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MetabolomicsInsights into Metabolic Changes Caused by the Trichoderma virens-Maize Root Interaction
The interactions of crops with root-colonizing endophytic microorganisms are highly relevant to agriculture, because endophytes can modify plant resistance to pests and increase crop yields. We investigated the interactions between the host plant Zea mays and the endophytic fungus Trichode...
2021-07-08 | MTBLS1964 | MetaboLights
TranscriptomicsSimultaneous RNA-Seq Analysis of a Mixed Transcriptome of Rice and Blast Fungus Interaction
To understand the plant-pathogen interaction comprehensively, it is valuable to monitor the gene expression profiles of both interacting organisms simultaneously in the same infected plant tissue. Using RNA-Seq, we analyzed the mixed transcriptome of rice and blast fungus in infected leaves at 24 ho...
ORGANISM(S): Oryza sativa Japonica Group 
2012-12-14 | E-MTAB-4287 | biostudies-arrayexpress
TranscriptomicsTranscriptome and Metabolite Profiling of the Infection Cycle of Zymoseptoria tritici on Wheat Reveals a Biphasic Interaction with Plant Immunity Involving Differential Pathogen Chromosomal Contributions and a Variation on the Hemibiotrophic Lifestyle Definition.
The hemibiotrophic fungus Zymoseptoria tritici causes Septoria tritici blotch disease of wheat (Triticum aestivum). Pathogen reproduction on wheat occurs without cell penetration, suggesting that dynamic and intimate intercellular communication occurs between fungus and plant throughout the disease ...
ORGANISM(S): Triticum aestivum 
2015-03-12 | E-MTAB-4116 | biostudies-arrayexpress
TranscriptomicsHost-specific transcriptomic pattern of Trichoderma virens during interaction with maize or tomato roots
To test the hypothesis that gene expression by the fungal partner in this beneficial interaction is modulated by the plant host, Trichoderma virens was co-cultured with maize or tomato in a hydroponic system allowing interaction with the roots. The transcriptomes for T. virens alone were compared wi...
ORGANISM(S): Trichoderma virens 
2014-12-19 | E-GEOD-64344 | biostudies-arrayexpress
TranscriptomicsInteraction transcriptome of host wheat and hemibiotrophic fungal pathogen Septoria tritici during disease transition Transcriptome or Gene expression
To gain comprehensive information on the molecular and physiological bases during particular stages of the interaction between wheat and S. tritici, we explored the complexity of transcriptional reprogramming of both host and pathogen at three time points (day 4, 10 and 13) by RNA-Seq analysis. The ...
ORGANISM(S): Triticum aestivum 
2013-05-30 | E-MTAB-4470 | biostudies-arrayexpress
TranscriptomicsNext Generation Sequencing identifies O2-responsive genes in the human pathogenic fungus Aspergillus fumigatus
Low oxygen conditions are not only common to natural environments but also occur during tissue invasive growth in the human host. Only few cellular factors have been identified up to now that allow the fungus to efficiently adapt its energy metabolism to the lack of O2. In the present study, we cult...
ORGANISM(S): Aspergillus fumigatus 
2014-07-25 | E-GEOD-55943 | biostudies-arrayexpress
TranscriptomicsMaize gene expression during infection with Colletotrichum graminicola
The hemibiotrophic fungal pathogen Colletotrichum graminicola is the causal agent of anthracnose disease on maize stalks and leaves. After the formation of appressoria the host cell wall is penetrated by the conversion of appressorial turgor pressure into forceful ejection of a penetration peg. Subs...
ORGANISM(S): Zea mays 
2011-08-03 | E-GEOD-31188 | biostudies-arrayexpress
MetabolomicsTowards engineering ectomycorrhization into switchgrass bioenergy crops via a lectin receptor-like kinase
Soil-borne microbes can establish compatible relationships with host plants, providing a large variety of nutritive and protective compounds in exchange for photosynthesized sugars. However, the molecular mechanisms mediating the establishment of these beneficial relationships remain unclear. Our pr...
2021-08-11 | MTBLS2597 | MetaboLights
UnknownEndoplasmic reticulum alpha-glycosidases of Candida albicans are required for N glycosylation, cell wall integrity, and normal host-fungus interaction.
Not available
S-EPMC2168260 | biostudies-literature
TranscriptomicsArabidopsis thaliana/Phytophthora parasitica compatible interaction transcriptome
Oomycetes from the genus Phytophthora are fungus-like plant pathogens that are devastating for agriculture and natural ecosystems. Due to particular physiological characteristics, no treatments against diseases caused by oomycetes are presently available. To develop such treatments, it appears essen...
ORGANISM(S): Arabidopsis thaliana 
2010-04-28 | E-GEOD-20226 | biostudies-arrayexpress
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