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TranscriptomicsMolecular dissection of drought tolerance mechanisms in rice by comparative deep transcriptome sequencing
To dissect the molecular mechanisms underlying drought tolerance (DT) in rice, transcriptome differences of a DT introgression line H471, the DT donor P28 and the drought sensitive recurrent parent HHZ under drought stress were investigated using deep transcriptome sequencing. Results revealed a dif...
ORGANISM(S): Oryza sativa 
2014-12-30 | E-GEOD-57950 | biostudies-arrayexpress
TranscriptomicsGenome-wide Gene Expression Profiling of Salinity Responsiveness in Rice
Abiotic stresses such as salinity are very important factors limiting rice growth and productivity around the world. Affymetrix rice genome array containing 48,564 japonica and 1,260 indica sequences was used to analyze the gene expression pattern of rice responsive to salinity stress, try to elucid...
ORGANISM(S): Oryza sativa 
2015-11-02 | E-GEOD-58603 | biostudies-arrayexpress
TranscriptomicsComparative transcriptome profiling of chilling stress responsiveness in two contrasting rice genotypes
Rice is sensitive to chilling stress, especially at the seedling stage. To elucidate the molecular genetic mechanisms of chilling tolerance in rice, comprehensive gene expressions of two rice genotypes (chilling-tolerant LTH and chilling-sensitive IR29) with contrasting responses to chilling stress ...
ORGANISM(S): Oryza sativa 
2012-12-21 | E-GEOD-38023 | biostudies-arrayexpress
TranscriptomicsGenome-wide temporal-spatial gene expression profiling of drought responsiveness in rice
Rice is highly sensitive to drought, and the effect of drought may vary with the different genotypes and development stages. Genome-wide gene expression profiling was used as the initial point to dissect molecular genetic mechanism of this complex trait and provide valuable information for the impro...
ORGANISM(S): Oryza sativa 
2010-12-23 | E-GEOD-26280 | biostudies-arrayexpress
TranscriptomicsTissue-specific transcriptomic profiling of Sorghum propinquum using a rice genome array
Sorghum (Sorghum bicolor) is one of the world's most important cereal crops. S. propinquum is a perennial wild relative of S. bicolor with well-developed rhizomes. Functional genomics analysis of S. propinquum, especially with respect to molecular mechanisms related to rhizome growth and development...
ORGANISM(S): Sorghum propinquum 
2013-03-31 | E-GEOD-40380 | biostudies-arrayexpress
TranscriptomicsDeep transcriptome sequencing of rhizome and shoot in Sorghum propinquum
Our study provides the first comprehensive insight into the comparative transcriptome between shoot and rhizome in sorghum propinquum. Using the deep RNA sequencing technique, more than 70% of genes were identified to be expressed. Comparative analysis revealed that a strong difference in gene expre...
ORGANISM(S): Sorghum propinquum 
2013-12-31 | E-GEOD-43999 | biostudies-arrayexpress
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