public Date

2022 (1)
2014 (1)

Modelling Approach

Ordinary differential equation model (1)

Lab affiliation

Institutes of Biomedical Sciences and department of Chemistry, Fudan University, Shanghai, China (6)
National Key Laboratory of Medical Molecular Biology & Department of Immunology, Institute of Basic Medical Sciences, Chinese Academy of Medical Sciences, 5 Dong Dan San Tiao, Dongcheng District, Beijing 100005, China. (4)
Tsinghua University, China (4)
Zhejiang University (4)
Shandong University (3)
CAS Key Laboratory of Separation Sciences for Analytical Chemistry, National Chromatographic R&A Center, Dalian Institute of Chemical Physics, Chinese Academy of Sciences (CAS), Dalian 116023, China (2)
Department of Biochemistry UT Southwestern Medical Center (2)
Department of Biochemistry, University of Texas Southwestern Medical Center, Dallas, 75390, TX, USA (2)
Huazhong Agricultural University (2)
Hubei University of Medicine, Taihe Hospital (2)
Institute of Translational Medicine, Zhejiang University School of Medicine, Zhejiang University (2)
Key Laboratory for Experimental Teratology of the Ministry of Education, Advanced Medical Research Institute, Qilu Hospital, Cheeloo College of Medicine, Shandong University (2)
Northeast Normal University (2)
Personalized Genomic Medicine Research Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB) (2)
School of Laboratory Medicine and Biotechnology, Southern Medical University (2)
School of Pharmacy, UW-Madison (2)
Shandong Normal University (2)
Sichuan university (2)
State Key Lab of Reproductive Medicine, Nanjing Medical University (2)
State Key Laboratory of Molecular Developmental Biology, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, No.1 West Beichen Rd., Beijing 100101, China (2)
State Key Laboratory of Molecular Developmental Biology, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, No.1 West Beichen Rd., Beijing 100101, China. (2)
State Key Laboratory of Silkworm Genome Biology, Southwest University, Chongqing 400716, China (2)
University of Illinois Urbana-Champaign (2)
Westlake University (2)
Xiamen University, China (2)
Yangzhou University (2)
1. Nephrology Department of Guilin No. 924 Hospital, Guangxi Key laboratory of Metabolic Diseases Research, Guilin Key laboratory of Kidney Diseases Research, 541002, Guilin, Guangxi, People’s Republic of China. 2. Clinical Medical Research Center, the Second Clinical Medical College of Jinan University (Shenzhen People’s Hospital), 518020, Shenzhen, Guangdong, People’s Republic of China. (1)
1. State Key Laboratory of Genetic Evolution & Animal Models, Key Laboratory of Healthy Aging Research of Yunnan Province, Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming 650201, China 2. University of Chinese Academy of Sciences, Beijing 100101, China 3. KIZ/CUHK Joint Laboratory of Bioresources and Molecular Research in Common Diseases, Kunming 650201, China (1)
1Beijing National Laboratory for Molecular Sciences, College of Chemistry and Molecular Engineering, Peking University, Beijing 100871, China. 2Analytical Instrumentation Center, College of Chemistry and Molecular Engineering, Peking University, Beijing 100871, China. 3Center for Quantitative Biology, PKU-Tsinghua Center for Life Sciences, Academy for Advanced Interdisciplinary Studies, Peking University, Beijing 100871, China (1)
1Department of Pathophysiology, Key Laboratory of Cell Differentiation and Apoptosis of Chinese Ministry of Education, Shanghai Jiao Tong University School of Medicine (SJTU-SM), Shanghai 200025, China. 2Institute of Health Sciences, Shanghai Institutes for Biological Sciences of Chinese Academy of Sciences and SJTU-SM, Shanghai 200025, China. (1)