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TranscriptomicsGENCODE PCR-Seq Batch V
As part of the ENCODE consortium the GENCODE project is producing a reference gene set through manual and automated gene prediction. Selected transcript models are verified experimentally by RT-PCR amplification followed by sequencing. This is batch V, based on annotations from Gencode 6 (November20...
ORGANISM(S): Homo sapiens 
2011-08-22 | E-MTAB-737 | biostudies-arrayexpress
TranscriptomicsGENCODE PCR-Seq Batch VII
As part of the ENCODE consortium the GENCODE project is producing a reference gene set through manual and automated gene prediction. Selected transcript models are verified experimentally by RT-PCR amplification followed by sequencing. This is batch VII, which targets annotations from Gencode 8 (Mar...
ORGANISM(S): Homo sapiens 
2012-02-01 | E-MTAB-935 | biostudies-arrayexpress
TranscriptomicsGENCODE PCR-Seq Batch VI
As part of the ENCODE consortium the GENCODE project is producing a reference gene set through manual and automated gene prediction. Selected transcript models are verified experimentally by RT-PCR amplification followed by sequencing. This is batch VI, which targets annotations from Gencode 6 (Nove...
ORGANISM(S): Homo sapiens 
2011-11-25 | E-MTAB-831 | biostudies-arrayexpress
GenomicsThe GENCODE exome sequencing the complete human exome
We report the design of an extended set of targets for capturing the complete human exome, based on annotation from the GENCODE consortium. The extended set covers an addition 5,594 genes and 10.3 Mb compared to current sets which mainly target the CCDS database. The additional regions include poten...
EGAS00001000016 | EGA
TranscriptomicsGENCODE PCR-Seq Batch IV
As part of the ENCODE consortium the GENCODE project is producing a reference gene set through manual and automated gene prediction. Selected transcript models are verified experimentally by RT-PCR amplification followed by sequencing. This is batch IV, based on chromosome 3, 4 and 5 annotations fro...
ORGANISM(S): Homo sapiens 
2011-08-22 | E-MTAB-684 | biostudies-arrayexpress
TranscriptomicsGENCODE PCR-Seq Batch II
As part of the ENCODE consortium the GENCODE project is producing a reference gene set through manual and automated gene prediction. Selected transcript models are verified experimentally by RT-PCR amplification followed by sequencing. This is batch II, based on annotation from April 2009.
ORGANISM(S): Homo sapiens 
2010-11-01 | E-MTAB-407 | biostudies-arrayexpress
TranscriptomicsGENCODE PCR-Seq Batch I
As part of the ENCODE consortium the GENCODE project is producing a reference gene set through manual and automated gene prediction. Selected transcript models are verified experimentally by RT-PCR amplification followed by sequencing. This is the RNASeq part of batch I, based on annotation from Jul...
ORGANISM(S): Homo sapiens 
2011-05-01 | E-MTAB-612 | biostudies-arrayexpress
TranscriptomicsGENCODE PCR-Seq Batch IX
As part of the ENCODE consortium the GENCODE project is producing a reference gene set through manual and automated gene prediction. Selected transcript models are verified experimentally by RT-PCR amplification followed by sequencing. In batch IX, a set of de novo transcript models was tested aimin...
ORGANISM(S): Homo sapiens 
2012-10-01 | E-MTAB-1309 | biostudies-arrayexpress
TranscriptomicsGENCODE PCR-Seq Batch M1
As part of the ENCODE consortium the GENCODE project is producing a reference gene set through manual and automated gene prediction. Selected transcript models are verified experimentally by RT-PCR amplification of at least one of their unique splice junctions followed by high-throughput sequencing....
ORGANISM(S): Mus musculus 
2015-01-22 | E-MTAB-3261 | biostudies-arrayexpress
TranscriptomicsGENCODE PCR-Seq Batch X
As part of the ENCODE consortium the GENCODE project is producing a reference gene set through manual and automated gene prediction. Selected transcript models are verified experimentally by RT-PCR amplification of at least one of their unique splice junctions followed by sequencing. Batch X targets...
ORGANISM(S): Homo sapiens 
2012-10-01 | E-MTAB-1310 | biostudies-arrayexpress
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