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TranscriptomicsTranscription start site identification in Bacillus subtilis
Cappable-seq was used to map transcription start sites globally in wild type Bacillus subtilis. Total RNA was isolated from cells grown in LB media until exponential phase. RNA corresponding to transcription start sites was capped with a 5' biotin tag, which was used for enrichment via a pull down w...
ORGANISM(S): Bacillus subtilis subsp. subtilis str. 168 
2021-04-16 | E-MTAB-8582 | biostudies-arrayexpress
UnknownReassessment of Rebleeding Risk of Forrest IB (Oozing) Peptic Ulcer Bleeding in a Large International Randomized Trial.
Not available
S-EPMC5612665 | biostudies-literature
TranscriptomicsDifferent xenogeneic silencing strategies in Escherichia coli and Bacillus subtilis are dictated by RNA polymerase promiscuity
Cappable-seq was used to map transcription start sites globally in B. subtilis and E. coli to investigate spurious transcription, and how B. subtilis prevents it.
ORGANISM(S): Bacillus subtilis subsp. subtilis str. 168 
2022-01-12 | E-MTAB-10777 | biostudies-arrayexpress
TranscriptomicsCarD links DNA supercoiling to gene regulation in Rhodobacter sphaeroides
Sequencing datasets produced during the investigation into the function of the CarD transcription factor in Rhodobacter sphaeroides. Sequencing datasets and in vitro biochemical assay reveal CarD is dependant on negative DNA supercoiling for activation of transcription. In this experiment, 4 sets ...
ORGANISM(S): Cereibacter sphaeroides 
2025-10-16 | E-MTAB-15087 | biostudies-arrayexpress
UnknownEvidence for sequenced molecular evolution of IDH1 mutant glioblastoma from a distinct cell of origin.
Not available
S-EPMC3236649 | biostudies-literature
UnknownModern slavery and the race to fish.
Not available
S-EPMC6220235 | biostudies-literature
UnknownDevelopment of caecaloids to study host-pathogen interactions: new insights into immunoregulatory functions of Trichuris muris extracellular vesicles in the caecum.
Not available
S-EPMC7435689 | biostudies-literature
TranscriptomicsDirect genesis of functional rodent and human Schwann cells from skin mesenchymal precursors (human)
Recent reports of directed reprogramming have raised questions about the stability of cell lineages. Here, we have addressed this issue, focusing upon skin-derived precursors (SKPs), a dermally-derived precursor cell. We show by lineage tracing that murine SKPs from dorsal skin originate from mese...
ORGANISM(S): Homo sapiens 
2014-08-01 | E-GEOD-57518 | biostudies-arrayexpress
UnknownUsing an Antibiogram Profile to Improve Infection Control and Rational Antimicrobial Therapy in an Urban Hospital in The Gambia, Strategies and Lessons for Low- and Middle-Income Countries.
Not available
S-EPMC10135392 | biostudies-literature
Transcriptomics3C-seq analysis of Acinetobacter baumannii AB5075 in the presence and absence of H-NS-39
The experiment contains 3C-seq data for Acinetobacter baumannii strain AB5075 with different genetic alterations. The strain was grown at 37 degrees in LB medium and nucleoprotein was cross-linked using formaldehyde. Genomic DNA was isolated and digested with NlaIII before being ligated with T4 liga...
ORGANISM(S): Acinetobacter baumannii 
2024-07-15 | E-MTAB-13800 | biostudies-arrayexpress
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