Franch R R - OmicsDI

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Unknown (173)
Metabolomics (4)
Genomics (3)
Transcriptomics (2)
Proteomics (2)

Organisms

Brachyspiraceae (2)
Lentinus crinitus (2)
unclassified Marseilleviridae (2)
Trichoderma reesei RUT C-30 (2)
Chlorella sp. SAG 211-18 (2)
Paenibacillus sp. (2)
Phytophthora capsici LT1534 (2)
Saccharum hybrid cultivar (2)
Methanococcus maripaludis (2)
Synechocystis salina LEGE 06099 (2)
Ligula intestinalis (2)
Abramis brama (2)
Ascaris suum (2)
Ammoxenus amphalodes (2)
Halobacterium salinarum NRC-1 (2)
Edwardsiella piscicida (2)
Pseudomonas phage phiKZ (2)
Trionyx triunguis (2)
fungal yeast sp. S26-10 (2)
Pseudomonas phage LUZ19 (2)
synthetic construct (2)
Pseudomonas aeruginosa PAO1-VE2 (2)
Necator americanus (2)
Human adenovirus 5 (2)
Trypanosoma (2)
Leuconostoc lactis (2)
Clarias gariepinus (2)
Hantaan virus 76-118 (2)
Bos taurus (1)
Coptis chinensis (1)

Organisms

Coptis chinensis (1)
Homo sapiens (1)

Repository

MetaboLights (4)
ENA (3)
pride (2)
biostudies-arrayexpress (1)
geo (1)

Tissue

Thymocyte (1)
Stomach (1)
Thymus (1)

Disease

Stomach disease (1)

Technology Type

Mass spectrometry (2)
Mass spectrometry assay (2)
Mass Spectrometry (2)
Shotgun proteomics (2)

Instrument Platform

Liquid Chromatography MS - negative - reverse phase (3)
Liquid Chromatography MS - positive - reverse phase (3)
Liquid Chromatography MS - positive - reverse-phase (1)
Liquid Chromatography MS - negative - reverse-phase (1)

Publication Date

2025 (3)
2022 (2)
2014 (1)
2026 (1)
2019 (1)

CHEBI ID

CHEBI:175372 (1)
CHEBI:186675 (1)
CHEBI:4838 (1)
CHEBI:165758 (1)
CHEBI:187087 (1)
CHEBI:84782 (1)
CHEBI:187672 (1)
CHEBI:69019 (1)
CHEBI:187405 (1)
CHEBI:174488 (1)
CHEBI:175360 (1)
CHEBI:189817 (1)
CHEBI:174997 (1)
CHEBI:186803 (1)
CHEBI:190778 (1)
CHEBI:187429 (1)
CHEBI:187233 (1)
CHEBI:190902 (1)
CHEBI:191977 (1)
CHEBI:165798 (1)
CHEBI:53769 (1)
CHEBI:188956 (1)
CHEBI:187720 (1)
CHEBI:175622 (1)
CHEBI:188400 (1)
CHEBI:187236 (1)
CHEBI:187376 (1)
CHEBI:189803 (1)
CHEBI:174618 (1)
CHEBI:186796 (1)

Metabolite Name

6-(2-Hydroxyethyl)-5,6-dihydrosanguinarine (3)
3-(3-hydroxyphenyl)-2-phenyl-4-[(E)-2-phenylethenyl]-2,3-dihydro-1-benzofuran-6-ol (3)
6-Acetylmorphine (3)
Methyl reserpate (3)
3-Nitrotyrosine (3)
2-Dodecylbenzenesulfonic acid (3)
5-Methoxytryptophan (3)
4-Hydroxycinnamic acid (3)
Dodecyl gallate (3)
Medicagenic acid (3)
Mannitol (3)
2,3-Dinor-TXB2 (3)
Sebacic acid (3)
2-Hydroxycinnamic acid (3)
Citrulline (3)
Thymidine (3)
(3beta,17alpha,23S)-17,23-Epoxy-3,29-dihydroxy-27-norlanosta-7,9(11)-diene-15,24-dione (2)
Naptalam (2)
Picrasin A (2)
Petasitenine (2)
Quadrone (2)
5-(7,7-Dimethyl-7H-furo[2,3-f]chromen-2-yl)-4,6-bis-(3-methyl-but-2-enyl)-benzene-1,3-diol (2)
Deoxysappanone B 7,3'-dimethyl ether (2)
({1-[2-(2,4-dihydroxyphenyl)-5,7-dihydroxy-6-(3-methylbut-2-en-1-yl)-4-oxo-3,4-dihydro-2H-1-benzopyran-3-yl]-3,7-dimethylocta-2,6-dien-4-yl}oxy)sulfonic acid (2)
Abu-Phe-OH (2)
(1S,4aS,7S,7aR)-7-methyl-1-[(2S,3R,4S,5R,6R)-3,4,5-triacetoxy-6-(acetoxymethyl)tetrahydropyran-2-yl]oxy-1,4a,5,6,7,7a-hexahydrocyclopenta[c]pyran-4-carboxylic acid (2)
2-O-alpha-mannosyl-D-glycerate (2)
2-(3,4-dihydroxyphenyl)ethyl (5Z)-4-[2-[2-(3,4-dihydroxyphenyl)ethoxy]-2-oxoethyl]-5-[2-[(E)-3-phenylprop-2-enoyl]oxyethylidene]-6-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-4H-pyran-3-carboxylate (2)
({8-[2-(2,4-dihydroxyphenyl)-5,7-dihydroxy-6-(3-methylbut-2-en-1-yl)-4-oxo-3,4-dihydro-2H-1-benzopyran-3-yl]-2,6-dimethylocta-2,6-dien-4-yl}oxy)sulfonic acid (2)
Cis-Dihomoaconitic acid (2)

First Public Date

2025 (2)
2022 (1)

Modification

6x(2)H labeled dimethylated L-arginine (1)

Study type

Transcription profiling by array (1)

Release Date

2022 (32)
2023 (28)
2021 (26)
2025 (23)
2024 (14)
2017 (10)
2020 (8)
2018 (7)
2019 (6)
2015 (6)
2014 (4)
2016 (3)
2026 (2)
2013 (2)
2010 (1)
2007 (1)
2006 (1)

Lab affiliation

School of Pharmacy, Lanzhou University, Lanzhou, China (1)
Estructura de Macromoléculas (CNB-CSIC) (1)

Tags

xref:PubMed:40604479 (1)

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The impact of Coptis chinensis Franch root rot on leaves

Root rot disease poses a devastating threat to Coptis chinensis Franch, a medicinal plant prized for its bioactive alkaloids. To dissect its defense mechanisms, we conducted integrated transcriptomic and metabolomic analyses on resistant (R), early-stage infected (S-ES), and late-stage infected (S-L...

ORGANISM(S): Coptis chinensis

2025-03-25 | GSE290673 | GEO

The impact of Coptis chinensis Franch root rot on leaves

PRJNA1229509 | ENA

Combined de novo transcriptomic and physiological analyses reveal RyALS3-mediated aluminum tolerance in Rhododendron yunnanense Franch.

Not available

S-EPMC9399778 | biostudies-literature

Complete plastid genome of Primula calliantha Franch. (Primulaceae): an alpine ornamental plant endemic to Hengduan Mountain, China.

Not available

S-EPMC8366611 | biostudies-literature

Nomenclatural and taxonomic notes on Rubusdavidianus Kuntze and R.viburnifolius Franch.

Not available