Dubois E E - OmicsDI

Show results for

Unknown (1029)
Transcriptomics (42)
Proteomics (31)
Genomics (11)
Metabolomics (11)

Organisms

Schizophyllum commune H4-8 (26)
Mycobacterium tuberculosis SP7 (26)
Oryza sativa Japonica Group (26)
Crotalus durissus terrificus (26)
Eriocheir sinensis (26)
Candidatus Endoriftia persephonae (26)
Mycobacterium tuberculosis SP10 (26)
Mycobacterium tuberculosis SP13 (26)
Cotesia typhae (26)
Mycobacterium tuberculosis SP22 (26)
Cepaea nemoralis (26)
Enterobacter ludwigii (26)
Corynebacterium diphtheriae bv. mitis str. ISS 3319 (26)
Olea europaea (26)
Chlamydomonas reinhardtii (26)
Lama (26)
Planorbella pilsbryi (26)
Wolbachia sp. wMelPop (26)
Pyricularia oryzae P131 (26)
Homo sapiens (21)
Mus musculus (17)
Arabidopsis thaliana (6)
Rattus norvegicus (3)
Bacillus thuringiensis Bt407 (1)
Bacillus thuringiensis (1)
Macaca mulatta (1)
Apis mellifera (1)
Triticum aestivum (1)
Saccharomyces cerevisiae (1)
Drosophila melanogaster (1)

Repository

biostudies-arrayexpress (44)
pride (26)
MetaboLights (10)
EGA (9)
MassIVE (2)
PAXDB (2)
GNPS (1)
jPOST (1)

Tissue

Cell culture (4)
Epithelial cell (4)
B cell (3)
Hepatic stellate cell (2)
Bronchial epithelial cell (2)
Root (2)
Brain (2)
Leaf (2)
Liver (2)
Endothelial cell (1)
Bronchus smooth muscle (1)
Primary cell (1)
HeLa cell (1)
Fibroblast (1)
Cell suspension culture (1)
Plant cell (1)
Colon (1)
Embryonic stem cell (1)
Whole body (1)

Disease

Lymphoma (2)
Chronic lymphocytic leukemia (1)
Liver disease (1)
Alzheimer's disease (1)
Breast cancer (1)
Colon cancer (1)
Human immunodeficiency virus infectious disease (1)

Technology Type

Mass Spectrometry (26)
Shotgun proteomics (15)
Mass spectrometry (7)
Bottom-up proteomics (6)
Affinity purification coupled with mass spectrometry proteomics (6)
Data-dependent acquisition (4)
Mass spectrometry assay (3)
Illumina (various), Illumina (Various) (1)
Proteogenomics (1)
Gel-based experiment (1)
Top-down proteomics (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (4)
Liquid Chromatography MS - alternating - reverse phase (3)
SolariX (2)
Liquid Chromatography MS - negative - reverse phase (2)
BGIseq500 (1)
Hybridized arrays (1)
Total RNA from honey bee brains (1)
Labeled RNA (1)
Honey bee (Apis mellifera) colony. (1)
Brains of infected and control honey bees (1)
White-eye pupae, purified DWV particles (1)
White eye pupae without manipulation. (1)
BGISEQ-500 (1)
Illumina HiSeq 2500 (1)
Illumina NovaSeq 6000 (1)
Illumina HiSeq 2000 (1)
Illumina HiSeq 4000 (1)
NextSeq 500 (1)
Q Exactive HF-X (1)
Direct infusion MS - positive - - Ditect Injection MS (1)
Gas Chromatography MS (1)
Liquid Chromatography MS (Negative) (1)
Liquid Chromatography MS (Positive) (1)
MS Imaging - positive - - Cryogenic OrbiSIMS TOF Image (1)
MS Imaging - negative - - Cryogenic OrbiSIMS Image (1)
MS Imaging - positive - - Cryogenic OrbiSIMS (1)
MS Imaging - negative - - Cryogenic OrbiSIMS (Negative) (1)
MS Imaging - positive - - Cryogenic OrbiSIMS (Positive) (1)
MS Imaging - positive - - Cryogenic ToF-SIMS (1)
Xevo QTof MS (Waters) (1)

