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ProteomicsProtein interactome of small RNA fragments: identification and functional implications
Populations of small eukaryotic RNAs, in addition to relatively well recognized molecules (such as miRNAs or siRNAs), also contain fragments derived from all classes of constitutively expressed non-coding RNAs. It has been recently demonstrated that the formation and accumulation of RNA fragments (R...
ORGANISM(S): Homo sapiens (Human) 
2018-10-24 | PXD010075 | Pride
Protein interactome Rna fragments Rna-protein interaction 
TranscriptomicsBarely leaf dark-induced senescence
Time-course transcriptional profiling of senescing barley leaves. In this model, the senescence process was induced by continued incubation of the seedlings in darkness. Plant samples for the expression analysis were collected before senescence induction (Day 0) and after 3,7 and 10 days of incubati...
ORGANISM(S): Hordeum vulgare 
2014-10-22 | E-GEOD-62539 | biostudies-arrayexpress
TranscriptomicsA gene expression microarray for Nicotiana benthamiana based on de novo transcriptome sequence assembly
Gene expression microarray was designed, based on two recently published versions of the N. benthamiana transcriptome (v.3 and v.5). Based on homology searches and hybridization tests we identified the sense strand in 106,684 transcriptome contigs and used this information to design a Nb-105k microa...
ORGANISM(S): Nicotiana benthamiana 
2016-01-08 | E-GEOD-76631 | biostudies-arrayexpress
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