Firefly - OmicsDI

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Unknown (873)
Genomics (140)
Transcriptomics (106)
Proteomics (19)
Methylation profiling (3)
Other (3)
Metabolomics (3)
Clinical (1)

Organisms

Homo sapiens (55)
Mus musculus (47)
Archaea (17)
Bacteria (17)
Betaherpesvirinae (17)
Borrelia (17)
Botrytis cinerea (17)
Candida albicans (17)
Clostridium perfringens (17)
Cnidaria (17)
Eukaryota (17)
Fasciola (17)
Fungi (17)
Hepatitis B virus (17)
Human betaherpesvirus 5 (17)
Influenza C virus (17)
Japanese encephalitis virus group (17)
Miscanthus x giganteus (17)
Arabidopsis thaliana (5)
Drosophila melanogaster (2)
Oryza sativa (1)
Rattus norvegicus (1)
Photinus pyralis (1)
Escherichia coli str. K-12 substr. MG1655 (1)
Streptococcus pneumoniae (1)
synthetic construct (1)
Escherichia coli (1)
Caenorhabditis elegans (1)
502593 (1)
Lamprigera yunnana (1)

Organisms

Homo sapiens (38)
Mus musculus (23)
Photinus pyralis (5)
Nipponoluciola cruciata (5)
Drosophila melanogaster (3)
Vargula hilgendorfii (2)
Pyrocoelia pectoralis (2)
Aquatica leii (2)
Photinus corruscus (1)
Luciola kagiana (1)
Photuris sp. 2014_Photuris3 (1)
Ignelater luminosus (1)
Sclerotia aquatilis (1)
Abscondita terminalis (1)
Lamprigera yunnana (1)
Leishmania guyanensis (1)
Pristolycus diversecostatus (1)
Luciola parvula (1)
Trypanosoma brucei brucei (1)
Aquatica lateralis (1)
Influenza A virus (A/Puerto Rico/8/1934(H1N1)) (1)
Lampyris noctiluca (1)
Neurospora crassa (1)
Xenopus laevis (1)
Mesocricetus auratus (1)
Streptococcus pneumoniae (1)
Caenorhabditis elegans (1)
Mus musculus domesticus (1)
synthetic construct (1)

Repository

ENA (136)
biostudies-arrayexpress (86)
geo (29)
pride (17)
MetaboLights (3)
iProX (2)
NODE (2)

Tissue

Cell culture (3)
Cell suspension culture (3)
Liver (2)
Brain (2)
Ciliated cell (1)
Hepatocyte (1)
Midgut (1)
Plant cell (1)
Sperm (1)
Spinal cord (1)

Disease

Cataract (1)
Neoplasms (1)
Amyotrophic lateral sclerosis (1)
Disease free (1)

Technology Type

Mass Spectrometry (17)
Data-dependent acquisition (5)
Bottom-up proteomics (4)
Mass spectrometry (3)
HDMSE (3)
Top-down proteomics (3)
Shotgun proteomics (2)
Affinity purification coupled with mass spectrometry proteomics (1)
Chemical cross-linking coupled with mass spectrometry proteomics (1)
Gel-based experiment (1)
Mass spectrometry imaging (1)

Instrument Platform

Illumina HiSeq 1500 (2)
Illumina HiSeq 2500 (2)
Illumina NovaSeq 6000 (2)
Illumina HiSeq 4000 (1)
Liquid Chromatography Tandem MS (LC-MS/MS) (1)
Exactive (Thermo Scientific) (1)
Liquid Chromatography MS - positive - reverse phase (1)
Liquid Chromatography MS - negative - reverse phase (1)

Publication Date

2013 (16)
2010 (14)
2014 (13)
2012 (11)
2022 (8)
2023 (7)
2011 (7)
2008 (7)
2025 (7)
2016 (6)
2024 (6)
2019 (5)
2017 (5)
2015 (5)
2009 (5)
2026 (3)
2020 (3)
2018 (3)
2007 (2)
2006 (1)
2021 (1)

CHEBI ID

CHEBI:134221 (1)
CHEBI:25078 (1)
CHEBI:81693 (1)
CHEBI:63283 (1)
CHEBI:134224 (1)
CHEBI:134223 (1)
CHEBI:20096 (1)
CHEBI:42191 (1)
CHEBI:1547 (1)
CHEBI:73025 (1)
CHEBI:27570 (1)
CHEBI:18186 (1)
CHEBI:70744 (1)
CHEBI:27592 (1)
CHEBI:16750 (1)
CHEBI:24898 (1)
CHEBI:25017 (1)
CHEBI:28044 (1)
CHEBI:16393 (1)
CHEBI:16347 (1)
CHEBI:27897 (1)
CHEBI:17596 (1)

Metabolite Name

Dipropylated lucibufagin isomer 3 (1)
Dipropylated lucibufagin isomer 2 (1)
Dipropylated lucibufagin isomer 1 (1)
Monoacetylated, mono propylated lucibufagin isomer 3 (1)
Monoacetylated, mono propylated lucibufagin isomer 2 (1)
Monoacetylated, mono propylated lucibufagin isomer 1 (1)
Diacetylated lucibufagin isomer 2 (1)
Diacetylated lucibufagin isomer 1 (1)
Monoacetylated lucibufagin isomer 6 (1)
Monoacetylated lucibufagin isomer 5 (1)
Monoacetylated lucibufagin isomer 4 (1)
Monoacetylated lucibufagin isomer 3 (1)
Monoacetylated lucibufagin isomer 2 (1)
Core lucibufagin isomer 3 (1)
Monoacetylated lucibufagin isomer 1 (1)
Core lucibufagin isomer 2 (1)
Core lucibufagin isomer 1 (1)
Sphingosine-phosphate? (split peak?) (1)
No KEGG hit - C12H22N4O5 (1)
DDTDP plasticizer (1)
No KEGG hit (1)
EDTA? (1)
Large, unknown, no KEGG hit (1)
No KEGG hit - C6H11NO7 (1)
Sphingosine-phosphate? (1)
No KEGG hit - C13H17N3O5 (1)
No KEGG hit - C15H22N2O4 (1)
No KEGG hit - C13H17N3O4 (1)
No KEGG hit - C11H21N3O4 (1)
No KEGG hit - C5H4O4 (1)

