Geng M M - OmicsDI

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Unknown (2323)
Proteomics (75)
Transcriptomics (40)
Genomics (19)
Metabolomics (13)
Models (1)
Multiomics (1)

Organisms

Homo sapiens (61)
Mus musculus (35)
Arabidopsis thaliana (6)
Caenorhabditis elegans (2)
Andrias davidianus (2)
Drosophila melanogaster (2)
Sus scrofa domesticus (2)
Triticum aestivum (2)
Zea mays (2)
Oryzias melastigma (1)
Yersinia pestis (1)
Saccharomyces cerevisiae (1)
Brucella abortus 2308 (1)
Cucumis sativus (1)
Dietzia sp. DQ12-45-1b (1)
Elaphe taeniura (1)
Populus hybrid cultivar (1)
Stutzerimonas stutzeri (1)
Bos taurus (1)
Brassica napus (1)
Capsicum annuum (1)
Chlorocebus aethiops (1)
Ctenopharyngodon idella (1)
Danio rerio (1)
Dugesia japonica (1)
Gallus gallus (1)
Glycine max (1)
Rattus norvegicus (1)
Rattus rattus (1)
Toxoplasma gondii RH (1)

Organisms

Yersinia pestis (1)

Repository

pride (57)
biostudies-arrayexpress (55)
iProX (16)
MetaboLights (13)
EGA (4)
MassIVE (2)
Cell Collective (1)
ENA (1)

Tissue

Cell culture (11)
B cell (8)
Cell suspension culture (4)
Liver (4)
Spleen (4)
Bone marrow (3)
Kidney (3)
Leaf (3)
Plant cell (3)
Blood plasma (2)
Blood serum (2)
Brain (2)
Epithelial cell (2)
Heart (2)
Pancreas (2)
Root (2)
Whole body (2)
Blood (1)
Blood cell (1)
Breast (1)
Cartilage (1)
Colon (1)
Early embryonic cell (1)
Embryo (1)
Embryonic stem cell (1)
Endothelial cell activation (1)
Extracellular exosome assembly (1)
Fibroblast (1)
Large intestine (1)
Lung (1)

Disease

Acute leukemia (8)
Lymphoma (3)
Disease free (2)
Arthritis (1)
Breast cancer (1)
Chronic kidney disease (1)
Colon cancer (1)
Melanoma (1)
Multiple myeloma (1)
Peripheral primitive neuroectodermal tumor (1)
Prostate adenocarcinoma (1)
Type 2 diabetes mellitus (1)

Technology Type

Mass Spectrometry (57)
Shotgun proteomics (33)
Mass spectrometry (13)
Bottom-up proteomics (7)
Affinity purification coupled with mass spectrometry proteomics (6)
Data-independent acquisition (5)
Data-dependent acquisition (4)
Gel-based experiment (4)
SWATH MS (2)
Illumina Genome Analyzer II, Illumina HiSeq 2000 (1)
All-ion fragmentation (1)
Chemical cross-linking coupled with mass spectrometry proteomics (1)
HDMSE (1)
SRM/MRM (1)

Instrument Platform

Q Exactive (4)
Liquid Chromatography MS - negative - reverse phase (4)
Liquid Chromatography MS - positive - reverse phase (4)
MinION (2)
NextSeq 500 (2)
API 4000 QTRAP (AB Sciex) (2)
10X Genomics Chromium Controller Instrument, Thermocycler (PCR machine), Bioanalyzer 2200 (Agilent), Qubit Fluorometer (Thermo Fisher Scientific) (1)
Biological safety cabinet, Water bath (37°C), Centrifuge, 70 µm and 35 µm cell strainers, Countstar Fluorescence Cell Analyzer (1)
Surgical scalpel (1)
BGISEQ-500 (1)
Illumina NovaSeq 6000 (1)
Agilent 5975E GC/MSD (Agilent) (1)
Gas Chromatography MS - positive (1)
Liquid Chromatography MS - NEG - HILIC (1)
Liquid Chromatography MS - Negative (LC-MS (Neg)) (1)
Liquid Chromatography MS - POS - HILIC (1)
Liquid Chromatography MS - Positive (LC-MS (Pos)) (1)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (1)
Liquid Chromatography MS - negative - hilic (1)
Liquid Chromatography Tandem MS (LC-MS/MS) (1)
Quattro micro API (Waters) (1)
TSQ Quantum XLS (Thermo Scientific) (1)
Xevo QTof MS (Waters) (1)

