Gaskell Simon S

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Models (20)
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Saccharomyces cerevisiae (19)
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Tissue

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Mass spectrometry assay (1)
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Instrument Platform

Gas Chromatography MS - positive - medium polarity - Agilent 6890 GC - LECO Pegasus III TOF MS (LECO) (1)

Publication Date

2005 (20)
2012 (1)
2020 (1)

UNIPROT ID/AC

Q00764 (13)
P31688 (13)
P33401 (13)
P37012 (13)
P32861 (13)
P00549 (1)
P04806 (1)
P00560 (1)
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CHEBI ID

CHEBI:15343 (20)
CHEBI:15422 (20)
CHEBI:16908 (20)
CHEBI:15846 (20)
CHEBI:16761 (20)
CHEBI:16001 (20)
CHEBI:17794 (20)
CHEBI:17835 (20)
CHEBI:16108 (20)
CHEBI:29052 (20)
CHEBI:18021 (20)
CHEBI:15361 (20)
CHEBI:4167 (20)
CHEBI:16551 (20)
CHEBI:16027 (20)
CHEBI:17754 (20)
CHEBI:30031 (19)
CHEBI:28013 (19)
CHEBI:28602 (19)
CHEBI:17665 (19)
CHEBI:16084 (19)
CHEBI:16236 (19)
CHEBI:15978 (15)
CHEBI:46398 (13)
CHEBI:17659 (13)
CHEBI:16077 (13)
CHEBI:18066 (13)
CHEBI:18283 (13)
CHEBI:30089 (12)
CHEBI:28087 (6)

Metabolite Name

Dehydroergosterol (1)
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Galactose-6-phosphate (1)
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Myo-inositol-6-phosphate (1)
Glucose-6-phosphate|glucose-1-phosphate (1)
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Aspartic acid derivative (1)
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3-methyl 1,2-hydroxybutane (1)
4-methyl, 2-hydroxy pentanoic acid (1)
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Ammonia (1)
1,2-butandiol (1)
1,2-ethylene glycol (1)
Pyridine impurity (1)
Sulphate (1)
2-furaldehyde (1)

IsPrivate

False (20)

Modelling Approach

Ordinary differential equation model (20)

Release Date

2021 (2)
2022 (1)
2019 (1)
2012 (1)

Lab affiliation

Centre for Genomic Regulation (CRG), The Barcelona Institute of Science and Technology, Dr. Aiguader 88, Barcelona 08003, Spain (1)

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Growth control of the eukaryote cell: a systems biology study in yeast

Metabolic control analysis is being exploited in a systems biology study of the eukaryotic cell. Using chemostat culture, we have measured the impact of changes in flux (growth rate) on the transcriptome, proteome, endometabolome and exometabolome of the yeast Saccharomyces cerevisiae. Each function...

2012-04-19 | MTBLS8 | MetaboLights

Smallbone2013 - Glycolysis in S.cerevisiae - Iteration 03

Smallbone2013 - Glycolysis in S.cerevisiae - Iteration 03 This model is described in the article: A model of yeast glycolysis based on a consistent kinetic characterization of all its enzymes Kieran Smallbone, Hanan L. Messiha, Kathleen ...

2005-01-01 | MODEL1303260003 | BioModels

Smallbone2013 - Glycolysis in S.cerevisiae - Iteration 04

Smallbone2013 - Glycolysis in S.cerevisiae - Iteration 04 This model is described in the article: A model of yeast glycolysis based on a consistent kinetic characterization of all its enzymes Kieran Smallbone, Hanan L. Messiha, Kathleen ...

2005-01-01 | MODEL1303260004 | BioModels

Smallbone2013 - Glycolysis in S.cerevisiae - Iteration 00

Smallbone2013 - Glycolysis in S.cerevisiae - Iteration 00 This model is described in the article: A model of yeast glycolysis based on a consistent kinetic characterization of all its enzymes Kieran Smallbone, Hanan L. Messiha, Kathleen ...

2005-01-01 | MODEL1303260000 | BioModels

Smallbone2013 - Glycolysis in S.cerevisiae - Iteration 06

Smallbone2013 - Glycolysis in S.cerevisiae - Iteration 06 This model is described in the article: A model of yeast glycolysis based on a consistent kinetic characterization of all its enzymes Kieran Smallbone, Hanan L. Messiha, Kathleen ...

2005-01-01 | MODEL1303260006 | BioModels

Smallbone2013 - Glycolysis in S.cerevisiae - Iteration 08

Smallbone2013 - Glycolysis in S.cerevisiae - Iteration 08 This model is described in the article: A model of yeast glycolysis based on a consistent kinetic characterization of all its enzymes Kieran Smallbone, Hanan L. Messiha, Kathleen ...

2005-01-01 | MODEL1303260008 | BioModels

Smallbone2013 - Glycolysis in S.cerevisiae - Iteration 10

Smallbone2013 - Glycolysis in S.cerevisiae - Iteration 10 This model is described in the article: A model of yeast glycolysis based on a consistent kinetic characterization of all its enzymes Kieran Smallbone, Hanan L. Messiha, Kathleen ...

2005-01-01 | MODEL1303260010 | BioModels

Smallbone2013 - Glycolysis in S.cerevisiae - Iteration 11

Smallbone2013 - Glycolysis in S.cerevisiae - Iteration 11 This model is described in the article: A model of yeast glycolysis based on a consistent kinetic characterization of all its enzymes Kieran Smallbone, Hanan L. Messiha, Kathleen ...

2005-01-01 | MODEL1303260011 | BioModels

Smallbone2013 - Glycolysis in S.cerevisiae - Iteration 12

Smallbone2013 - Glycolysis in S.cerevisiae - Iteration 12 This model is described in the article: A model of yeast glycolysis based on a consistent kinetic characterization of all its enzymes Kieran Smallbone, Hanan L. Messiha, Kathleen ...

2005-01-01 | MODEL1303260012 | BioModels

Smallbone2013 - Glycolysis in S.cerevisiae - Iteration 13

Smallbone2013 - Glycolysis in S.cerevisiae - Iteration 13 This model is described in the article: A model of yeast glycolysis based on a consistent kinetic characterization of all its enzymes Kieran Smallbone, Hanan L. Messiha, Kathleen ...

2005-01-01 | MODEL1303260013 | BioModels

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