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MetabolomicsAkkermansia muciniphila alleviates endoplasmic reticulum stress via activation of farnesoid X receptors in colitis

Endoplasmic reticulum (ER) stress-related mucin depletion could be involved in the pathogenesis of inflammatory bowel disease (IBD). Akkermansia muciniphila (A. muciniphila) uses mucin as its sole energy source and shows potential in the treatment of colitis. However, the effects and underlying m...

2025-10-09 | MTBLS13104 | MetaboLights
TranscriptomicsX-inactivation in hESCs
X chromosome inactivation (XCI) is a dosage compensation mechanism in female cells to regulate X-linked gene expression. We report here that subcultures from established lines of female hESCs displayed variations (0-100%) in the expression of XCI markers such as XIST RNA coating and enrichment of h...
ORGANISM(S): Homo sapiens 
2010-05-26 | E-GEOD-9637 | biostudies-arrayexpress
TranscriptomicsFemale-specific CTCF binding on the inactive X chromosome in mouse
In mammals, genes located on the X chromosome are present in one copy in XY males and two in XX females. To balance the dosage of X-linked gene expression between the sexes one of the two X chromosomes in females is silenced by X inactivation initiated by up-regulation of the lncRNA (long non-coding...
ORGANISM(S): Mus musculus 
2015-02-26 | E-GEOD-66262 | biostudies-arrayexpress
UnknownX-ray fan beam coded aperture transmission and diffraction imaging for fast material analysis.
Not available
S-EPMC8134570 | biostudies-literature
TranscriptomicsNucleophosmin binding on the mouse X chromosomes
In mammals, one of the female X chromosomes and all imprinted genes are expressed exclusively from a single allele in somatic cells. To evaluate structural changes associated with allelic silencing, we have applied a recently developed Hi-C assay that uses DNase I for chromatin fragmentation to mous...
ORGANISM(S): Mus musculus 
2015-08-11 | E-GEOD-71903 | biostudies-arrayexpress
GenomicsEscape from X inactivation in mouse tissues (ChIP-Seq)
X chromosome inactivation (XCI) silences most genes on one X chromosome in female mammals, but some genes escape XCI. To identify escape gene in vivo and to explore molecular mechanisms that regulate this process we analyzed the allele-specific expression and chromatin structure of X-linked genes in...
ORGANISM(S): Mus musculus x Mus spretus 
2015-02-20 | E-GEOD-59778 | biostudies-arrayexpress
MetabolomicsUntargeted Metabolomics Analysis Reveals Aberrant Long-Chain Fatty Acids Metabolism in Relapsing-Remitting Multiple Sclerosisublication title

Background: Growing evidence indicates significant alterations in fatty acid metabolism in patients with relapsing-remitting multiple sclerosis (RRMS). However, the metabolic status of long-chain fatty acids (LCFAs), including mono-unsaturated fatty acids (MUFAs) and poly-unsaturated fatty acids ...

2026-03-23 | MTBLS13949 | MetaboLights
UnknownThree-dimensional structure of the 3'X-tail of hepatitis C virus RNA in monomeric and dimeric states.
Not available
S-EPMC5558915 | biostudies-literature
GenomicsX-chromosome dosage compensation dynamics in human early embryos
X-chromosome dosage compensation dynamics in human early embryos
PRJNA533639 | ENA
TranscriptomicsDNA microarrays of Turner Syndrome induced pluripotent stem cells
We have generated iPSCs from monosomy X (Turner Syndrome), trisomy 8 (Warkany Syndrome 2), trisomy 13 (Patau Syndrome) and partial trisomy 11;22 (Emanuel Syndrome), using either skin fibroblasts from affected individuals or amniocytes from antenatal diagnostic tests. These cell lines stably maintain...
ORGANISM(S): Homo sapiens 
2011-10-03 | E-GEOD-32527 | biostudies-arrayexpress
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