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TranscriptomicsOligo array for calling CNV's for AUTS2 project [NimbleGen]
Phenotypic and genotypic description of AUTS2 deletion patients found by Array analysis in an international cohort of intellectual disability (ID) and multiple congenital malformations (MCA). Arrays were hybridized and analysed using manufacturer's protocols on DNA from patients with ID/MCA
ORGANISM(S): Homo sapiens 
2012-07-11 | E-GEOD-37654 | biostudies-arrayexpress
TranscriptomicsAUTS2 project
This SuperSeries is composed of the following subset Series: GSE36950: SNP array for CNV calling AUTS2 project [Affymetrix] GSE37141: Oligo array for CNV calling AUTS2 project [Agilent] GSE37142: SNP array for CNV calling AUTS2 project [Illumina] GSE37654: Oligo array for calling CNV's for AUTS2 pro...
ORGANISM(S): Homo sapiens 
2012-07-11 | E-GEOD-37657 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of wheat B102,1-1 line endosperm at 14 dpa and leaf at 8 dpg of the transgenic line
The high molecular weight (HMW) subunits of wheat glutenin are synthesised only in the starchy endosperm tissue of the developing wheat grain. To place the differences observed between the endosperms of the transgenic and non-transgenic lines in a wider developmental context, the transcriptomes of e...
ORGANISM(S): Triticum aestivum 
2005-10-05 | E-MEXP-312 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of wheat B1118-8 4(6) line with its background control-Cadenza bread wheat line. Transcriptomes analysis was performed in endosperm tissue (14 and 28 days post anthesis-dpa) and in leaf tissue (8 days post germination dpg)
B1118-8-4 expresses five HMW subunits encoded by Glu-B1 (14, 15) and Glu D1 (5, 10) and transgene Glu-A1 (Ax1).Cadenza does not express Glu-A1 (Ax1. B111-8-8-4 (6)transgenic wheat line was produced by co-transformation with two plasmids: one of the plasmids carring the transgene HMW-GS 1Ax1 (Halford...
ORGANISM(S): Triticum aestivum 
2005-10-05 | E-MEXP-311 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of wheat L88-18 line vs CTRL_L8831endosperm tissue (14 and 28 days post anthesis-dpa) and in leaf tissue (8 days post germination dpg)
The high molecular weight (HMW) subunits of wheat glutenin are synthesised only in the starchy endosperm tissue of the developing wheat grain. The transcriptomes of the lines L88-18 and L88-31 (Lawrence, G.J., Macritchie, F. & Wrigley, C.W. Dough and baking quality of wheat lines in glutenin subunit...
ORGANISM(S): Triticum aestivum 
2005-10-05 | E-MEXP-310 | biostudies-arrayexpress
TranscriptomicsNimblegen 385K array CGH on NCI-60 cancer cell lines
The NCI-60 cancer cell lines have been used for studying cancer pathogenesis and for drug discovery. This dataset adds to the growing number of datasets on various genomic platforms that have been made public on Cellminer (http://discover.nci.nih.gov/cellminer/) 61 cell lines (including PR:DU145 and...
ORGANISM(S): Homo sapiens 
2011-10-23 | E-GEOD-30291 | biostudies-arrayexpress
TranscriptomicsRAW264.7 cells were treated with KDO, IFN beta and 8Br
RAW 264.7 cells were stimulated with KDO (100 ng/ml), IFN-β (300 pM) and/or 8-Br 100 μM. These ligands were applied individually or in combination with KDO for 60 min and 120 min. Total RNA was extracted using TriPure (Roche) following its protocol. Keywords: designed RAW 264.7 cells were stimulat...
ORGANISM(S): Mus musculus 
2008-06-28 | E-GEOD-11449 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of wheat GF- Transgenic _B1355-4-2 vs CTRL_Cadenza wheat lines endosperm tissue (14 and 28 days post anthesis-dpa) and in leaf tissue (8 days post germination ?dpg)
B1355-4-2 expresses five HMW subunits encoded by Glu-B1 (14, 15) and Glu D1 (5, 10) and transgene Glu-A1 (Ax1).Cadenza does not express Glu-A1 (Ax1. Line B1355-4-2(18) was generated by co-transformation with the ?clean? fragments of the HMW-GS 1Ax1 transgene (Halford, N.G. et al. Analysis of HMW glu...
ORGANISM(S): Triticum aestivum 
2005-10-05 | E-MEXP-307 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of wheat GF-transgenic-B102,1-1 vs control-L88-31 lines endosperm tissue (14 and 28 days post anthesis-dpa) and in leaf tissue (8 days post germination ?dpg)
The high molecular weight (HMW) subunits of wheat glutenin are synthesised only in the starchy endosperm tissue of the developing wheat grain. We studied the effect of introducing transgenes on the global gene expression profiles of selected transgenic wheat lines, particularly during wheat seed dev...
ORGANISM(S): Triticum aestivum 
2005-10-05 | E-MEXP-306 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of wheat GF- TRANS_B102,1-1 vs Conv.bred_L88-18 transgenic lines endosperm tissue (14 and 28 days post anthesis-dpa) and in leaf tissue (8 days post germination ?dpg)
The high molecular weight (HMW) subunits of wheat glutenin are synthesised only in the starchy endosperm tissue of the developing wheat grain. We compared the expressed genomes of the transgenic wheat line B102,1-1 (Rooke et al. Transgene inheritance, segregation and expression in bread wheat. Euphy...
ORGANISM(S): Triticum aestivum 
2005-10-05 | E-MEXP-309 | biostudies-arrayexpress
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