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Unknown
(150)
Genomics
(83)
Transcriptomics
(20)
Proteomics
(7)
Metabolomics
(5)
Other
(4)
Organisms
activated sludge metagenome
(5)
mixed sample
(3)
Vibrio cholerae
(3)
Oncorhynchus mykiss
(3)
Etheostoma caeruleum
(2)
Nitrosomonas europaea ATCC 19718
(2)
Eohaustorius estuarius
(1)
Acinetobacter oleivorans DR1
(1)
Oncorhynchus tshawytscha
(1)
Carassius auratus
(1)
Viruses
(1)
Pimephales promelas
(1)
Pleuronichthys verticalis
(1)
Salmonella enterica subsp. enterica serovar Typhimurium
(1)
Escherichia coli str. K-12 substr. MG1655
(1)
anaerobic digester metagenome
(1)
unidentified wastewater sludge bacterial sample S1
(1)
cellular organisms
(1)
Proteus phage Privateer
(1)
Andropogon gerardi
(1)
Bacteria
(1)
Canis lupus familiaris
(1)
Chromatiales bacterium OalgGamma1
(1)
Clavibacter nebraskensis NCPPB 2581
(1)
Cnidaria
(1)
Ensifer adhaerens
(1)
Fasciola
(1)
Human alphaherpesvirus 1 strain 17
(1)
Human alphaherpesvirus 1 strain KOS
(1)
Human betaherpesvirus 5
(1)
Organisms
activated sludge metagenome
(5)
bioreactor metagenome
(3)
sludge metagenome
(2)
bioreactor sludge metagenome
(2)
uncultured anaerobic ammonium-oxidizing bacterium
(1)
uncultured archaeon
(1)
Neisseria gonorrhoeae
(1)
wastewater metagenome
(1)
biofilm metagenome
(1)
marine metagenome
(1)
Repository
ENA
(78)
biostudies-arrayexpress
(25)
MetaboLights
(5)
MassIVE
(4)
geo
(3)
iProX
(2)
jPOST
(1)
pride
(1)
Technology Type
Mass spectrometry
(3)
Mass spectrometry assay
(2)
Mass Spectrometry
(1)
Shotgun proteomics
(1)
Instrument Platform
Illumina MiSeq
(4)
Complete Genomics
(2)
Q Exactive
(2)
Liquid Chromatography MS - positive - reverse-phase
(2)
Liquid Chromatography MS - negative - reverse-phase
(2)
NextSeq 500
(1)
6546 Q-TOF (Agilent Technologies)
(1)
LTQ Orbitrap Velos Pro (Thermo Scientific)
(1)
Revident Q-TOF (Agilent Technologies)
(1)
Liquid Chromatography MS - Negative (LC-MS (Negative))
(1)
Liquid Chromatography MS - Positive (LC-MS (Positive))
(1)
5975C Series GC/MSD (Agilent)
(1)
Liquid Chromatography MS - positive - reverse phase
(1)
Liquid Chromatography MS - negative - reverse phase
(1)
Publication Date
2025
(6)
2014
(6)
2024
(4)
2012
(4)
2023
(3)
2019
(3)
2021
(2)
2016
(2)
2015
(2)
2013
(2)
2022
(1)
2011
(1)
2010
(1)
2008
(1)
2020
(1)
2026
(1)
2018
(1)
CHEBI ID
CHEBI:32365
(1)
CHEBI:17822
(1)
CHEBI:26271
(1)
CHEBI:18186
(1)
CHEBI:17234
(1)
CHEBI:25017
(1)
CHEBI:15428
(1)
CHEBI:17148
(1)
CHEBI:15741
(1)
CHEBI:17268
(1)
CHEBI:6650
(1)
CHEBI:28044
(1)
CHEBI:16335
(1)
CHEBI:27266
(1)
CHEBI:17306
(1)
CHEBI:78320
(1)
CHEBI:15756
(1)
Metabolite Name
Uridine
(3)
Vignatic acid B
(2)
4-(2-((7-Amino-2-(furan-2-yl)-[1,2,4]triazolo[1,5-a][1,3,5]triazin-5-yl)amino)ethyl)phenol
(2)
Asn-Arg-Ala-Ile
(2)
Ergocristine
(2)
P-Toluenesulfonic acid
(2)
1-Ethoxymethyl-5-fluorouracil
(2)
2-[1-[2-[(4-Carbamimidoylbenzoyl)amino]-3-(4-hydroxyphenyl)propanoyl]piperidin-4-yl]oxyacetic acid
