Fried I I - OmicsDI

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Unknown (406)
Transcriptomics (23)
Proteomics (13)
Metabolomics (6)
Genomics (4)
Other (1)

Organisms

Homo sapiens (15)
Mus musculus (9)
Escherichia coli (9)
Rattus norvegicus (2)
Glycine max (1)
Sus scrofa (1)
Haloferax volcanii DS2 (1)

Organisms

Mus musculus (1)

Repository

biostudies-arrayexpress (24)
pride (12)
MetaboLights (5)
EGA (2)
MassIVE (2)
GNPS (1)
ENA (1)

Tissue

Cell culture (2)
Adipocyte (1)
Cerebrospinal fluid secreting cell (1)

Disease

Disease free (1)
Hydrocephalus (1)
Schizophrenia (1)

Technology Type

Mass Spectrometry (12)
Bottom-up proteomics (6)
Mass spectrometry assay (4)
Data-dependent acquisition (4)
Shotgun proteomics (4)
Chemical cross-linking coupled with mass spectrometry proteomics (3)
ILLUMINA, Illumina HiSeq 2000 (ILLUMINA), Illumina HiSeq 2000 (1)
Illumina HiSeq 2000 (1)
Mass spectrometry (1)
Data-independent acquisition (1)

Instrument Platform

Liquid Chromatography MS - negative - reverse-phase (3)
Liquid Chromatography MS - positive - reverse-phase (3)
TimsTOF Pro (2)
Illumina HiSeq 2500 (1)
Illumina HiSeq 2000 (1)
Orbitrap Fusion (1)
Liquid Chromatography MS - alternating - reverse-phase (1)
Liquid Chromatography MS - negative - reverse phase (1)
Liquid Chromatography MS - positive - reverse phase (1)

Publication Date

2025 (6)
2004 (5)
2026 (5)
2022 (4)
2023 (4)
2015 (3)
2012 (3)
2013 (2)
2011 (2)
2008 (2)
2024 (2)
2018 (1)
2016 (1)
2014 (1)
2010 (1)
2009 (1)
2007 (1)

Metabolite Name

((2-Amino-3-((2-amino-3-((carboxymethyl)amino)-3-oxopropyl)dithio)propanoyl)amino)acetic acid (1)
(+)-2,3-Dihydro-3-methyl-1H-pyrrole (1)
(+)-Acutifolin A (1)
(+)-Erythraline (1)
(+)-Serradiol (1)
(+/-)-(E)-Ethyl-2-[(E)-hydroxyimino]-5-nitro-3-hexeneamide (1)
(+/-)-2,8-Epithio-cis-p-menthane (1)
(-)-Epigallocatechin sulfate (1)
(1-(5-Fluoropentyl)-1H-indol-3-yl)(4-methylnaphthalen-1-yl)methanone (1)
(13Z)-3-Hydroxyicos-13-enoylcarnitine (1)
(17E,19E,21E,23E,25E)-4,6,8,10,12,14,16,27-Octahydroxy-3-(1-hydroxyhexyl)-17,28-dimethyl-1-oxacyclooctacosa-17,19,21,23,25-pentaen-2-one (1)
(1R,2R)-3-oxo-2-pentyl-cyclopentanehexanoic acid (1)
(1S-Endo)-5-(4-Chloro-3-methylphenyl)-1-((4-methylphenyl)methyl)-N-(1,3,3-trimethylbicyclo(2.2.1)hept-2-yl)-1H-pyrazole-3-carboxamide (1)
(1alpha,3beta,20S,22R,24S,25S)-Pubescenin (1)
(2-Methoxyethyl)benzene (1)
(20R)-Ginsenoside Rh2 (1)
(22E)-26,26,26,27,27,27-hexafluoro-25-hydroxy-22,23-didehydrovitamin D3 / (22E)-26,26,26,27,27,27-hexafluoro-25-hydroxy-22,23-didehydrocholecalciferol (1)
(23S,24S)-17,23-Epoxy-24,29-dihydroxy-27-norlanost-8-ene-3,15-dione (1)
(2E)-2-ethylidene-4-hydroxy-5-methyl-3(2H)-furanone (1)
(2R,3S)-Piscidic acid (1)
(2R,4S)-4-Carbamimidamido-3-acetamido-2-((1R,2R)-2-hydroxy-1-methoxy-3-(octanoyloxy)propyl)-3,4-dihydro-2H-pyran-6-carboxylic acid (1)
(2R,6x)-7-Methyl-3-methylene-1,2,6,7-octanetetrol 2-glucoside (1)
(2S)-2-[[(2S)-2-[[(2S)-2-Amino-5-(diaminomethylideneamino)pentanoyl]amino]-5-(diaminomethylideneamino)pentanoyl]amino]-5-(diaminomethylideneamino)pentanoic acid (1)
(2S,3'S)-alpha-Amino-2-carboxy-5-oxo-1-pyrrolidinebutanoic acid (1)
(2S,3R)-2-(4-{2-[(3S,4S)-3,4-Dimethylpyrrolidin-1-YL]ethoxy}phenyl)-3-(4-hydroxyphenyl)-2,3-dihydro-1,4-benzoxathiin-6-OL (1)
(3'-sulfo)Galbeta-Cer(d18:0/20:0(2OH)) (1)
(3R,7R)-1,3,7-Octanetriol (1)
(3R-(3alpha,4alpha(2R*,3R*),5beta,6beta))-5-Methoxy-4-(2-methyl-3-(3-methyl-2-butenyl)oxiranyl)-1-oxaspiro(2.5)octan-6-ol carbamate (1)
(3S,5R,6R,7E)-3,5,6-Trihydroxy-7-megastigmen-9-one (1)
(3b,16a,21b,22a)-12-Oleanene-3,16,21,23,28-pentol-22-angeloyloxy-23-al (1)

