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Proteomics
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Transcriptomics
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Genomics
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Models
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Genomic
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Organisms
Homo sapiens
(176)
Mus musculus
(59)
Caenorhabditis elegans
(24)
Arabidopsis thaliana
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Oryza sativa
(9)
Rattus norvegicus
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Escherichia coli
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Triticum aestivum
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Drosophila melanogaster
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Aspergillus flavus NRRL3357
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Glycine max
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Oryza sativa Japonica Group
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Saccharomyces cerevisiae
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Candida albicans
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Scutellaria baicalensis
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Phaeodactylum tricornutum
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Synechocystis sp. PCC 6803
(2)
Nostoc sp. PCC 7120 = FACHB-418
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Coccomyxa subellipsoidea C-169
(1)
Plutella xylostella
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Beauveria bassiana ARSEF 2860
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Metarhizium acridum
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Culex quinquefasciatus
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Leishmania donovani
(1)
Brassica rapa subsp. pekinensis
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Mytilus edulis
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Brassica rapa
(1)
Equus caballus
(1)
Gallus gallus
(1)
Organisms
Mus musculus
(7)
Hordeum vulgare subsp. spontaneum
(1)
Caenorhabditis elegans
(1)
Repository
iProX
(175)
biostudies-arrayexpress
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pride
(132)
MetaboLights
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EGA
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MassIVE
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ENA
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geo
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Tissue
Cell culture
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Disease
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Disease free
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Type 1 diabetes mellitus
(2)
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(2)
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(2)
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High Grade Ovarian Serous Adenocarcinoma
(1)
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Obesity
(1)
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(1)
Lymphoma
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Melanoma
(1)
Pancreatic cancer
(1)
Bladder transitional cell carcinoma
(1)
Technology Type
Mass Spectrometry
(132)
Shotgun proteomics
(72)
Mass spectrometry
(35)
Bottom-up proteomics
(18)
Data-dependent acquisition
(14)
Data-independent acquisition
(11)
Affinity purification coupled with mass spectrometry proteomics
(10)
Gel-based experiment
(7)
Top-down proteomics
(6)
Mass spectrometry assay
(4)
Illumina HiSeq 2000
(2)
Proteogenomics
(2)
Immunopeptidomics
(2)
All-ion fragmentation
(2)
Illumina Genome Analyzer II, Illumina HiSeq 2000
(1)
Mass spectrometry imaging
(1)
RNA mass spectrometry
(1)
DiaPASEF
(1)
SWATH MS
(1)
SRM/MRM
(1)
Chemical cross-linking coupled with mass spectrometry proteomics
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Instrument Platform
Liquid Chromatography MS - positive - reverse phase
(18)
Liquid Chromatography MS - negative - reverse phase
(17)
Q Exactive
(6)
LTQ Orbitrap Velos
(5)
Gas Chromatography MS - positive
(4)
Liquid Chromatography MS - positive - hilic
(4)
Illumina HiSeq 2000
(3)
Orbitrap Fusion Lumos
(3)
LTQ
(3)
Liquid Chromatography MS - negative - hilic
(3)
Illumina HiSeq 1500
(2)
Illumina HiSeq 2500
(2)
LTQ Orbitrap Elite
(2)
LTQ Orbitrap XL
(2)
Q Exactive HF
(2)
MS Imaging -
(2)
Liquid Chromatography MS - alternating - hilic
(2)
Covaris E220evolution
(1)
Illumina HiSeq 1000
(1)
BGISEQ-500
(1)
Illumina NovaSeq 6000
(1)
NextSeq 500
(1)
Q Exactive Plus
(1)
LTQ Velos
(1)
Orbitrap Fusion
(1)
Agilent5975C
(1)
Liquid Chromatography MS - alternating – hilic
(1)
Tandem Gas Chromatography MS - positive
(1)
Direct infusion MS - negative
(1)
Liquid Chromatography MS - alternating
(1)
Publication Date
2022
(51)
2024
(44)
2023
(41)
2011
(40)
2025
(40)
2014
(28)
2026
(26)
2021
(22)
2012
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2015
