Electroporation

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Leucoraja erinaceus (1)
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Organisms

Mus musculus (134)
Homo sapiens (124)
Mesocricetus auratus (12)
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Gallus gallus (8)
Macaca mulatta (3)
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Candidozyma auris (1)
Drosophila melanogaster (1)
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Stenotrophomonas maltophilia (1)
Pseudomonas aeruginosa (1)
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Repository

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biostudies-arrayexpress (165)
geo (139)
pride (33)
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NODE (1)

Tissue

Cell culture (10)
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Blood cell (1)
Cell suspension culture (1)
Early embryonic cell (1)
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Kidney proximal straight tubule epithelial cell (1)
Melanocyte (1)
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Permanent cell line cell (1)
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Primary cell (1)
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Whole body (1)

Disease

Colorectal Neoplasms (6)
Neoplasm Metastasis (4)
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Colorectal cancer (1)
Rectal Neoplasms (1)
Alzheimer's disease (1)
Basal cell carcinoma (1)
Colorectal adenocarcinoma (1)
Disease free (1)
Leishmaniasis (1)
Renal cell carcinoma (1)
Skin melanoma (1)

Technology Type

Mass Spectrometry (33)
Shotgun proteomics (15)
Bottom-up proteomics (8)
Affinity purification coupled with mass spectrometry proteomics (7)
Mass spectrometry (5)
Data-dependent acquisition (4)
Data-independent acquisition (2)
Gel-based experiment (2)
Immunopeptidomics (1)
SRM/MRM (1)
Top-down proteomics (1)

Instrument Platform

NextSeq 550 (7)
Illumina NovaSeq 6000 (7)
Illumina HiSeq 2500 (6)
NextSeq 500 (5)
Liquid Chromatography MS - positive - reverse phase (4)
Illumina HiSeq 2000 (3)
Illumina MiSeq (2)
Illumina HiSeq 1500 (2)
Liquid Chromatography MS - negative - reverse phase (2)
Linux Bash Scripting (1)
NEBNext Ultra II Directional RNA Library Prep (1)
Qiagen RNeasy Mini Kit (1)
With L-glutamine supplemented with 10% fetal bovine serum (FBS) (Gibco) and 1% penicillin-streptomycin (10,000 units/mL penicillin and 10 mg/mL streptomycin) (Gibco). (1)
CytoFLEX SRT Benchtop Cell Sorter (1)
Sony SH800S Cell Sorter (1)
Agilent Surescan High Resolution DNA Microarray Scanner (1)
Illumina Genome Analyzer II (1)
Scanning hardware (1)
R (1)
HiSeq X Ten (1)
Illumina HiSeq 3000 (1)
Illumina HiSeq 4000 (1)
Q Exactive Orbitrap HF mass spectrometer (1)
Direct infusion MS - positive (1)
Liquid Chromatography MS - negative (1)
Liquid Chromatography MS - positive (1)

Publication Date

2026 (40)
2025 (34)
2021 (30)
2024 (21)
2022 (21)
2010 (20)
2023 (19)
2014 (19)
2015 (18)
2013 (17)
2011 (15)
2012 (14)
2019 (11)
2020 (10)
2018 (10)
2016 (10)
2009 (10)
2017 (8)
2008 (8)
2007 (5)
2006 (3)
2005 (3)

CHEBI ID

CHEBI:16335 (2)
CHEBI:16704 (2)
CHEBI:189528 (1)
CHEBI:189527 (1)
CHEBI:189523 (1)
CHEBI:189519 (1)
CHEBI:189515 (1)
CHEBI:189513 (1)
CHEBI:189507 (1)
CHEBI:189506 (1)
CHEBI:189505 (1)
CHEBI:189504 (1)
CHEBI:189503 (1)
CHEBI:189502 (1)
CHEBI:189500 (1)
CHEBI:174548 (1)
CHEBI:189499 (1)
CHEBI:189497 (1)
CHEBI:189494 (1)
CHEBI:189493 (1)
CHEBI:189492 (1)
CHEBI:189491 (1)
CHEBI:189490 (1)
CHEBI:90748 (1)
CHEBI:189488 (1)
CHEBI:189484 (1)
CHEBI:189483 (1)
CHEBI:189482 (1)
CHEBI:189481 (1)
CHEBI:189480 (1)

