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Unknown
(8492)
Proteomics
(307)
Transcriptomics
(109)
Genomics
(73)
Metabolomics
(40)
Models
(2)
Genomic
(1)
Organisms
Homo sapiens
(224)
Mus musculus
(83)
Caenorhabditis elegans
(24)
Arabidopsis thaliana
(15)
Triticum aestivum
(12)
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Aspergillus flavus NRRL3357
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Coccomyxa subellipsoidea C-169
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Plutella xylostella
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Beauveria bassiana ARSEF 2860
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Metarhizium acridum
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Culex quinquefasciatus
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Leishmania donovani
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Brassica rapa subsp. pekinensis
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Mytilus edulis
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Brassica rapa
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Equus caballus
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Gallus gallus
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Organisms
Mus musculus
(7)
Hordeum vulgare subsp. spontaneum
(1)
Caenorhabditis elegans
(1)
Repository
biostudies-arrayexpress
(153)
iProX
(149)
pride
(132)
MetaboLights
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EGA
(18)
MassIVE
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ENA
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jPOST
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geo
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Tissue
Cell culture
(29)
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(7)
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(3)
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(3)
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(3)
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(3)
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(2)
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(1)
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Ovary
(1)
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Breast cancer
(6)
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(5)
Disease free
(3)
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(2)
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(2)
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(2)
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(2)
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(1)
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(1)
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(1)
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(1)
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(1)
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(1)
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(1)
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(1)
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(1)
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(1)
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(1)
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(1)
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(1)
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(1)
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(1)
Severe acute respiratory syndrome
(1)
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(1)
Vascular myelopathy
(1)
Technology Type
Mass Spectrometry
(132)
Shotgun proteomics
(72)
Mass spectrometry
(35)
Bottom-up proteomics
(18)
Data-dependent acquisition
(14)
Data-independent acquisition
(11)
Affinity purification coupled with mass spectrometry proteomics
(10)
Gel-based experiment
(7)
Top-down proteomics
(6)
Mass spectrometry assay
(4)
Illumina HiSeq 2000
(2)
All-ion fragmentation
(2)
Immunopeptidomics
(2)
Proteogenomics
(2)
Illumina Genome Analyzer II, Illumina HiSeq 2000
(1)
Chemical cross-linking coupled with mass spectrometry proteomics
(1)
DiaPASEF
(1)
Mass spectrometry imaging
(1)
RNA mass spectrometry
(1)
SRM/MRM
(1)
SWATH MS
(1)
Instrument Platform
Liquid Chromatography MS - positive - reverse phase
(18)
Liquid Chromatography MS - negative - reverse phase
(17)
Q Exactive
(6)
LTQ Orbitrap Velos
(5)
Gas Chromatography MS - positive
(4)
Liquid Chromatography MS - positive - hilic
(4)
Illumina HiSeq 2000
(3)
Orbitrap Fusion Lumos
(3)
LTQ
(3)
Liquid Chromatography MS - negative - hilic
(3)
Illumina HiSeq 1500
(2)
Illumina HiSeq 2500