(18)
2018
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(14)
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2010
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2016
(12)
2017
(12)
2009
(7)
2006
(3)
2005
(2)
2007
(2)
2008
(1)
UNIPROT ID/AC
NAP1_YEAST
(1)
GGC1_YEAST
(1)
CBK1_YEAST
(1)
MCFS1_YEAST
(1)
ARI1_YEAST
(1)
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(1)
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DHYS_YEAST
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SF3B1_YEAST
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TYW1_YEAST
(1)
MS116_YEAST
(1)
ARMT1_YEAST
(1)
4932.YMR051C
(1)
EIF3J_YEAST
(1)
SOK1_YEAST
(1)
END3_YEAST
(1)
ENSEMBL ID
ENSG00000204131
(2)
ENSG00000229353
(2)
ENSG00000247315
(2)
ENSG00000147251
(2)
ENSG00000170477
(2)
CHEBI ID
CHEBI:17596
(18)
CHEBI:16704
(17)
CHEBI:17568
(16)
CHEBI:17368
(16)
CHEBI:17895
(15)
CHEBI:15756
(15)
CHEBI:30769
(15)
CHEBI:16708
(14)
CHEBI:16750
(14)
CHEBI:17154
(14)
CHEBI:16335
(14)
CHEBI:17509
(14)
CHEBI:17295
(14)
CHEBI:17562
(13)
CHEBI:28875
(13)
CHEBI:16015
(13)
CHEBI:32816
(13)
CHEBI:16737
(13)
CHEBI:17992
(12)
CHEBI:15741
(12)
CHEBI:30746
(12)
CHEBI:16196
(12)
CHEBI:16235
(12)
CHEBI:16467
(12)
CHEBI:18019
(12)
CHEBI:17203
(12)
CHEBI:18050
(12)
CHEBI:16919
(12)
CHEBI:16414
(12)
CHEBI:17191
(12)
Metabolite Name
Inosine
(12)
Uracil
(11)
Xanthine
(11)
Uridine
(11)
L-Tyrosine
(11)
Hypoxanthine
(11)
Citric acid
(9)
Adenosine
(9)
Guanine
(9)
Adenine
(9)
Cytidine
(9)
Guanosine
(9)
Taurine
(8)
Uric acid
(8)
Pyruvic acid
(7)
Glutathione
(7)
Stearic acid
(7)
Palmitic acid
(7)
Azelaic acid
(7)
Myristic acid
(7)
Creatinine
(7)
L-Phenylalanine
(7)
L-Alanine
(6)
Ornithine
(6)
L-Arginine
(6)
Palmitoleic acid
(6)
Taurocholic acid
(6)
Arachidonic acid
(6)
Melatonin
(6)
L-Tryptophan
(6)
First Public Date
2017
(4)
2023
(2)
2026
(1)
2022
(1)
2018
(1)
2016
(1)
Modelling Approach
Ordinary differential equation model
(2)
Lab affiliation
Cellzome
(7)
Agronomy College, Henan Agricultural University, China
(4)
SJTU
(2)
Broad Institute
(2)
DZNE Munich, Neuroproteomics, Feodor-Lynen Str. 17, 81377 Munich, Germany
(2)
Nankai University
(2)
Northeast Normal University
(2)
Institute of Molecular Systems Biology, Department of Biology, ETH Zurich, Zurich, Switzerland.
(2)
Agronomy College/National Key Laboratory of Wheat and Corn Crop/Collaborative Innovation Center of Henan Grain Crops, Henan Agricultural University ,Zhengzhou China
(2)
Guangzhou National Laboratory, Guangzhou 510005, China
(1)
Master program for clinical pharmacogehomics and pharmacoprotemics Chia-Li Han LAB.Taipei
(1)
Department of Gynecological Oncology, Tongji Hospital, Tongji Medical College,Huazhong University of Science and Technology
(1)
SULFAGING group, Leibniz-Institut für Analytische Wissenschaften – ISAS – e.V., DORTMUND, GERMANy
(1)
Systems Biology of Pain,Division of Pharmacology & Toxicology, Department of Pharmaceutical Sciences, University of Vienna
(1)
Changchun Veterinary Research Institute
(1)
State Key Laboratory of Cardiovascular Disease, Fuwai Hospital, National Center for Cardiovascular Diseases, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing 100037, China
(1)
The Netherlands Cancer Institute Proteomics Facility, Plesmanlaan 121, 1066CX, Amsterdam, The Netherlands
(1)
1Department of Pathology, Dana-Farber/Harvard Cancer Center, PhD Program in Immunology, Harvard Medical School; Department of Laboratory Medicine, Boston Children's Hospital, Enders Research Building, Room 811, Boston, MA, 02115, USA
(1)
Mass Spectrometry & Metabolomics Facility at Westlake University
(1)
Doctor at Tongji Hospital, Huazhong University of Science and Technology, Wuhan, China
(1)
College of Life Sciences and Oceanography, Shenzhen University, Shenzhen, 518060, China
(1)
State Key Laboratory of Proteomics, Beijing Proteome Research Center,
(1)
College of Life Sciences, Northwest University, 229 Taibai North Road, Xi’an, Shaanxi 710069, China
(1)
Stem Cell Research Center, Ren Ji Hospital, School of Medicine, Shanghai Jiao Tong University, Shanghai, 200127, China
(1)
Institute for Diabetes and Obesity (IDO),Helmholtz Zentrum München
(1)
Key Laboratory of Systems Biomedicine (Ministry of Education), Shanghai Center for Systems Biomedicine, Shanghai Jiao Tong University, 800 Dongchuan Road, Shanghai 200240, China
(1)
Department of Biochemistry and Cell Biology, Boston University Chobanian and Avedisian School of Medicine, Boston, MA 02118, USA National Emerging Infectious Diseases Laboratories (NEIDL), Boston University, Boston, MA 02118, USA
(1)
Department of Nutrition, Center for Proteomics and Bioinformatics, School of Medicine, Case Western Reserve University, Cleveland, Ohio, USA; Case Center for Synchrotron Biosciences, Brookhaven National Laboratory, Upton, New York, USA
(1)
College of Animal Science and Technology, China Agricultural University.College of Animal Science and Technology, China Agricultural University.
