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MetabolomicsEffect of NAC154 transcription factor overexpression on the field grown poplar stem wood metabolome
Several xylem-associated regulatory genes have been identified that control processes associated with wood formation in poplar. Prominent among these are the NAC domain transcription factors (NACs). We evaluated the putative involvement of Populus NAC154, a co-ortholog of the Arabidopsis gene SND2, ...
2015-01-31 | MTBLS119 | MetaboLights
MetabolomicsExometabolomic profiling of bacterial strains cultivated using Arabidopsis root extract as the sole carbon source
The ability of microorganisms to use root-derived metabolites as growth substrates is a key trait for success in the rhizospheric niche. However, few studies describe which specific metabolites are consumed, or to what degree microbial strains differ in their substrate consumption patterns. Here we ...
2018-10-16 | MTBLS555 | MetaboLights
TranscriptomicsRice gene expression in irrigated and rainfed fields during two seasons
To identify the concurrent effects of multiple environmental factors on gene expression under natural climatic fluctuations in rice, we examined global gene expression patterns in two fields typical of the main modes of rice cultivation, over two seasons, each comprising 15 time-points in three diff...
ORGANISM(S): Oryza sativa 
2015-10-01 | E-GEOD-73609 | biostudies-arrayexpress
ProteomicsThe Q Exactive HF, a Benchtop Mass Spectrometer with a Pre-filter, High Performance Quadrupole and an Ultra-High Field Orbitrap Analyzer
The quadrupole Orbitrap mass spectrometer (Q Exactive) has made a powerful proteomics instrument available in a benchtop format. It significantly boosted analyzable proteins per hour and has now evolved into a proteomics analysis workhorse for many laboratories. Here we describe the Q Exactive Plus ...
ORGANISM(S): Homo sapiens (Human) 
2014-11-10 | PXD001203 | Pride
Segmented quadrupole Q exactive hf Orbitrap ultra-high field Q exactive plus Quadrupole pre-filter Shotgun proteomics 
UnknownECG Triggering in Ultra-High Field Cardiovascular MRI.
Not available
S-EPMC6024401 | biostudies-literature
TranscriptomicsTranscriptomic response of Huanglongbing infected Citrus sinensis following field application of a microbial fermentation product
Huanglongbing (HLB) is considered the most destructive disease in Citrus production and threatens the future of the industry. Microbial derived defence elicitors have gained recognition for their role in plant defence priming. A transcriptomic assessment using GeneChip microarray of the hour 6 sampl...
ORGANISM(S): Citrus sinensis 
2021-11-15 | E-MTAB-10919 | biostudies-arrayexpress
ProteomicsDefining the molecular impacts of Humalite application on field-grown wheat (Triticum aestivum L.) using quantitative proteomics
Increasing global food production demands have resulted in increased fertilizer usage, causing detrimental environmental impacts. Biostimulants, such as humic substances, are currently being applied as a strategy to increase plant nutrient-use efficiency and minimize environmental impacts within cro...
ORGANISM(S): Triticum aestivum (Wheat) 
2025-07-28 | PXD058950 | Pride
Humalite Proteomics Wheat 
TranscriptomicsTranscription profiling of Drosophila exposed to a levitation magnet for different lengths of time
Drosophila samples were exposed to the levitation magnet inside a 25mm diameter tubes with 3 ml of yeast-based Drosophila food in the bottom and a chamber of only 5 mm of height over the food. This small region is needed in order to guarantee that all the flies were located in the effective g area s...
ORGANISM(S): Drosophila melanogaster 
2010-07-01 | E-MEXP-2082 | biostudies-arrayexpress
TranscriptomicsTranscriptomic profiling permits the identification of pollutant sources and effects in ambient water samples
The delta smelt (Hypomesus transpacificus) is a pelagic fish species endemic to the Sacramento-San Joaquin Estuary in Northern California, listed as endangered under both the USA Federal and Californian State Endangered Species Acts and acts as an indicator of ecosystem health in its habitat range. ...
ORGANISM(S): Hypomesus transpacificus 
2012-09-20 | E-GEOD-40991 | biostudies-arrayexpress
ProteomicsDemo datasets for AutoCCS: Automated collision cross section calculation software for ion mobility spectrometry-mass spectrometry
Agilent Tunemix samples analyzed on three IMS-MS platforms with nitrogen gas: 1) stepped-field drift tube IMS-MS, 2) single-field drift tube IMS-MS, and 3) SLIM-based IMS-MS. Also, tetraalkylammonium (TAA) salt samples analyzed with SLIM-based IMS-MS using helium gas.
ORGANISM(S): Unclassified Sequences (ncbitaxon:12908) 
2020-08-19 | MSV000085979 | MassIVE
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