(2)
LTQ Orbitrap Elite
(2)
LTQ Orbitrap XL
(2)
Q Exactive HF
(2)
Liquid Chromatography MS - alternating - hilic
(2)
MS Imaging -
(2)
Covaris E220evolution
(1)
Illumina HiSeq 1000
(1)
BGISEQ-500
(1)
Illumina NovaSeq 6000
(1)
NextSeq 500
(1)
Q Exactive Plus
(1)
LTQ Velos
(1)
Orbitrap Fusion
(1)
API 5500 QTRAP (AB Sciex)
(1)
Agilent5975C
(1)
Direct infusion MS - negative
(1)
Gas Chromatography MS - Positive (GC-MS (Positive))
(1)
LTQ Orbitrap Velos (Thermo Scientific)
(1)
Publication Date
2023
(69)
2022
(61)
2024
(58)
2025
(48)
2011
(40)
2014
(28)
2026
(27)
2021
(25)
2015
(18)
2012
(18)
2019
(17)
2020
(14)
2013
(14)
2018
(13)
2010
(13)
2016
(12)
2017
(12)
2009
(7)
2006
(3)
2005
(2)
2007
(2)
2008
(1)
UNIPROT ID/AC
2AAA_YEAST
(1)
2NDP_YEAST
(1)
3HAO_YEAST
(1)
4932.YBR084C-A
(1)
4932.YDL191W
(1)
4932.YDR025W
(1)
4932.YEL054C
(1)
4932.YER102W
(1)
4932.YER117W
(1)
4932.YER137C-A
(1)
4932.YER159C-A
(1)
4932.YGR161C-C
(1)
4932.YGR161W-B
(1)
4932.YGR296C-A
(1)
4932.YHR055C
(1)
4932.YHR218W-A
(1)
4932.YIL018W
(1)
4932.YIL069C
(1)
4932.YJR145C
(1)
4932.YKR059W
(1)
4932.YKR094C
(1)
4932.YLL066C
(1)
4932.YLL067C
(1)
4932.YLR035C-A
(1)
4932.YLR157C-A
(1)
4932.YLR227W-A
(1)
4932.YLR467W
(1)
4932.YML026C
(1)
4932.YML040W
(1)
4932.YML133W-A
(1)
ENSEMBL ID
ENSG00000147251
(2)
ENSG00000170477
(2)
ENSG00000204131
(2)
ENSG00000229353
(2)
ENSG00000247315
(2)
CHEBI ID
CHEBI:17596
(18)
CHEBI:16704
(17)
CHEBI:17368
(16)
CHEBI:17568
(16)
CHEBI:15756
(15)
CHEBI:17895
(15)
CHEBI:30769
(15)
CHEBI:16335
(14)
CHEBI:16708
(14)
CHEBI:16750
(14)
CHEBI:17154
(14)
CHEBI:17295
(14)
CHEBI:17509
(14)
CHEBI:16015
(13)
CHEBI:16737
(13)
CHEBI:17562
(13)
CHEBI:28875
(13)
CHEBI:32816
(13)
CHEBI:15741
(12)
CHEBI:16196
(12)
CHEBI:16235
(12)
CHEBI:16414
(12)
CHEBI:16467
(12)
CHEBI:16919
(12)
CHEBI:17191
(12)
CHEBI:17203
(12)
CHEBI:17351
(12)
CHEBI:17992
(12)
CHEBI:18019
(12)
CHEBI:18050
(12)
Metabolite Name
Inosine
(12)
Hypoxanthine
(11)
L-Tyrosine
(11)
Uridine
(11)
Xanthine
(11)
Uracil
(10)
Adenine
(9)
Adenosine
(9)
Guanine
(9)
Citric acid
(8)
Cytidine
(8)
Guanosine
(8)
Taurine
(8)
Uric acid
(8)
Azelaic acid
(7)
Creatinine
(7)
Glutathione
(7)
L-Phenylalanine
(7)
Myristic acid
(7)
Palmitic acid
(7)
Pyruvic acid
(7)
Stearic acid
(7)
Arachidonic acid
(6)
Creatine
(6)
Dodecanoic acid
(6)
L-Alanine
(6)
L-Arginine
(6)
L-Isoleucine
(6)
L-Tryptophan
(6)
Melatonin
(6)
First Public Date
2017
(4)
2023
(2)
2026
(1)
2022
(1)
2018
(1)
2016
(1)
Modelling Approach
Ordinary differential equation model
(2)
Lab affiliation
Cellzome
(7)
Agronomy College, Henan Agricultural University, China
(4)
Agronomy College/National Key Laboratory of Wheat and Corn Crop/Collaborative Innovation Center of Henan Grain Crops, Henan Agricultural University ,Zhengzhou China
(2)
Broad Institute
(2)
DZNE Munich, Neuroproteomics, Feodor-Lynen Str. 17, 81377 Munich, Germany
(2)
Institute of Molecular Systems Biology, Department of Biology, ETH Zurich, Zurich, Switzerland.
(2)
Nankai University
(2)
Northeast Normal University
(2)
SJTU
(2)
1 Shanghai Key Laboratory of Tuberculosis, Shanghai Pulmonary Hospital, Tongji University School of Medicine, Shanghai 200433, PR China 2 Department of Microbiology and Immunology, Tongji University School of Medicine, Shanghai 200049, PR China 3 Clinical Translation Research Center, Shanghai Pulmonary Hospital, Tongji University School of Medicine, Shanghai 200433, China.
(1)
1.College of Veterinary Medicine, College of Animal Science, Jilin University, Changchun, 130062, China. 2. Changchun Veterinary Research Institute, Chinese Academy of Agricultural Sciences, Changchun, 130122, China.
(1)
1Department of Chemistry, University of California, Riverside
(1)
1Department of Pathology, Dana-Farber/Harvard Cancer Center, PhD Program in Immunology, Harvard Medical School; Department of Laboratory Medicine, Boston Children's Hospital, Enders Research Building, Room 811, Boston, MA, 02115, USA
(1)
Analytical Research Center for Organic and Biological Molecules, Shanghai Institute of Materia Medica, Chinese Academy of Sciences, 555 Zu Chong Zhi Road, Shanghai 201203, China
(1)
BBE, Caltech
(1)
BBE, Tsui-Fen Chou's lab, Caltech, USA
(1)
Biomolecular Mass Spectrometry and Proteomics, Bijvoet Center for Biomolecular Research and Utrecht Institute for Pharmaceutical Sciences, Utrecht University, Padualaan 8, 3584 CH Utrecht, The Netherlands Singapore Immunology Network (SIgN), Agency for Science, Technology and Research (A*STAR), 138648 Singapore, Singapore. Department of Pharmacy, National University of Singapore, 117543, Singapore, Singapore.