Metabolite Name

1-({(1s,4s,6s)-6-isopropyl-3-methyl-4-[2-(4-methyl-1-piperazinyl)-2-oxoethyl]-2-cyclohexen-1-yl}methyl)-3-(3-methoxyphenyl)urea (1)
N-({(2r,4s,5r)-5-[3-(3,4-dimethoxyphenyl)-1-methyl-1h-pyrazol-5-yl]-1-azabicyclo[2.2.2]oct-2-yl}methyl)-2-ethylbutanamide (1)
Diffractic acid (1)
6-o-[(2e)-3-(4-hydroxyphenyl)-2-propenoyl]-1-o-[(2e)-3-phenyl-2-propenoyl]-beta-d-glucopyranose (1)
4-methoxybenzaldehyde n-[6-(tert-butyl)thieno[3,2-d]pyrimidin-4-yl]hydrazone (1)
4-(4-chlorophenyl)-n-(2-pyridinylmethyl)cyclohexanecarboxamide (1)
4h-1-benzopyran-4-one, 6-beta-d-glucopyranosyl-2,3-dihydro-5,7-dihydroxy-2-(4-hydroxyphenyl)-, (s)- (Hemiphloin) (1)
(3r,4s)-4,6,8-trihydroxy-7-methoxy-3-methyl-3,4-dihydro-1h-isochromen-1-one (1)
1,4:3,6-dianhydro-2,5-dideoxy-2-{[4-(3-fluorophenyl)-2-pyrimidinyl]amino}-5-[(methoxyacetyl)amino]-l-iditol (1)
Cetirizine n-oxide (1)
Adb-pinaca pentanoic acid metabolite (1)
5,8-dihydroxy-4-oxo-1,2,3,4-tetrahydro-1-naphthalenyl 6-o-(3,4,5-trihydroxybenzoyl)-beta-d-glucopyranoside (1)
Methyl (1s,4ar,6s,7r,7as)-1-(beta-d-glucopyranosyloxy)-4a,7-dihydroxy-6-{[(2e)-3-(4-hydroxyphenyl)-2-propenoyl]oxy}-7-methyl-1,4a,5,6,7,7a-hexahydrocyclopenta[c]pyran-4-carboxylate (1)
Methyl 4-{2-cyano-2-[(4-methylphenyl)sulfonyl]vinyl}-2,5-dimethyl-1h-pyrrole-3-carboxylate (1)
N-[(6as,8s)-2-(2,3-dimethylphenyl)-6,12-dioxo-5,6,6a,7,8,9,10,12-octahydropyrido[2,1-c][1,4]benzodiazepin-8-yl]nicotinamide (1)
4-[4-(4-hydroxy-3-methoxyphenyl)tetrahydro-1h,3h-furo[3,4-c]furan-1-yl]-2-methoxyphenyl hexopyranoside (1)
4-[(1s,3as,4r,6ar)-3a-hydroxy-4-(4-hydroxy-3-methoxyphenyl)tetrahydro-1h,3h-furo[3,4-c]furan-1-yl]-2-methoxyphenyl beta-d-glucopyranoside (1)
N4-acetyl sulfamethazine (1)
2-(3,4-dihydroxyphenyl)-5,7-dihydroxy-4-oxo-4h-chromen-3-yl 6-o-(6-deoxyhexopyranosyl)-4-o-[(2e)-3-(4-hydroxyphenyl)-2-propenoyl]hexopyranoside (1)
Fr 145237 (1)
Ethyl {(1s,4s,5s)-4-[(isonicotinoylamino)methyl]-5-isopropyl-2-methyl-2-cyclohexen-1-yl}acetate (1)
2-hydroxy-4-(4-hydroxyphenyl)butanoic acid (1)
2-(tert-butylsulfonyl)-3-(3-methylbenzo[b]thiophen-2-yl)acrylonitrile (1)
2-hydroxy-4-methoxy-3-(3-methyl-2-buten-1-yl)-6-[(e)-2-phenylvinyl]benzoic acid (1)
N-(2-fluorophenyl)-2-methyl-6-(trifluoromethyl)nicotinamide (1)
Metazachlor-esa (1)
Aica ribonucleotide (1)
2-[(3s)-1-(cyclohexylmethyl)-3-pyrrolidinyl]-5-fluoro-1h-benzimidazole (1)
N-(4-{(2r,3r)-3-(hydroxymethyl)-4-[(1-methyl-1h-imidazol-2-yl)methyl]-5-oxo-2-morpholinyl}phenyl)-2-methylpropanamide (1)
3-hydroxy-3,5,5-trimethyl-4-(3-oxo-1-buten-1-ylidene)cyclohexyl Beta-d-glucopyranoside (1)

First Public Date

2024 (75)
2026 (69)
2025 (50)
2023 (44)
2021 (28)
2014 (26)
2022 (25)
2018 (21)
2017 (18)
2020 (13)
2019 (13)
2015 (7)
2013 (4)
2016 (3)

Classification

bacteria (4)
helminths (2)
fungi (1)
viruses (1)
protozoa (1)