Publication Date

2015 (9)
2022 (9)
2017 (8)
2023 (8)
2021 (6)
2014 (6)
2016 (5)
2025 (5)
2024 (4)
2013 (4)
2010 (4)
2026 (4)
2020 (3)
2012 (3)
2006 (3)
2011 (1)
2009 (1)
2007 (1)
2019 (1)
2018 (1)

UNIPROT ID/AC

A0A3B6TKL3_WHEAT (2)
A0A3B6KMD4_WHEAT (2)
A0A3B6KBY5_WHEAT (2)
A0A3B6SCE8_WHEAT (2)
A0A3B6NIJ6_WHEAT (2)
A0A3B6TL76_WHEAT (2)
A0A3B5Z2N0_WHEAT (2)
A0A2X0TY93_WHEAT (2)
A0A077S025_WHEAT (2)
A0A3B6C1S1_WHEAT (2)
A0A3B6TFL6_WHEAT (2)
A0A3B6MSU8_WHEAT (2)
4565.Traes_6AS_5027732B8.1 (2)
4565.Traes_2DL_CDE00B235.1 (2)
4565.Traes_3DL_A62754CCA.2 (2)
A0A3B5ZYX7_WHEAT (2)
4565.Traes_3AL_5027B584C.1 (2)
A0A3B6JFJ4_WHEAT (2)
4565.Traes_7DS_BDB4C8447.2 (2)
A0A3B6QK15_WHEAT (2)
A0A3B5ZRV7_WHEAT (2)
4565.Traes_6AS_9C46FA129.1 (2)
4565.Traes_5BL_A939C0E65.1 (2)
4565.Traes_4BL_3EFFEDE44.1 (2)
A0A3B6CEE9_WHEAT (2)
A0A3B6IQ66_WHEAT (2)
A0A3B6LYY0_WHEAT (2)
A0A3B6S8P4_WHEAT (2)
4565.Traes_2BS_6249E432F.4 (2)
4565.Traes_7AS_0B2600841.1 (2)

CHEBI ID

CHEBI:16704 (4)
CHEBI:17562 (4)
CHEBI:72426 (3)
CHEBI:85853 (3)
CHEBI:65302 (3)
CHEBI:66857 (3)
CHEBI:64516 (3)
CHEBI:64517 (3)
CHEBI:66849 (3)
CHEBI:66850 (3)
CHEBI:16750 (3)
CHEBI:16020 (3)
CHEBI:45996 (3)
CHEBI:137590 (2)
CHEBI:134264 (2)
CHEBI:167008 (2)
CHEBI:140990 (2)
CHEBI:74470 (2)
CHEBI:140902 (2)
CHEBI:138351 (2)
CHEBI:136072 (2)
CHEBI:66864 (2)
CHEBI:178092 (2)
CHEBI:178091 (2)
CHEBI:19068 (2)
CHEBI:178090 (2)
CHEBI:134587 (2)
CHEBI:134487 (2)
CHEBI:71711 (2)
CHEBI:68467 (2)

Metabolite Name

Cytidine (4)
Uridine (4)
Inosine (3)
N-AcetylProline (2)
Indole-3-carboxyaldehyde (2)
2-methylguanosine (2)
1-methylinosine (2)
2-methyladenosine (2)
8-methyladenosine (2)
6-methyladenosine (2)
3-methylpseudouridine (2)
1-methylpseudouridine (2)
4-methylcytidine (2)
Hexose (2)
3-methyluridine (2)
7-methylguanosine (2)
2'-O-methylinosine (2)
5-methylcytidine (2)
5-methyluridine (2)
N1-Methyl-2-pyridone-5-carboxamide (2)
2'-O-methyluridine (2)
Acetylcarnitine (2)
5-Methylcytidine (2)
Indole-3-propionic acid (2)
Deoxyuridine (2)
N8-Acetylspermidine (2)
1-methyladenosine (2)
Indole-3-acetic acid (2)
Glucosamine (2)
2'-O-methylguanosine (2)