(1)
Biomolecular Mass Spectrometry and Proteomics, Bijvoet Center for Biomolecular Research, Utrecht University, Utrecht, The Netherlands; Utrecht Institute for Pharmaceutical Sciences, Utrecht University, Utrecht
(1)
Capital Institute of Pediatrics
(1)
Changchun Veterinary Research Institute
(1)
Changchun Veterinary Research Institute, Chinese Academy of Agricultural Sciences, and Jilin University
(1)
Children's Hospital of Fudan University
(1)
Children's Hospital, Zhejiang University School of Medicine, National Clinical Research Center for Child Health, Hangzhou, Zhejiang 310052, China
(1)
Chinese Academy of Agricultural Sciences, Institute of Apiscultural Research
(1)
Chinese Academy of Sciences Shanghai Institute of Materia Medica
(1)
College of Agronomy, Henan Agricultural University/Collaborative Innovation Center of Henan Grain Crops, Zhengzhou 450002, China
(1)
College of Agronomy, Shandong Agricultural University, Tai’an, China
(1)
College of Animal Science and Technology, China Agricultural University.College of Animal Science and Technology, China Agricultural University.
(1)
College of Life Sciences and Oceanography, Shenzhen University, Shenzhen, 518060, China
(1)
College of Life Sciences, Northwest University, 229 Taibai North Road, Xi’an, Shaanxi 710069, China
(1)
Tags
xref:PubMed:38413834
(2)
xref:PubMed:24532782
(1)
xref:PubMed:27100818
(1)
xref:PubMed:29505847
(1)
xref:EuropePMC:PMC13155725
(1)
IsPrivate
False
(2)
Modification
4-tetrahydrothiazine-3-carboxylic acid
(1)
Study type
Transcription profiling by array
(65)
ChIP-seq
(39)
RNA-seq of coding RNA
(26)
ChIP-chip by tiling array
(5)
Methylation profiling by high throughput sequencing
(5)
Other
(3)
Comparative genomic hybridization by array
(2)
Methylation profiling by array
(2)
Animal - High-throughput sequencing
(1)
Cell line - High-throughput sequencing
(1)
Genotyping by array
(1)
Transcription profiling by RT-PCR
(1)
ATAC-seq
(1)
RNA-seq of non coding RNA
(1)
Release Date
2025
(1342)
2022
(1151)
2023
(1143)
2024
(1061)
2021
(840)
2020
(630)
2019
(445)
2018
(407)
2017
(334)
2016
(297)
2015
(223)
2026
(188)
2014
(172)
2013
(106)
2012
(95)
2011
(82)
2010
(42)
2009
(26)
2008
(19)
2007
(13)
2006
(10)
2004
(6)
2005
(4)
2002
(4)
2003
(3)
1999
(1)
1998
(1)
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Integrated Metabolomics Approach Reveals the Dynamic Variations of Metabolites and Bioactivities in
Paeonia ostii
'Feng Dan' Leaves during Development.
Not available
S-EPMC10816844
|
biostudies-literature
Cite
Single-cell RNA sequencing of total lung cells from Atg14f/f,Atg14f/f-CD11c-cre, Atg14f/f-LysM-cre mice
Single-cell RNA sequencing of total lung cells from Atg14f/f,Atg14f/f-CD11c-cre, Atg14f/f-LysM-cre mice
PRJNA831569
|
ENA
Cite
Two new species of Megacanthaspis Takagi (Hemiptera, Sternorrhyncha, Coccoidea, Diaspididae) from China.
Not available
S-EPMC3406450
|
biostudies-literature
Cite
A network pharmacology-based approach to analyse potential targets of traditional herbal formulas: An example of Yu Ping Feng decoction.
Not available
S-EPMC6065326
|
biostudies-literature
Cite
A new species of Coccus (Hemiptera, Coccoidea, Coccidae) from China.
Not available
S-EPMC3520103
|
biostudies-literature
Cite
A review of the genus Megapulvinaria Young (Hemiptera, Coccoidea, Coccidae) from China, with a description of a new species.
Not available
S-EPMC3487642
|
biostudies-literature
Cite
Yu-Ping-Feng-San improve the immunosuppression of microenvironment in hepatocellular carcinoma by promoting the maturation of DCs through the JAK2-STAT3 pathway.
Not available
S-EPMC11682348
|
biostudies-literature
Cite
A new species of Pseudaulacaspis MacGillivray, 1921 from China (Hemiptera, Coccoidea, Diaspididae) with a key to Chinese species.
Not available
S-EPMC3406451
|
biostudies-literature
Cite
Bulk RNA sequencing of total lung cells from 14 dpi of high-dose mtb on Atg14f/f and Atg14f/f-LysM-cre mice.
Bulk RNA sequencing of total lung cells from 14 dpi of high-dose mtb on Atg14f/f and Atg14f/f-LysM-cre mice.
PRJNA1027360
|
ENA
Cite
Description of a new species of
Saissetia
from China (Hemiptera, Coccomorpha, Coccidae).
Not available
S-EPMC6205997
|
biostudies-literature
Cite
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