Fix T T - OmicsDI

Show results for

Unknown (404)
Transcriptomics (82)
Proteomics (63)
Genomics (26)
Models (1)
Metabolomics (1)

Organisms

Homo sapiens (50)
Mus musculus (26)
Drosophila melanogaster (20)
Escherichia coli (11)
Arabidopsis thaliana (9)
Rhizobium leguminosarum (6)
Drosophila virilis (3)
Medicago truncatula (3)
Geobacter sulfurreducens (2)
Zea mays (2)
Saccharomyces cerevisiae (2)
Rattus norvegicus (2)
Plasmodium berghei ANKA (2)
Alternaria brassicicola (1)
Rhodopseudomonas palustris (1)
Rhizobium etli CFN 42 (1)
Thalassiosira pseudonana (1)
Salmonella enterica (1)
Xenopus laevis (1)
Salmonella enterica subsp. enterica serovar Typhimurium (1)
Candidatus Thioglobus autotrophicus (1)
Bacteria (1)
Candidatus Electronema (1)
Candidatus Thiodiazotropha sp. (1)
Capsaspora owczarzaki (1)
Chromobacterium violaceum (1)
Chromobacterium violaceum ATCC 12472 (1)
JC polyomavirus (1)
Lucinoma kazani (1)
Moorella thermoacetica ATCC 39073 (1)

Organisms

Mus musculus (4)
Homo sapiens (2)
Macaca nemestrina (1)
Thalassiosira pseudonana (1)
Candidatus Thioglobus autotrophicus (1)
Salmonella enterica subsp. enterica serovar Typhimurium (1)
Zea mays (1)
Arabidopsis thaliana (1)

Repository

biostudies-arrayexpress (89)
pride (63)
ENA (14)
geo (5)
BioModels (1)
MetaboLights (1)

Tissue

Cell culture (8)
Plant cell (4)
Brain (3)
Leaf (3)
Urine (3)
Blood cell (2)
Blood serum (2)
Embryonic stem cell (2)
Epithelial cell (2)
Fibroblast (2)
Skin (2)
Astroglial cell (1)
Blood (1)
Brain macroglial cell (1)
Carotid atherosclerotic plaque (1)
Endothelial cell of umbilical vein (1)
Epithelial cell of lung (1)
Extracellular vesicle (1)
Gastrocnemius (1)
Gill (1)
Heart (1)
Keratinocyte (1)
Liver (1)
Lung (1)
Lung adenocarcinoma cell (1)
Obsolete lymphoblast (1)
Permanent cell line cell (1)
Photosynthetic cell (1)
Root (1)
Root nodule (1)

Disease

Normal (4)
Osteosarcoma (2)
Malaria (2)
Mature T-cell and NK-cell lymphoma (1)
Lymphoma (1)
B-cell lymphoma (1)
Alzheimer's disease (1)
Atherosclerosis (1)
Calcium oxalate nephrolithiasis (1)
Disease free (1)
Lung adenocarcinoma (1)
Progressive multifocal leukoencephalopathy (1)
Rheumatoid arthritis (1)
Schistosomiasis (1)

Technology Type

Mass Spectrometry (63)
Shotgun proteomics (39)
Bottom-up proteomics (12)
Data-dependent acquisition (5)
Data-independent acquisition (5)
Gel-based experiment (4)
SWATH MS (4)
Chemical cross-linking coupled with mass spectrometry proteomics (2)
Mass spectrometry (1)
Affinity purification coupled with mass spectrometry proteomics (1)
HDMSE (1)
Metaproteomics (1)
Top-down proteomics (1)

Instrument Platform

Illumina NovaSeq 6000 (11)
ScanArray Express HT [PerkinElmer] (4)
Linux server, HPC cluster (3)
Thermal cycler (Bio-Rad C1000), Agilent 2100 Bioanalyzer, Qubit 4 Fluorometer (3)
Benchtop centrifuge, vortex, NanoDrop or plate reader (for RiboGreen assay), TapeStation (Agilent) (3)
Liquid nitrogen freezer, surgical instruments (3)
NextSeq 550 (3)
Not applicable in this study (2)
NextSeq 500 (2)
Illumina Genome Analyzer IIx (1)
Axon- GenePix4000B (1)
418 [Affymetrix] (1)
Illumina NovaSeq X Plus (1)
Illumina HiSeq 2500 (1)
Illumina HiSeq 2000 (1)
Gas Chromatography MS - (1)