First Public Date

2014 (18)
2025 (14)
2026 (13)
2024 (13)
2022 (12)
2023 (11)
2021 (11)
2020 (10)
2019 (9)
2018 (8)
2017 (6)
2016 (4)
2015 (4)
2013 (3)

Classification

protozoa (2)
viruses (1)
bacteria (1)

Study status

Not provided (1)

Study type

Transcription profiling by array (55)
RNA-seq of coding RNA (7)
RNAi profiling by array (4)
Transcription profiling by RT-PCR (4)
Other (3)
Unknown experiment type (2)
Transcription profiling by tiling array (2)
ChIP-seq (2)
ChIP-chip by tiling array (1)
Comparative genomic hybridization by array (1)
MicroRNA profiling by array (1)
Methylation profiling by high throughput sequencing (1)
RNA-seq of total RNA (1)
RNA-seq of non coding RNA (1)
Interventional (1)

Release Date

2022 (86)
2023 (65)
2020 (64)
2024 (61)
2016 (59)
2018 (59)
2014 (55)
2025 (55)
2010 (53)
2019 (50)
2021 (49)
2013 (44)
2017 (43)
2012 (39)
2015 (36)
2011 (36)
2008 (29)
2009 (26)
2006 (14)
2007 (10)
2026 (9)
2001 (7)
2002 (4)
2004 (3)
2005 (1)
2000 (1)
1993 (1)

Lab affiliation

Protein Biogenesis Lab, The Francis Crick Institute, 1 Midland Road, London, NW1 1AT (4)
1. Department of Biochemistry and Microbiology, University of Victoria, Victoria, British Columbia, Canada; 2. University of Victoria Genome BC Proteomics Centre, University of Victoria, Victoria, British Columbia, Canada; 3. Gerald Bronfman Department of Oncology, Jewish General Hospital, Montreal, Quebec, Canada; 4. Segal Cancer Proteomics Centre, Lady Davis Institute, Jewish General Hospital, McGill University, Montreal, Quebec, Canada (1)
Department of Chemistry, Lomonosov Moscow State University, Leninskye Gory 1, 119991 Moscow, Russia (1)
Institute of Zoology, University of Cologne, Zuelpicher Strasse 47b, 50674 Cologne, Germany (1)
MRC Toxicology Unit, University of Cambridge (1)
Max Planck Institute of Biochemistry Department of Cellular Biochemistry Am Klopferspitz 18 82152 Martinsried, Germany (1)
Protein Biogenesis Lab, The Francis Crick Institute, London, NW1 1AT (1)
Research Service (R&D22) VA Portland Health Care System 3710 SW US Veterans Hospital Rd. Portland, OR 97239 USA (1)
School of Biosciences, University of Birmingham, UK (1)
Université Paris Cité, CNRS, Institut Jacques Monod, 15 rue Hélène Brion, F-75013 Paris, France (1)
University of Naples Federico II (1)
University of Wisconsin - Madison, Plant Pathology Department. (1)
Whitehead Institute for Biomedical Research (1)
ZBS6, Proteomics and Spectroscopy, Robert Koch-Institute (1)

Location

Brazil (1)

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Molecular characterization of firefly nuptial gifts: a multi-omics approach sheds light on postcopulatory sexual selection

Postcopulatory sexual selection is recognized as a key driver of reproductive trait evolution, including the machinery required to produce endogenous nuptial gifts. Despite the importance of such gifts, the molecular composition of the non-gametic components of male ejaculates and their interactions...

2016-12-22 | MTBLS362 | MetaboLights

Firefly genomes illuminate parallel origins of bioluminescence in beetles

Fireflies and their luminous courtships have inspired centuries of scientific study. Today firefly luciferase is widely used in biotechnology, but the evolutionary origin of bioluminescence within beetles remains unclear. To shed light on this long-standing question, we sequenced the genomes of two ...

2018-09-14 | MTBLS698 | MetaboLights

Global metabolomics of fireflies (Coleoptera: Lampyridae) explore metabolic adaptation to fresh water in insects

Aquatic insects are well-adapted to freshwater environments, but metabolic mechanisms of such adaptations, particularly to primary environmental factors (e.g., hypoxia, water pressure, dark light and abundant microbes), are poorly known. Most firefly species (Coleoptera: Lampyridae) are terrestri...

2022-10-03 | MTBLS4987 | MetaboLights

Illuminating Firefly Diversity: Trends, Threats and Conservation Strategies.

Not available

S-EPMC10815995 | biostudies-literature

Long-read sequence assembly of the firefly Pyrocoelia pectoralis genome.

Not available

S-EPMC5751067 | biostudies-literature

Evaluating firefly extinction risk: Initial red list assessments for North America.

Not available

S-EPMC8598072 | biostudies-literature

Sperm Competition and Paternity in the Endangered Firefly Pyrocoelia pectoralis (Coleoptera: Lampyridae: Lampyrinae).

Not available