Study status

Completed (7)
Not provided (2)
Ongoing (1)
Withdrawn (1)
Not yet recruiting (1)
Recruiting (1)

Study type

Transcription profiling by array (99)
RNA-seq of coding RNA (25)
Interventional (13)
ChIP-seq (6)
Other (5)
DNA-seq (5)
RNAi profiling by array (4)
Unknown experiment type (3)
ATAC-seq (3)
RNA-seq of total RNA (3)
High-throughput sequencing (2)
MicroRNA profiling by array (2)
One-color microarray (1)
Human - High-throughput sequencing (1)
Cell line - High-throughput sequencing (1)
Comparative genomic hybridization by array (1)
Hi-C (1)
Methylation profiling by array (1)
RNA-seq of coding RNA from single cells (1)
Methylation profiling by high throughput sequencing (1)

Release Date

2022 (230)
2023 (198)
2021 (191)
2025 (179)
2020 (177)
2024 (163)
2018 (155)
2019 (139)
2016 (130)
2017 (115)
2015 (107)
2014 (94)
2013 (74)
2011 (62)
2012 (57)
2010 (55)
2008 (37)
2009 (34)
2007 (25)
2026 (22)
2005 (15)
2004 (15)
2001 (10)
2006 (9)
2003 (9)
2000 (6)
1999 (6)
2002 (5)
1998 (3)
1997 (1)

Lab affiliation

Institut für Kardiovaskuläre Physiologie, Goethe-Universität, Frankfurt am Main, Germany (2)
Amsterdam UMC, Vrije Universiteit Amsterdam, Medical Oncology, Cancer Center Amsterdam, OncoProteomics Laboratory, Amsterdam, Netherlands (1)
Associate Professor (1)
Associate Professor Glyco MS Group Copenhagen Center for Glycomics (CCG) Department of Cellular and Molecular Medicine (24.6.36) University of Copenahgen Blegdamsvej 3 2200 Copenhagen N Denmark (1)
Beijing, You An Men Wai Xi Tou Tiao No.10, Capital Medical University, Beijing Laboratory of Oral Health (1)
Boston University (1)
China Medical University (1)
Cornell University, Plant Biology section (1)
DGIST, Department of new biology, Q-Bio laboratory (1)
Department of Bioengineering, School of Engineering and Applied Sciences, University of Pennsylvania, Philadelphia, PA, USA (1)
Department of Genetics, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina 27599, USA (1)
Department of Internal Medicine, Division of Endocrinology and Metabolism, Carver College of Medicine, University of Iowa, Iowa City, Iowa, 52242 USA (1)
Department of Molecular Machines and Signaling, Max Planck Institute of Biochemistry, 82152 Martinsried, Germany (1)
Department of Molecular Machines and Signaling, Max Planck Institute of Biochemistry, Martinsried 82152, Germany (1)
Department of Molecular Microbiology & Immunology Oregon Health & Science University 3181 SW Sam Jackson Park Road Portland, Oregon 97239, USA (1)
Department of Peptide-based Immunotherapy, Institute of Immunology, University and University Hospital Tübingen, Tübingen, BW, Germany (1)
Division of Stem Cell Transplantation and Cellular Immunotherapies, Department of Medicine II, Christian-Albrechts-University Kiel and University Medical Center Schleswig-Holstein, Kiel, Germany (1)
Goethe University Frankfurt (1)
Institute of Molecular Systems Biology, Department of Biology, ETH Zurich, Zurich, Switzerland (1)
Jungers Center for Neurosciences Research Department of Neurology Oregon Health & Science University Portland, Oregon 97239, USA (1)
Neufeld and Tamman Cardiovascular Research Institutes, Sheba Medical Center, Sackler School of Medicine, Tel Aviv University, Israel. (1)
Osnabrueck University Department of Biology/Chemistry Bioanalytical chemistry section (1)
Parsons Group Randall Centre for Cell & Molecular Biophysics King's College London UK (1)
Porter School of Environment and Earth Sciences. Tel Aviv University, Tel Aviv, Israel (1)
San Raffaele Telethon Institute for Gene Therapy, IRCCS San Raffaele Scientific Institute, Milan, Italy (1)
School of Integrative Plant Science Plant Biology Section Cornell University (1)
Shemyakin-Ovchinnikov Institute of bioorganic chemistry RAS (1)
State Key Laboratory of Microbial Technology, Microbiology and Biotechnology Institute, Shandong University (1)
Tel-aviv University (1)
Translational Oncology Research Center, Vrije Universiteit Brussel (VUB), Brussels, Belgium (1)

Location

Denmark (7)
Netherlands (2)
United States (2)
Ireland (1)
Sweden (1)