Publication Date

2026 (13)
2008 (12)
2025 (11)
2015 (11)
2022 (10)
2012 (10)
2023 (9)
2024 (8)
2014 (8)
2021 (7)
2010 (7)
2013 (6)
2020 (6)
2018 (6)
2019 (5)
2017 (5)
2016 (5)
2009 (5)
2004 (5)
2011 (3)
2006 (3)
2005 (3)
2007 (1)

UNIPROT ID/AC

O14543 (1)
O60674 (1)
P20963 (1)
P24394 (1)
P29350 (1)
P29597 (1)
P35225 (1)
P42229 (1)
P51692 (1)
P78552 (1)
Q14627 (1)

CHEBI ID

CHEBI:33699 (1)
CHEBI:12936 (1)
CHEBI:15366 (1)
CHEBI:15428 (1)
CHEBI:15603 (1)
CHEBI:15756 (1)
CHEBI:15824 (1)
CHEBI:16000 (1)
CHEBI:16024 (1)
CHEBI:16414 (1)
CHEBI:16551 (1)
CHEBI:16857 (1)
CHEBI:16865 (1)
CHEBI:16977 (1)
CHEBI:16995 (1)
CHEBI:17203 (1)
CHEBI:17268 (1)
CHEBI:17306 (1)
CHEBI:17327 (1)
CHEBI:17351 (1)
CHEBI:17634 (1)
CHEBI:17754 (1)
CHEBI:17992 (1)
CHEBI:189078 (1)
CHEBI:189079 (1)
CHEBI:189080 (1)
CHEBI:22470 (1)
CHEBI:24406 (1)
CHEBI:24684 (1)
CHEBI:26250 (1)

Metabolite Name

ALA (1)
Acetate (1)
Alpha-tocopherol (1)
Arachidic acid (1)
Benzoic acid (1)
D-Fructose (1)
D-Galactose (1)
D-Glucose (1)
D-Lactic acid (1)
D-Mannose (1)
D-Trehalose (1)
Dibenzoxepine (1)
Dihydroquinazoline (1)
Docosanoic acid (1)
Ergostene (1)
Ethanolamine (1)
GABA (1)
Glycerol (1)
Glyceryl glycoside (1)
Glycine (1)
Hexadecanedioic acid (1)
Hydroxybutyric acid (1)
L-Alanine (1)
L-Leucine (1)
L-Proline (1)
L-Threonine (1)
L-Valine (1)
Linoleic acid (1)
Maltose (1)
Myo-inositol (1)

First Public Date

2014 (4)
2023 (2)
2015 (2)
2025 (1)
2024 (1)
2021 (1)
2020 (1)
2019 (1)
2016 (1)

Modelling Approach

Ordinary differential equation model (1)

Lab affiliation

Institute of Integrative Biology of the Cell (I2BC), CEA, CNRS, Université Paris-Sud, Bâtiment 23A, 1 avenue de la Terrasse, F-91198 Gif-sur-Yvette cedex, France. (5)
Department of Biology, University of Fribourg Chemin du Musée 10, 1700 Fribourg, Switzerland T +41 26 300 8631 (3)
Department of Microbiology and Immunology, The Peter Doherty Institute for Infection and Immunity, The University of Melbourne, 792 Elizabeth Street, Melbourne, VIC 3000, Australia. (3)
Génétique Quantitative et Évolution - Le Moulon INRA - Univ. Paris Sud - CNRS - AgroParisTech Ferme du Moulon 91190 Gif-sur-Yvette, France (3)
Université Paris-Saclay, INRAE, Univ Paris-Sud, CNRS, AgroParisTech, GQE - Le Moulon, 91190, Gif-sur-Yvette, France (3)
Department of Microbiology and Molecular Medicine, CMU, University of Geneva, Geneva, Switzerland (2)
University of Modena and Reggio Emilia (2)
Bio-X Institutes, Key Laboratory for the Genetics of Development and Neuropsychiatric Disorders (Ministry of Education), Shanghai Key Laboratory of Psychotic Disorders, and Brain Science and Technology Research Center, Shanghai Jiao Tong University, 800 Dongchuan Road, Shanghai 200240, China. (1)
Biozentrum der LMU München Pflanzenwissenschaften Großhaderner Str. 2-4 82152 Planegg-Martinsried (1)
CEDOC, NMS, Lisbon, Portugal (1)
CNRS (1)
Center for Excellence in Molecular Cell Science, CAS (1)
Center for Genomic Regulation, Universitat Pompeu Fabra, 08003 Barcelona, Spain (1)
Center for Microbial Communities Department of Chemistry and Bioscience Aalborg University (1)
Center of Excellence in Systems Biology, Research affairs, Faculty of Medicine, Chulalongkorn University (1)
Departamento de Biologia Celular e Molecular e Bioagentes Patogenicos (1)
Department of Biological Engineering, Koch Institute of Integrative Cancer Research, Massachusetts Institute of Technology, Cambridge, MA, USA (lab head) (1)
Department of Cell and Molecular Biology, College of Medicine, Chang Gung University, Taoyuan, Taiwan (1)
Department of Genetics, Cell- and Immunobiology, Semmelweis University, Budapest, Hungary MTA-SE Immune-Proteogenomics Extracellular Vesicle Research Group, Budapest, Hungary HCEMM-SE Extracellular Vesicles Research Group, Budapest, Hungary (1)
Department of Life Science,National Taiwan University, Taipei, Taiwan (1)
Department of Molecular Sciences, Macquarie University, Australia (1)
Department of Molecular and Cellular Biology, Faculty of Sciences, University of Geneva, 30 quai Ernest Ansermet, Geneva, Switzerland (1)
Division of Life Science, The Hong Kong University of Science and Technology (1)
ETH Zurich, Institute of Molecular Health Sciences, Zurich, Switzerland (1)
ETH Zürich (1)
Hydrosystems and bioprocesses unit research (HBAN), Environmental Technologies Department, Irstea, France (1)
I2BC, CNRS, Gif/Yvette France (1)
I2BC, CNRS, Gif/Yvette, France (1)
INRAE, UMR408 Sécurité et Qualité des Produits d'Origine Végétale (1)
Institute of Integrative Biology of the Cell (I2BC), CEA, CNRS, Université Paris-Sud, Avenue de la Terrasse, F-91198 Gif-sur-Yvette cedex, France (1)

