Fotakis A A - OmicsDI

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Unknown (57)
Proteomics (19)

Organisms

Schizophyllum commune H4-8 (15)
Mycobacterium tuberculosis SP7 (15)
Oryza sativa Japonica Group (15)
Crotalus durissus terrificus (15)
Eriocheir sinensis (15)
Candidatus Endoriftia persephonae (15)
Mycobacterium tuberculosis SP10 (15)
Mycobacterium tuberculosis SP13 (15)
Cotesia typhae (15)
Mycobacterium tuberculosis SP22 (15)
Cepaea nemoralis (15)
Enterobacter ludwigii (15)
Corynebacterium diphtheriae bv. mitis str. ISS 3319 (15)
Olea europaea (15)
Chlamydomonas reinhardtii (15)
Lama (15)
Planorbella pilsbryi (15)
Wolbachia sp. wMelPop (15)
Pyricularia oryzae P131 (15)
Enterococcus mundtii CRL35 (15)
Pongo pygmaeus (15)
Oncorhynchus tshawytscha (15)
Pseudomonas canadensis (15)
Strongylocentrotus purpuratus (15)
Influenza A virus (A/California/04/2009(H1N1)) (15)
Salmonella enterica subsp. enterica serovar Typhimurium (15)
Homo (15)
Bradyrhizobium diazoefficiens (15)
Streptococcus pyogenes STAB901 (15)
Pseudomonas aeruginosa PAO1H2O (15)

Repository

pride (15)
MassIVE (4)

Tissue

Dental plaque (8)
Colon (4)
Bone (3)
Cell culture (3)
Eggshell (1)
Dentin (1)
Tooth enamel (1)
Bone marrow (1)

Disease

Colon cancer (4)

Technology Type

Mass Spectrometry (15)
Shotgun proteomics (13)
SWATH MS (2)

Instrument Platform

Q Exactive (4)
LTQ Orbitrap Elite (2)
LTQ Orbitrap Velos (1)

Publication Date

2015 (5)
2023 (4)
2016 (3)
2017 (2)
2018 (2)
2022 (1)
2020 (1)
2019 (1)

Release Date

2022 (9)
2023 (8)
2020 (8)
2025 (6)
2018 (5)
2017 (5)
2024 (4)
2021 (4)
2019 (4)
2016 (2)
2014 (2)

Lab affiliation

BioArCh, University of York, UK (5)
1) Department of Biology, Institute of Molecular Systems Biology, ETH Zurich, Switzerland 2) Faculty of Science, University of Zurich, Zurich, Switzerland (4)
Section for Evolutionary Genomics, Globe Insitute, University of Copenhagen (1)
The Globe Institue, University of Copenhagen (1)
Lundbeck Foundation GeoGenetics Centre, Natural History Museum of Denmark, University of Copenhagen, Denmark (1)
Jesper Velgaard Olsen, PhD Vice Director, Professor Novo Nordisk Foundation Center for Protein Research Proteomics Program University of Copenhagen Faculty of Health and Medical Sciences (1)
Department of Biological Sciences, Graduate School of Science, the Uni- versity of Tokyo, 7–3–1 Hongo, Bunkyo-ku, Tokyo 113–0033, Japan. (1)
BioArCh, Department of Archaeology, University of York (1)

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Multi-omic detection of Mycobacterium leprae in archaeological human dental calculus

Mineralised dental plaque (calculus) has proven to be an excellent source of ancient biomolecules. In this study we present a Mycobacterium leprae genome (6.6-fold), the causative agent of leprosy, recovered via shotgun sequencing of 16th century human dental calculus from an individual from Trondhe...

ORGANISM(S): Homo sapiens (Human)

2020-10-19 | PXD017836 | Pride

Dental calculus Palaeoproteomics

apoE3[K146N/R147W] acts as a dominant negative apoE form that prevents remnant clearance and inhibits the biogenesis of HDL.

Not available

S-EPMC4076092 | biostudies-literature

Direct evidence of milk consumption from ancient human dental calculus, central Europe

This study investigated the consumption of milk products in the archaeological record, utilizing human dental calculus as a reservoir of dietary proteins from archaeological samples from across Eurasia. Protein extraction and generation of tryptic peptides from dental calculus was performed using a ...

ORGANISM(S): Homo Sapiens (ncbitaxon:9606)

2017-03-29 | MSV000080765 | MassIVE

Leishmaniasis in Greece: Prospects of transitioning to a One Health surveillance system.

Not available

S-EPMC11440306 | biostudies-literature

Chemical control and insecticide resistance status of sand fly vectors worldwide.

Not available

S-EPMC8360369 | biostudies-literature

Biomimetic surface structuring using cylindrical vector femtosecond laser beams.

Not available

S-EPMC5361190 | biostudies-literature

Maternal Dietary Protein Patterns and Neonatal Anthropometrics: A Prospective Study with Insights from NMR Metabolomics in Amniotic Fluid.