Keyword

Electroporation (4)
Bleomycin (3)
Irreversible electroporation (3)
Calcium (3)
NanoKnife (2)
Ablation (2)
IRE (2)
CPG-oligonucleotide (1)
Colorectal liver metastases (CRLM) (1)
Irreversible electroporation (IRE) (1)
Colorectal liver metastasis, unresectable and not-thermally ablative due to location near vulnerable structures like vessels or bile ducts (1)
Endoscopic (1)
Outpatient (1)
Leukine (1)
TetwtCEA DNA (1)
DNA vaccine (1)
Single-center (1)
Low Energy Direct Current (1)
Ablate-and-resect (1)
Nonthermal ablation (1)
Neoplasms, primary (1)
Rectal cancer, locally advanced (1)
Antineoplastic, antibodies (1)
Pathologic processes (1)
Neoplastic processes (1)
Calcium electroporation (1)
Feasibility (1)
Human Telomerase Reverse Transcriptase (hTERT) (1)
High Risk of Relapse (1)
Post Definitive Surgery (1)

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Transcription profiling of mouse skeletal muscle after gene transfer by electroporation vs. Controls

Abstract; Background: Gene transfer by electroporation (electro gene transfer) to muscle results in high level long term transgenic expression, showing great promise for treatment of e.g. protein deficiency syndromes. However little is known about the effects of electro gene transfer on muscle fibre...

ORGANISM(S): Mus musculus

2009-04-23 | E-GEOD-6686 | biostudies-arrayexpress

Electric pulses do not change expression profile of genes involved in development of cancer in malignant melanoma cells

Electroporation is a versatile method for in vitro or in vivo delivery of different molecules into cells. However, no study so far has analysed the effects of electric pulses used in electrochemotherapy (ECT pulses) or electric pulses used in electrogene therapy (EGT pulses) on malignant cells. We s...

ORGANISM(S): Homo sapiens

2010-06-20 | E-GEOD-15420 | biostudies-arrayexpress

Overexpression of PLIN5 in skeletal muscle promotes oxidative gene expression and intramyocellular lipid content without compromising insulin sensitivity

Aims/hypothesis: While lipid deposition in skeletal muscle is considered to be involved in obesity-associated insulin resistance, neutral intramyocellular lipid (IMCL) accumulation per se does not necessarily induce insulin resistance. We previously demonstrated that overexpression of the lipid drop...

ORGANISM(S): Rattus norvegicus

2013-01-29 | E-GEOD-43832 | biostudies-arrayexpress

In vivo electroporation-based conditional oncogenic activation implicates multiple distinct cellular origins for Group3 medulloblastoma

We examined the transformation susceptibility of different cerebellar stem/progenitors by developing several new Group3 medulloblastoma murine models using orthotopic transplantation and in utero electroporation (EP)-based in vivo gene transfer with Cre/LoxP-mediated conditional Myc gene activation ...

ORGANISM(S): Mus musculus

2015-02-13 | E-GEOD-65888 | biostudies-arrayexpress

Gene expression profile at single cell level of murine neural stem cells (NSCs) subjected to bulk electroporation (BEP) and localized electroporation (LEP)

PRJNA846168 | ENA

RNA-Seq of human hematopoietic stem and progenitor cells to study membrane repair following electroporation (EP) or filtroporation (FP) disruption based strategies for intracellular delivery

This experiment investigates how different intracellular delivery methods, specifically filtroporation (FP) and electroporation (EP) affect gene editing efficiency and cellular responses in human hematopoietic stem and progenitor cells. By comparing these methods, results show how mechanical versus ...

ORGANISM(S): Homo sapiens

2025-10-30 | E-MTAB-15741 | biostudies-arrayexpress

Invasive properties of patient-derived glioblastoma cells after reversible electroporation in vitro

PRJNA1303707 | ENA

electroporation

2025-11-17 | OEX00032706 | NODE

Gene expression profile at single cell level of murine neural stem cells (NSCs) subjected to bulk electroporation (BEP) and localized electroporation (LEP)

Localized Electroporation (LEP) has emerged as an effective tool for intracellular delivery and non-destructive analysis of cells. However, little is known about the effects of LEP on cellular gene expression which may adversely impact their downstream phenotype. Here we use single cell RNA sequenci...

ORGANISM(S): Mus musculus

2023-03-10 | GSE205507 | GEO

The genes regulated by SOX11 in mantle cell lymphoma

The genes regulated by SOX11 in MCL was investigated in MCL cell line Granta 519 by siRNA knock down system. Cells were transfected using the LONZA electroporation system. Results represent cells harvested after 20 hours. Details of the experiment is published in PMID 21124928. Gene expression profi...

ORGANISM(S): Homo sapiens

2010-11-29 | E-GEOD-25621 | biostudies-arrayexpress

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