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GenomicsGenes affected by auxin and decapitation in moss gametophores
Genes affected by auxin and decapitation in moss gametophores
PRJNA780504 | ENA
TranscriptomicsGenes affected by auxin and decapitation in moss gametophores
The goal of this study is to identify genes whose expression is affected by decapitation and auxin in moss gametophores Project ngs2017_09_moss1-auxin in CATdb What genes are misregulated in response to decapitation or auxin response?
ORGANISM(S): Physcomitrium patens 
2022-06-21 | GSE188843 | GEO
TranscriptomicsGenome-wide transcriptome analysis during dehydration and recovery in gametophores of Physcomitrella patens
Gene transcript abundances were analyzed with samples taken from hydrated (HD), moderate dehydration (MDH), desiccated (SDH), partially recovered (PRE) and fully recovered (FRE) gametophores of P. patens by using RNA-Seq. Totally, 14686 transcripts were identified as differentially expressed transcr...
ORGANISM(S): Physcomitrium patens 
2018-02-22 | GSE66467 | GEO
GenomicsGenome-wide small RNAtranscriptome analysis during dehydration and recovery in gametophores of Physcomitrella patens
Small RNA transcript abundances were analyzed with samples taken from hydrated (HD), moderate dehydration (MDH), desiccated (SDH), partially recovered (PRE) and fully recovered (FRE) gametophores of P. patens by using next generation sequencing. Totally, 147 microRNAs were identified as differential...
ORGANISM(S): Physcomitrium patens 
2018-02-22 | GSE66589 | GEO
TranscriptomicsTranscription profiling of Physcomitrella patens response to red light treatment
Microarray transcription profiling of Physcomitrella patens dark pretreated gametophores after red light treatment.
ORGANISM(S): Physcomitrella patens 
2014-10-31 | E-MTAB-2227 | biostudies-arrayexpress
TranscriptomicsPhyscomitrella patens Reute development
Transcriptome profiling by Nimblegen array of Physcomitrella patens Reute gametophores, gametophores with gametangia, green sporophytes and brown sporophytes.
ORGANISM(S): Physcomitrella patens 
2017-05-24 | E-MTAB-4630 | biostudies-arrayexpress
TranscriptomicsPpatens transcriptome
We studied peptide generation process in moss Physcomitrella patens. For this purpose, analysis of peptidome and transcriptome of two different life forms (gametophores and protonema) and also of protoplasts were made.
ORGANISM(S): Physcomitrella patens 
2014-04-22 | E-MTAB-1637 | biostudies-arrayexpress
Methylation profilingGenome-wide DNA methylation maps during rehydration in gametophores of Physcomitrella patens.
To examine the P. patens genome-wide methylation landscape and assess its functional significance during dehydration, we generated the first single-base resolution genome methylation maps for P. patens gametophores of hydrated (HD), moderate dehydrated (MDH), severe dehydrated (SDH), partially recov...
ORGANISM(S): Physcomitrium patens 
2018-02-22 | GSE66485 | GEO
TranscriptomicsTranscription profiling of Physcomitrella patens response to fungal exudates
Physcomitrella patens gametophores were treated with exudates from the arbuscular mycorrhiza fungi (AMF) Rhizophagus irregularis (formerly known as Glomus intraradices) and Gigaspora margerita for one hour and 24 hours.
ORGANISM(S): Physcomitrella patens 
2014-11-10 | E-MTAB-3081 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of Physcomitrella patens response to UV-B
comparison of gene expression between UV-B irradiated Physcomitrella patens gametophores with their non-irradiated controls in two different UV irradiation fields.
ORGANISM(S): Physcomitrella patens 
2010-04-28 | E-MEXP-2508 | biostudies-arrayexpress
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