Study type

Transcription profiling by array (29)
RNA-seq of coding RNA (8)
Other (2)
ChIP-seq (2)
RNA-seq of coding RNA from single cells (2)
Unknown experiment type (1)

Release Date

2022 (114)
2021 (98)
2025 (96)
2020 (85)
2024 (81)
2023 (76)
2019 (70)
2017 (68)
2018 (68)
2016 (64)
2015 (55)
2014 (39)
2013 (29)
2012 (28)
2011 (28)
2010 (16)
2009 (15)
2026 (12)
2008 (12)
2007 (5)
2006 (5)
2003 (3)
2004 (2)
2002 (1)
2001 (1)
2000 (1)
1997 (1)

Lab affiliation

Univ. Bordeaux, INSERM, CRCTB, U 1045, F-33000 Bordeaux, France (3)
Division of Molecular Genetics, German Cancer Research Center (DKFZ), Heidelberg, Germany (2)
Institute for Integrative Biology of the Cell UMR 9198 CNRS, CEA, Université Paris-Saclay 1 Avenue de la Terrasse, 91190 Gif-sur-Yvette, France (1)
Maastricht University (1)
Institut de biologie moléculaire des plantes, CNRS, Université de Strasbourg, Strasbourg, France (1)
Institute for Integrative Biology of the Cell Department of Virology - Team: Autophagy and Antiviral Immunity UMR 9198 CNRS, CEA, Université Paris-Saclay 1 Avenue de la Terrasse, 91190 Gif-sur-Yvette France (1)
Institute of Molecular Biology (IMB), Mainz 55128, Germany (1)
Global Health Institute EPFL Switzerland (1)
Florey Institute (1)
Department of Biotechnology and Life Sciences University of Insubria via H. Dunant, 3 21100 Varese Italy (1)
Department of Immunology, Genetics & Pathology, Science for Life Laboratory, Uppsala University, Uppsala, Sweden. (1)
Laboratoire de Spectrométrie de Masse Bio-Organique Département des Sciences Analytiques, Institut Pluridisciplinaire Hubert Curien, UMR 7178 (CNRS-UdS) ECPM, Bat. R5-N0, 25 rue Becquerel F67087-Strasbourg-Cedex 2 (1)
CSO, Bioaster, France (1)
Marseille Proteomics, Inserm UMR1068, CNRS UMR7258, Aix Marseille Université U105, Institut Paoli Calmettes (1)
Laboratory of Tropical Crop Improvement, Division of Crop Biotechnics, KU Leuven, B-3001, Leuven, Belgium FAcility for System Biology based Mass Spectrometry (SYBIOMA), KU Leuven, B-3001, Leuven, Belgium (1)
(1) Laboratory of Angiogenesis and Vascular Metabolism, Vesalius Research Center, Department of Oncology, University of Leuven, Leuven, B-3000, Belgium; (2) Laboratory of Angiogenesis and Vascular Metabolism, Vesalius Research Center, VIB, Leuven, B-3000, Belgium (1)
Institute for Diabetes and Obesity, Helmholtz Zentrum München, 85764 Neuherberg, Germany German Center for Diabetes Research, Neuherberg, Germany (1)
Miniaturization for Synthesis, Analysis & Proteomics, UAR 3290, CNRS, University of Lille, 59655 Villeneuve d’Ascq Cedex, France (1)
UMR5240 - Microbiologie, Adaptation et Pathogénie. CNRS / UCBL / INSA / Campus de la Doua - 10 Rue Dubois 69622 Villeurbanne, FRANCE (1)
Department of Anatomy and Cell Biology, Université de Sherbrooke (1)
National Institute of Arthritis and Musculoskeletal and Skin Diseases, National Institutes of Health, Bethesda, MD, USA (1)
Dept Biotecnology and life science, University of Insubria, Varese, Italy (1)
Department of Peptide-based Immunotherapy, University and University Hospital Tübingen, Tübingen, Germany (1)