(1)
Guangdong Medical University
(1)
Tags
xref:PubMed:38413834
(2)
xref:PubMed:27100818
(1)
xref:PubMed:29505847
(1)
xref:PubMed:24532782
(1)
IsPrivate
False
(2)
Modification
4-tetrahydrothiazine-3-carboxylic acid
(1)
Study type
Transcription profiling by array
(65)
ChIP-seq
(39)
RNA-seq of coding RNA
(27)
ChIP-chip by tiling array
(5)
Methylation profiling by high throughput sequencing
(5)
Other
(3)
Comparative genomic hybridization by array
(2)
Methylation profiling by array
(2)
Animal - High-throughput sequencing
(1)
Cell line - High-throughput sequencing
(1)
Genotyping by array
(1)
Transcription profiling by RT-PCR
(1)
ATAC-seq
(1)
RNA-seq of non coding RNA
(1)
Release Date
2025
(1339)
2022
(1151)
2023
(1140)
2024
(1049)
2021
(839)
2020
(630)
2019
(445)
2018
(407)
2017
(334)
2016
(297)
2015
(223)
2026
(176)
2014
(172)
2013
(106)
2012
(96)
2011
(82)
2010
(42)
2009
(26)
2008
(19)
2007
(13)
2006
(10)
2004
(6)
2005
(4)
2002
(4)
2003
(3)
1999
(1)
1998
(1)
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Integrated Metabolomics Approach Reveals the Dynamic Variations of Metabolites and Bioactivities in
Paeonia ostii
'Feng Dan' Leaves during Development.
Not available
S-EPMC10816844
|
biostudies-literature
Cite
Single-cell RNA sequencing of total lung cells from Atg14f/f,Atg14f/f-CD11c-cre, Atg14f/f-LysM-cre mice
Single-cell RNA sequencing of total lung cells from Atg14f/f,Atg14f/f-CD11c-cre, Atg14f/f-LysM-cre mice
PRJNA831569
|
ENA
Cite
Two new species of Megacanthaspis Takagi (Hemiptera, Sternorrhyncha, Coccoidea, Diaspididae) from China.
Not available
S-EPMC3406450
|
biostudies-literature
Cite
A network pharmacology-based approach to analyse potential targets of traditional herbal formulas: An example of Yu Ping Feng decoction.
Not available
S-EPMC6065326
|
biostudies-literature
Cite
A new species of Coccus (Hemiptera, Coccoidea, Coccidae) from China.
Not available
S-EPMC3520103
|
biostudies-literature
Cite
A review of the genus Megapulvinaria Young (Hemiptera, Coccoidea, Coccidae) from China, with a description of a new species.
Not available
S-EPMC3487642
|
biostudies-literature
Cite
Yu-Ping-Feng-San improve the immunosuppression of microenvironment in hepatocellular carcinoma by promoting the maturation of DCs through the JAK2-STAT3 pathway.
Not available
S-EPMC11682348
|
biostudies-literature
Cite
A new species of Pseudaulacaspis MacGillivray, 1921 from China (Hemiptera, Coccoidea, Diaspididae) with a key to Chinese species.
Not available
S-EPMC3406451
|
biostudies-literature
Cite
Bulk RNA sequencing of total lung cells from Atg14f/f and Atg14f/f-LysM-cre mice.
Bulk RNA sequencing of total lung cells from Atg14f/f and Atg14f/f-LysM-cre mice.
PRJNA1438104
|
ENA
Cite
Bulk RNA sequencing of total lung cells from 14 dpi of high-dose mtb on Atg14f/f and Atg14f/f-LysM-cre mice.
Bulk RNA sequencing of total lung cells from 14 dpi of high-dose mtb on Atg14f/f and Atg14f/f-LysM-cre mice.
PRJNA1027360
|
ENA
Cite
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