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GenomicsCell type-specific chromatin profiling of Drosophila neurons [ChIP-Seq]
Chromatin profiling of nuclei isolated from genetically defined neuronal subpopulations of the adult Drosophila brain. Cell type-specific histone modification maps were generated from nuclei isolated from all neurons (R57C10-GAL4), Kenyon cells (OK107-GAL4), and octopaminergic (Tdc2-GAL4) neurons us...
ORGANISM(S): Drosophila melanogaster 
2012-08-02 | E-GEOD-37032 | biostudies-arrayexpress
TranscriptomicsCell type-specific gene expression profiling of Drosophila neurons [RNA-Seq]
Gene expression profiling of nuclei isolated from genetically defined neuronal subpopulations of the adult Drosophila brain. Gene expression profiles were generated from nuclei isolated from all neurons (R57C10-GAL4), Kenyon cells (OK107-GAL4), and octopaminergic (Tdc2-GAL4) neurons in the adult Dro...
ORGANISM(S): Drosophila melanogaster 
2012-08-02 | E-GEOD-37027 | biostudies-arrayexpress
TranscriptomicsGlomerular transcriptome from subjects in the NEPTUNE cohort
Glomerular Transcriptome from subjects in the NEPTUNE cohort. A number of samples profiled in this analysis were also profiled in Series GSE68127, and Series GSE108113. RNA from the glomerular compartment of was extracted and processed for hybridization on Affymetrix microarrays. Contributor: NEPTU...
ORGANISM(S): Homo sapiens 
2018-05-17 | E-GEOD-104066 | biostudies-arrayexpress
TranscriptomicsGlomerular Transcriptome from European Renal cDNA Bank subjects and living donors
Glomerular Transcriptome from European Renal cDNA Bank subjects and living donors. Samples included in this analysis have been previously analyzed using older CDF definitions and are included under previous GEO submissions - GSE47183 (chronic kidney disease samples), and GSE32591 (IgA nephropathy sa...
ORGANISM(S): Homo sapiens 
2018-01-24 | E-GEOD-104948 | biostudies-arrayexpress
TranscriptomicsTubulointerstitial transcriptome from ERCB subjects with chronic kidney disease and living donor biopsies.
Tubulointerstitial transcriptome from ERCB subjects with chronic kidney disease and living donor biopsies. Samples included in this analysis have been previously analyzed using older CDF definitions and are included under previous GEO submissions - GSE47184 (chronic kidney disease samples), and GSE3...
ORGANISM(S): Homo sapiens 
2018-01-24 | E-GEOD-104954 | biostudies-arrayexpress
TranscriptomicsShared molecular targets in the glomerular transcriptome from patients with nephrotic syndrome and ANCA-associated vasculitis
Glomerular transcriptome from human kidney biopsies in Neptune and ERCB. A subset of samples profiled in this analysis were also profiled in Series GSE68127, and in GSE104066. Corresponding tubulointerstitial transcriptome data is submitted under GEO ID: GSE108113. RNA from the glomerular compartmen...
ORGANISM(S): Homo sapiens 
2018-05-17 | E-GEOD-108109 | biostudies-arrayexpress
GenomicsEpigenomic Signatures of Neuronal Diversity in the Mammalian Brain
We developed an affinity purification approach to isolate tagged nuclei in mice (similar to INTACT; [Deal R.B. and Henikoff S. A simple method for gene expression and chromatin profiling of individual cell types within a tissue. Dev. Cell 18,1030-1040. (2010)]) and used it to characterize genome-wid...
ORGANISM(S): Mus musculus 
2015-06-17 | E-GEOD-63137 | biostudies-arrayexpress
TranscriptomicsC. elegans SAGE
The SAGE libraries were built from total mRNA populations in specific tissues, cells, mutation-specific populations, and all developmental stages of C. elegans. Tissue- and cell-specific libraries were generated from FACS-sorted cells marked by expression of specific promoter::GFP fusions Keywords ...
ORGANISM(S): Caenorhabditis elegans 
2004-06-11 | E-GEOD-1447 | biostudies-arrayexpress
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