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Unknown (2197)
Transcriptomics (22)
Proteomics (20)
Models (8)
Genomics (2)
Clinical (1)
Multiomics (1)
Metabolomics (1)

Organisms

Andropogon gerardi (15)
Bacteria (15)
Botrytis cinerea (15)
Canis lupus familiaris (15)
Clostridium perfringens (15)
Cnidaria (15)
Cricetulus griseus (15)
Eukaryota (15)
Fasciola (15)
Hepatitis B virus (15)
Human betaherpesvirus 5 (15)
Japanese encephalitis virus group (15)
Madurella mycetomatis (15)
Mesocricetus auratus (15)
Homo sapiens (8)
Bos taurus (4)
Mus musculus (3)
Staphylococcus aureus (1)
Plasmodium falciparum (1)
Acinetobacter baumannii ATCC 17978 (1)
Tursiops truncatus (1)
Synechocystis sp. PCC 6803 (1)
Chlamydomonas reinhardtii (1)
Clostridium beijerinckii NCIMB 8052 (1)
Schizosaccharomyces pombe (1)
Helicobacter pylori (1)
Oryctolagus cuniculus (1)
Gadus morhua (1)
Canis lupus familiaris (1)
Rattus norvegicus (1)

Repository

biostudies-arrayexpress (23)
pride (15)
BioModels (8)
MassIVE (5)
MetaboLights (1)
ENA (1)

Tissue

Cell culture (3)
Blood serum (2)
Epithelial cell (2)
Blood cell (1)
Blood plasma (1)
Brain (1)
Cell suspension culture (1)
Leaf (1)
Microglial cell (1)
Saliva (1)

Disease

Malignant neoplasm of colon (1)
Colon cancer (1)

Technology Type

Mass Spectrometry (15)
Shotgun proteomics (10)
Top-down proteomics (3)
Mass spectrometry (1)
Affinity purification coupled with mass spectrometry proteomics (1)
All-ion fragmentation (1)
Chemical cross-linking coupled with mass spectrometry proteomics (1)
Data-dependent acquisition (1)
Gel-based experiment (1)

Instrument Platform

Q Exactive (3)
Illumina NovaSeq 6000 (1)
Orbitrap Fusion Lumos (1)
Q-Exactive HFX (1)
Liquid Chromatography MS - alternating - reverse phase (1)

Publication Date

2024 (9)
2023 (7)
2011 (5)
2014 (4)
2020 (4)
2015 (3)
2012 (3)
2010 (3)
2022 (3)
2016 (2)
2025 (2)
2021 (1)
2013 (1)
2009 (1)
2006 (1)
2017 (1)
2026 (1)
2019 (1)

CHEBI ID

CHEBI:38068 (1)
CHEBI:6080 (1)
CHEBI:79516 (1)
CHEBI:42156 (1)
CHEBI:34571 (1)
CHEBI:63924 (1)
CHEBI:178256 (1)
CHEBI:136975 (1)
CHEBI:164200 (1)
CHEBI:141315 (1)
CHEBI:34240 (1)
CHEBI:171798 (1)
CHEBI:34595 (1)
CHEBI:4866 (1)
CHEBI:10432 (1)
CHEBI:64983 (1)
CHEBI:28744 (1)
CHEBI:23965 (1)
CHEBI:6698 (1)
CHEBI:4903 (1)
CHEBI:1189 (1)
CHEBI:28955 (1)
CHEBI:81556 (1)
CHEBI:27974 (1)
CHEBI:34445 (1)
CHEBI:17243 (1)
CHEBI:34778 (1)
CHEBI:18088 (1)
CHEBI:34687 (1)
CHEBI:3908 (1)

Metabolite Name

Riddeliin (1)
Benzylbutylphthalate (1)
Benzophenone 1 (1)
Alternariolmonomethylether (1)
4-Methoxyestradiol (1)
2-Naphtol (1)
1-OH-pyrene (1)
4-tert-octylphenol (1)
Isoxanthohumol (1)
Nonylphenol (1)
Estradiol-3-sulfate (1)
17-Epiestriol (1)
Isobutylparaben (1)
Ethinylestradiol (1)
Benzylparaben (1)
Dibutylphthalate (1)
2-Hydroxyestradiol (1)
Triclosan (1)
Jacobine (1)
MEHP (1)
Monobutylphthalate (1)
2-Methoxyestradiol (1)
Resveratrol (1)
Matairesinol (1)
Butylparaben (1)
Ethylparaben (1)
Genistein (1)
Enterodiol (1)
Coumestrol (1)
Glycitein (1)

IsPrivate

False (8)

Submitter Keywords

FAIR-AIML (8)
Machine Learning Model (8)
Ersilia (5)

First Public Date

2022 (1)

Modelling Approach

Computational model (6)
Machine learning (1)
Other (1)

Study status

Recruiting (1)

Study type

Transcription profiling by array (16)
RNA-seq of coding RNA (4)
Cell line - Methylation microarray (1)
Unknown experiment type (1)
ChIP-seq (1)
Observational (1)

Release Date

2025 (317)
2023 (314)
2022 (311)
2024 (295)
2021 (243)
2020 (176)
2019 (119)
2018 (94)
2017 (70)
2016 (57)
2026 (54)
2014 (42)
2015 (36)
2011 (21)
2013 (16)
2012 (15)
2009 (11)
2008 (9)
2010 (8)
2005 (6)
2006 (3)
2007 (1)
2004 (1)
2001 (1)

Lab affiliation

Biomarkers and Alternative Models Branch Division of Systems Biology National Center for Toxicological Research U.S. Food and Drug Administration 3900 NCTR Rd., HFT-233 Jefferson, AR 72079 USA (1)
Bowling Green State University (1)
Cornell University (1)
Delaware Biotechnology Institute, Department of Chemical and Biomolecular Engineering, University of Delaware (1)
Department of Biomedical Engineering, College of Life Science and Technology, Huazhong University of Science and Technology, N0. 1037 Luoyudong Road, Hongshan District, Wuhan 430074 (1)
Department of Microbiology, Biomedicine Discovery Institute, Monash University, Clayton, VIC 3800, Australia. Pok Man Leung, pok.leung@monash.edu, Department of Microbiology, Biomedicine Discovery Institute, Monash University, Clayton, VIC 3800, Australia Ralf B. Schittenhelm, ralf.schittenhelm@monash.edu, Monash Proteomics and Metabolomics Facility and Department of Biochemistry, Monash Biomedicine Discovery Institute, Monash University, Clayton, VIC 3800, Australia (1)
Division of Animal Genetics and Breeding, Faculty of Veterinary Sciences and Animal Husbandry, SKUAST-Kashmir, India (1)
Emory University School of Medicine Departments of Biochemistry and Neurology (1)
INSERM ACTION U1218, Institut Bergonié, 33076 Bordeaux Cedex, FRANCE (1)
Institute of Parasitology, Centre for Biology, Academy of Science of the Czech Republic, Czech Republic Faculty of Science, University of South Bohemia in Ceske Budejovice, Czech Republic (1)
Max Delbrück Center for Molecular Medicine Berlin and Charite Berlin (1)
Michigan State University (1)
Spanish National Center for Biotechnology (CNB-CSIC) (1)
Teagasc (1)
VIB Center for Medical Biotechnology, VIB, Ghent,Belgium Department of Biomolecular Medicine, Ghent University, Ghent, Belgium (1)