IsPrivate

False (1)

Classification

bacteria (1)

Modification

+3amu) (4)
4-tetrahydrothiazine-3-carboxylic acid (1)
4x(15)N labeled L-arginine (1)

Study type

Transcription profiling by array (35)
RNA-seq of coding RNA (13)
ChIP-seq (9)
ChIP-chip by array (8)
Other (6)
CUT&RUN (4)
RNA-seq of coding RNA from single cells (3)
RNAi profiling by array (2)
ATAC-seq (2)
DNA-seq (2)
Methylation profiling by array (2)
Unknown experiment type (1)
Capture-C (1)
RNA-seq of total RNA (1)

Release Date

2021 (53)
2024 (44)
2023 (42)
2022 (42)
2019 (33)
2025 (31)
2020 (30)
2014 (25)
2017 (24)
2015 (24)
2018 (18)
2012 (17)
2008 (16)
2016 (14)
2013 (14)
2010 (13)
2026 (12)
2011 (10)
2005 (7)
2004 (7)
2009 (6)
2006 (4)
2007 (3)
2001 (2)
1999 (1)
1998 (1)

Previous page
1 / 58
You're on page 1
page 2
page 3
page 4
page 5
page ...
page 58
Next page

Sort by:

Relevance

Page size

Immune Gene Expression Profile of Conventional and Regulatory T cells

Understanding human regulatory T cells (Tregs) heterogeneity may identify markers of disease pathogenesis and facilitate the development of optimized cellular therapeutics. To better elucidate human Treg subsets, we conducted direct transcriptional profiling of CD4+FOXP3+Helios+ thymic-derived Treg ...

ORGANISM(S): Homo sapiens

2015-04-30 | E-GEOD-61834 | biostudies-arrayexpress

Regulatory T cell dysfunction in type 1 diabetes: what's broken and how can we fix it?

Not available

S-EPMC6448885 | biostudies-literature

A validated gene regulatory network and GWAS identifies early regulators of T-cell associated diseases (ChIP-Seq)

For the purpose of the Gene Regulatory Network validation we have performed chromatin-immunoprecipitation sequencing (ChIP-Seq) experiment for three transcription factors; namely GATA3, MAF and MYB. ChIP-Seq of GATA3, MAF and MYB in human naÃ¯ve CD4+ T-cells differentiated toward Th1 and Th2 until d...

ORGANISM(S): Homo sapiens

2015-11-12 | E-GEOD-72266 | biostudies-arrayexpress

Integration-deficient lentiviral vectors expressing codon-optimized R338L human FIX restore normal hemostasis in Hemophilia B mice.

Not available

S-EPMC3944325 | biostudies-literature

Multimodal mechanisms of pathogenic variants in the signal peptide of FIX leading to hemophilia B.

Not available

S-EPMC11321298 | biostudies-literature

Complete genome sequence of Kosakonia sacchari type strain SP1(T.).

Not available

S-EPMC4149035 | biostudies-literature

Development of iPSC-derived FIX-secreting hepatocyte sheet as a novel treatment tool for hemophilia B treatment.