(2)
Dhesn
(2)
Vignatic acid A
(2)
Methyl (2S)-2-[[4-[[(2R)-2-amino-3-sulfanylpropyl]amino]-2-phenylbenzoyl]amino]-4-methylsulfanylbutanoate
(2)
Glycyl-prolyl-glutamic acid
(2)
Lys-Cys-Thr-Cys-Cys-Ala
(2)
[[(3R,4R,5S,6R)-3-Acetamido-4,5-dihydroxy-6-(hydroxymethyl)oxan-2-yl]amino] N-phenylcarbamate
(2)
(3b,20R,22R)-3,20,27-Trihydroxy-1-oxowitha-5,24-dienolide 3-glucoside
(2)
Cinncassiol D1 glucoside
(2)
Adenosine 3'-monophosphate
(2)
Pro-Pro-Phe
(2)
Taurodehydrocholic acid
(2)
Capsianoside V
(2)
3-hydroxyoctanoyl carnitine
(2)
Morellin
(2)
Glycerophospho-N-Arachidonoyl Ethanolamine
(2)
3-Hydroxy-4-aminopyridine
(2)
N-Acetyl-L-methionine
(2)
Diethylpropion
(2)
4-Hydroxyphenylpyruvic acid
(2)
Muramic acid
(2)
Trigonelline
(2)
Terephthalic Acid
(2)
First Public Date
2026
(15)
2024
(12)
2025
(9)
2023
(9)
2021
(7)
2022
(5)
2020
(5)
2019
(5)
2018
(3)
2014
(3)
2017
(2)
2016
(1)
2015
(1)
2013
(1)
Classification
bacteria
(1)
Study type
Transcription profiling by array
(13)
DNA-seq
(3)
Comparative genomic hybridization by array
(2)
Other
(2)
ChIP-seq
(2)
RNA-seq of coding RNA
(2)
High-throughput sequencing
(1)
Release Date
2023
(21)
2022
(18)
2024
(16)
2021
(16)
2025
(15)
2020
(14)
2014
(11)
2019
(10)
2017
(10)
2015
(9)
2016
(7)
2013
(5)
2018
(5)
2012
(4)
2010
(3)
2011
(2)
2008
(2)
2009
(2)
2000
(2)
2026
(1)
2007
(1)
2001
(1)
Lab affiliation
The University of Queensland, Advanced Water Management Centre (AWMC), QLD 4072, Australia
(1)
Tags
wastewater
(1)
pathogen
(1)
pathogen:bacterium
(1)
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Biofilm vs. sludge flocs
Biofilm vs. sludge flocs Genome sequencing
PRJNA820345
|
ENA
Cite
Juan de Fuca FLOCS
Juan de Fuca FLOCS Targeted loci environmental
PRJNA472057
|
ENA
Cite
Persistent reshaping of cohesive sediment towards stable flocs by turbulence.
Not available
S-EPMC9889388
|
biostudies-literature
Cite
Biofilm and flocs
PRJNA1096990
|
ENA
Cite
Characterization of Flocs and Floc Size Distributions Using Image Analysis.
Not available
S-EPMC4752185
|
biostudies-literature
Cite
Multi-omics research on common allergens during the ripening of pollen and poplar flocs of
Populus deltoides
.
Not available
S-EPMC10313134
|
biostudies-literature
Cite
Long-lasting organics removal via •OH adsorbed transition metal flocs: Electron transfer-mediated H-bond and van der Waals force.
Not available
S-EPMC11406266
|
biostudies-literature
Cite
Bulk sludge flocs in Aerobic MBRs
Bulk sludge flocs in Aerobic MBRs Raw sequence reads
PRJNA1314972
|
ENA
Cite
Community structure of thermophilic photosynthetic microbial mats and flocs at Sembawang Hot Spring, Singapore.
Not available
S-EPMC10313338
|
biostudies-literature
Cite
A structure-function based approach to floc hierarchy and evidence for the non-fractal nature of natural sediment flocs.
Not available
S-EPMC8263784
|
biostudies-literature
Cite
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