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Unknownqsubsec: a lightweight template system for defining sun grid engine workflows.
Not available
S-EPMC4824124 | biostudies-literature
Unknownfqtools: an efficient software suite for modern FASTQ file manipulation.
Not available
S-EPMC4908325 | biostudies-literature
TranscriptomicsGene expression in human basal, luminal, and stromal cell populations from benign prostatic hyperplasia tissues and comparisons with cultured basal cells.
The understanding of common prostatic disorders has been restricted by both cellular heterogeneity and the scarcity of established cell lines, although organoid technology, based on primary cultures, promises much for the future. In particular, little is known about the aetiology of benign prostatic...
ORGANISM(S): Homo sapiens 
2017-05-09 | E-MTAB-5647 | biostudies-arrayexpress
TranscriptomicsDifferential gene expression analysis comparing vehicle (DMSO) versus KHS101 in glioblastoma cells
To elucidate the anti tumour activity of the small molecule KHS101, in particular in patient-derived glioma stem-like cells.
ORGANISM(S): Homo sapiens 
2017-09-01 | E-MTAB-5713 | biostudies-arrayexpress
TranscriptomicsGene expression differences between matched male and female breast cancer
In this experiment, formalin-fixed paraffin-embedded male (n=15) and female (n=10) primary invasive ductal carcinoma (all ERα-positive, HER2-negative, node-negative) samples were selected and hybridized using the Almac Diagnostics Breast Cancer DSA(TM) array ADXBRCv2a520413 in order to investigate ...
ORGANISM(S): Homo sapiens 
2017-07-04 | E-MTAB-4040 | biostudies-arrayexpress
TranscriptomicsMicroarray analysis of human NK cells following oncolytic reovirus treatment of peripheral blood mononuclear cells (PBMC)
Oncolytic viruses (OV) kill tumour cells directly and induce anti-tumour immunity. We analysed gene expression profiles in human NK cells following treatment of PBMC with oncolytic reovirus in vitro.
ORGANISM(S): Homo sapiens 
2022-01-03 | E-MTAB-9826 | biostudies-arrayexpress
TranscriptomicsThe effects of antimigratory drugs lithium chloride and 6-bromoindirubin-3'-oxime (BIO) in glioblastoma cells
The purpose of the experiment was to better understand the effects of antimigratory drugs lithium chloride and 6-bromoindirubin-3'-oxime (BIO) in glioblastoma cells. U251 cells were grown to 60-70% confluency in DMEM containing 10% FBS in 6 well plates. Drugs were added (LiCl 20 mM, BIO 5 micromol...
ORGANISM(S): Homo sapiens 
2023-03-20 | E-MTAB-12775 | biostudies-arrayexpress
TranscriptomicsGlobal gene expression changes following ELF3 knockdown in prostate epithelial cell lines
This study aimed to elucidate the role of ELF3, an epithelia-specific member of the ETS family, in normal prostate development and prostate cancer. Four comparisons (untreated, mock-transfected, scrambled siRNA, and targeted siRNA) were performed in two prostate epithelial cell lines BPH-1 (benign) ...
ORGANISM(S): Homo sapiens 
2022-04-25 | E-MTAB-11485 | biostudies-arrayexpress
TranscriptomicsGene expression in colorectal liver metastasis tissues from EPA-treated patients
Eicosapentaenoic acid in its free fatty acid form (EPA-FFA), 2g daily, is safe and well-tolerated in patients undergoing liver resection surgery for colorectal liver metastasis.Oral EPA incorporates into colorectal liver metastasis tissue. EPA-FFA treatment is associated with reduced vascularity of ...
ORGANISM(S): Homo sapiens 
2016-03-16 | E-GEOD-79266 | biostudies-arrayexpress
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