First Public Date

2025 (1)

Study type

Transcription profiling by array (20)
MicroRNA profiling by high throughput sequencing (1)
ChIP-seq (1)
RNA-seq of coding RNA (1)
RNA-seq of non coding RNA (1)

Release Date

2023 (57)
2022 (54)
2025 (47)
2021 (35)
2020 (35)
2024 (26)
2019 (25)
2018 (21)
2016 (20)
2015 (16)
2012 (15)
2017 (14)
2014 (11)
2013 (11)
2011 (8)
2010 (7)
2026 (7)
2008 (6)
2009 (5)
2004 (5)
2007 (3)
2002 (1)
2001 (1)

Lab affiliation

Assistant Professor, Department of Chemistry Assistant Professor, Department of Biology (by courtesy) Assistant Professor, Thomas C. Jenkins Department of Biophysics (by courtesy) Preceptor, Chemistry-Biology Interface (CBI) Program (1)
Assistant Professor, Department of Chemistry Assistant Professor, Thomas C. Jenkins Department of Biophysics (by courtesy) (1)
Department of Biology, Johns Hopkins University, USA (1)
Department of Chemistry, Johns Hopkins University (1)
Department of Chemistry, T.C. Jenkins Department of Biophysics, Department of Biology, Johns Hopkins University (1)
Department of Neurosurgery and Institute for NeurosciencesUniversity Hospital of Toulouse, Toulouse, France. Toulouse NeuroImaging Center (ToNIC), University of Toulouse, INSERM, UPS, Toulouse, France. (1)
Florence and Herbert Irving Endowed Professor of Medicine Columbia University Irving Medical Center (1)
Johns Hopkins University, Chemistry (1)
Johns Hopkins University, Chemistry Department, Fried Lab, USA (1)
Johns Hopkins University, Chemistry Department, Fried Lab, USA (lab head) (1)
Johns Hopkins University, Department of Chemistry, Johns Hopkins University, Baltimore, MD 21218, USA, Thomas C. Jenkins Department of Biophysics, Johns Hopkins University, Baltimore, MD 21218, USA (1)
Proteomics Core Facility and Research Group Proteomics, CEITEC-MU, Masaryk University, Brno, Czech (1)

Tags

xref:PubMed:39828137 (1)

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A Proteome-Wide Map of Chaperone-Assisted Protein Refolding in a Cytosol-like Milieu

The journey by which proteins navigate their energy landscapes to their native structures is complex, involving (and sometimes requiring) many cellular factors and processes operating in partnership with a given polypeptide chain’s intrinsic energy landscape. The cytosolic environment and its compl...

ORGANISM(S): Escherichia coli

2022-11-23 | PXD030869 | Pride

Comparative Studies on the Physicochemical and Volatile Flavour Properties of Traditional Deep Fried and Circulating-Air Fried Hairtail (Trichiurus lepturus).

Not available

S-EPMC9455639 | biostudies-literature

In vitro glycemic index, antioxidant capacity and some physicochemical characteristics of deep-fried sorghum based gluten free chips.

Not available

S-EPMC8357898 | biostudies-literature

Evaluation of vacuum impregnation as a novel approach for soaking of fried Gulabjamun balls.

Not available

S-EPMC6525694 | biostudies-literature

Study on Volatile Profiles, Polycyclic Aromatic Hydrocarbons, and Acrylamide Formed in Welsh Onion (Allium fistulosum L.) Fried in Vegetable Oils at Different Temperatures.

Not available

S-EPMC9100245 | biostudies-literature

Ribavirin Treated Huh7.5.1 Cells

The combination of peginterferon and ribavirin is the standard treatment for chronic hepatitis C. Our recent clinical study suggests that ribavirin augments the induction of interferon stimulated genes (ISGs) in patients treated for HCV infection [1]. In order to further characterize the mechanism...

ORGANISM(S): Homo sapiens

2012-01-01 | E-GEOD-23031 | biostudies-arrayexpress

High-sensitivity cardiac troponin I and frailty: associations with the frailty index and Fried phenotype in older women.

Not available

S-EPMC12815600 | biostudies-literature

CD45+/Col I+ Fibrocytes: Major Source of Collagen in the Fibrotic Lung, but not in Fibroblast Cultures

PRJNA1081374 | ENA

Determination of benzo(a)pyrene in fried and baked foods by HPLC combined with vesicular coacervative supramolecular solvent extraction.

Not available

S-EPMC6342809 | biostudies-literature

A Severe Gastroenteritis Outbreak of Salmonella enterica Serovar Enteritidis Linked to Contaminated Egg Fried Rice, China, 2021.

Not available