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TranscriptomicsRNA-seq of coding RNA from samples of 20 human individuals representing four cancers: glioma, colon cancer, liver cancer and testicular cancer, as well as three cell lines.
RNA-seq was performed of cancer samples from 20 human individuals representing four cancers: glioma, colon cancer, liver cancer and testicular cancer, as well as six samples from the three cell lines NTERA-2, U-87 MG och U-138 MG in order to study the human tissue transcriptome.
ORGANISM(S): Homo sapiens 
2024-02-26 | E-MTAB-4681 | biostudies-arrayexpress
TranscriptomicsNext Generation Sequencing (RNAseq) of non-small cell lung cancer
Cancer testis antigens (CTAs) are of clinical interest as biomarkers and present valuable targets for immunotherapy. To comprehensively characterize the CTA landscape of non-small cell lung cancer (NSCLC), we compared RNAseq data of 199 NSCLC tissues to the normal transcriptome of 142 samples from 3...
ORGANISM(S): Homo sapiens 
2016-06-01 | E-GEOD-81089 | biostudies-arrayexpress
ProteomicsPan-cancer plasma proteome profiling using SIS recombinant protein fragments reveals downregulation of proteins interacting with immunoglobulins in multiple myeloma
Mass spectrometry based on Data Independent Acquisition (DIA) strategies has developed into powerful tools suitable for precision medicine applications. Assays performed in this setting provide confident protein identification and precise quantification on an absolute scale when combined with stable...
ORGANISM(S): Homo Sapiens 
PXD037946 | panorama
ProteomicsH.sapiens - Cell line, U2os (Lundberg,msb,2010)
abundance based on MAPPED_BY_AUTHORS, U2OS, Interaction consistency score: 15.2, Coverage: 27
ORGANISM(S): 9606 
2010-00-00 | 3087941123 | PAXDB
ProteomicsH.sapiens - Cell line, A431 (Lundberg,msb,2010)
abundance based on MAPPED_BY_AUTHORS, A431, Interaction consistency score: 15.1, Coverage: 27
ORGANISM(S): 9606 
2010-00-00 | 986013392 | PAXDB
ProteomicsH.sapiens - Cell line, U251mg (Lundberg,msb,2010)
abundance based on MAPPED_BY_AUTHORS, U251MG, Interaction consistency score: 15.0, Coverage: 27
ORGANISM(S): 9606 
2010-00-00 | 2206792627 | PAXDB
ModelsUhlén2015 - Human tissue-based proteome metabolic network - lymph node
Uhlén2015 - Human tissue-based proteome metabolic network - lymph node Human lymph node specific proteome metabolic network This model is described in the article: Tissue-based map of the human proteome Uhlén M, Fagerberg L, Hallström BM, Lindskog C, Oksvold P, Mardinogl...
2015-01-28 | MODEL1411240016 | BioModels
ModelsUhlén2015 - Human tissue-based proteome metabolic network - stomach
Uhlén2015 - Human tissue-based proteome metabolic network - stomach Human stomach specific proteome metabolic network This model is described in the article: Tissue-based map of the human proteome Uhlén M, Fagerberg L, Hallström BM, Lindskog C, Oksvold P, Mardinoglu A, S...
2015-01-28 | MODEL1411240017 | BioModels
ModelsUhlén2015 - Human tissue-based proteome metabolic network - adipose
Uhlén2015 - Human tissue-based proteome metabolic network - adipose Human adipose tissue specific proteome metabolic network This model is described in the article: Tissue-based map of the human proteome Uhlén M, Fagerberg L, Hallström BM, Lindskog C, Oksvold P, Mardinog...
2015-01-28 | MODEL1411240001 | BioModels
ModelsUhlén2015 - Human tissue-based proteome metabolic network - bone marrow
Uhlén2015 - Human tissue-based proteome metabolic network - bone marrow Human bone marrow tissue specific proteome metabolic network This model is described in the article: Tissue-based map of the human proteome Uhlén M, Fagerberg L, Hallström BM, Lindskog C, Oksvold P, ...
2015-01-28 | MODEL1411240003 | BioModels
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