Publication Date

2026 (14)
2022 (13)
2013 (13)
2023 (11)
2014 (10)
2010 (10)
2024 (10)
2020 (10)
2025 (9)
2021 (9)
2015 (8)
2017 (6)
2019 (5)
2016 (4)
2012 (4)
2011 (3)
2018 (3)
2008 (1)

CHEBI ID

CHEBI:16704 (9)
CHEBI:17368 (9)
CHEBI:30769 (9)
CHEBI:16335 (8)
CHEBI:16750 (8)
CHEBI:17015 (8)
CHEBI:17596 (8)
CHEBI:17750 (8)
CHEBI:18012 (8)
CHEBI:27897 (8)
CHEBI:28044 (8)
CHEBI:15676 (7)
CHEBI:15724 (7)
CHEBI:15741 (7)
CHEBI:16040 (7)
CHEBI:16449 (7)
CHEBI:16708 (7)
CHEBI:16811 (7)
CHEBI:16914 (7)
CHEBI:17154 (7)
CHEBI:17724 (7)
CHEBI:17992 (7)
CHEBI:18186 (7)
CHEBI:18237 (7)
CHEBI:18261 (7)
CHEBI:22653 (7)
CHEBI:22660 (7)
CHEBI:25017 (7)
CHEBI:25094 (7)
CHEBI:26986 (7)

Metabolite Name

Fructose (4)
Sucrose (4)
Uridine (4)
ADP (3)
Benzoic acid (3)
Citrate (3)
Citric acid (3)
Ethanolamine (3)
Fumarate (3)
Glucose (3)
Guanosine (3)
Hypoxanthine (3)
Lactic acid (3)
N-acetylserine (3)
Pyroglutamic acid (3)
Succinate (3)
Valine (3)
Xanthosine (3)
1-lignoceroyl-GPC (24:0) (2)
1-linolenoyl-GPC (18:3)* (2)
1-linoleoyl-GPC (18:2) (2)
1-linoleoyl-GPE (18:2)* (2)
1-linoleoyl-GPI (18:2)* (2)
1-methyl-4-imidazoleacetate (2)
1-methylhistidine (2)
1-methylnicotinamide (2)
1-myristoyl-2-palmitoyl-GPC (14:0/16:0) (2)
1-oleoyl-2-linoleoyl-GPE (18:1/18:2)* (2)
1-oleoyl-GPI (18:1) (2)
1-palmitoyl-2-linoleoyl-GPC (16:0/18:2) (2)

First Public Date

2014 (1)

Classification

bacteria (1)

Study type

Transcription profiling by array (23)
ChIP-seq (11)
RNA-seq of coding RNA (8)
ChIP-chip by array (2)
Other (2)
DNA-seq (2)
Methylation profiling by array (2)
ChIP-chip by tiling array (1)
Transcription profiling by RT-PCR (1)
RNA-seq of coding RNA from single cells (1)
Methylation profiling by high throughput sequencing (1)

Release Date

2025 (364)
2022 (329)
2023 (313)
2024 (305)
2021 (230)
2020 (168)
2019 (110)
2018 (105)
2017 (79)
2015 (75)
2016 (62)
2026 (54)
2014 (50)
2013 (46)
2012 (21)
2010 (21)
2011 (18)
2008 (9)
2009 (7)
2005 (4)
2007 (2)
2004 (2)
2006 (1)
2002 (1)
2001 (1)
1998 (1)

Lab affiliation

Yale University (3)
College of Chemistry and Chemical Engineering, Hubei University, Wuhan, 430062, Hubei, P. R. China. (2)
Department of Dental Implant Center, Beijing Stomatological Hospital, School of Stomatology, Capital Medical University, Beijing, China (2)
School of Laboratory Medicine and Biotechnology, Southern Medical University (2)
State Key Laboratory Cultivation Base for Cell Differentiation Regulation, Henan Normal University, Xinxiang, Henan Province, China (2)
University of Florida (2)
Agronomy College, Henan Agricultural University, China (1)
Binzhou Medical University (1)
Biology Department University of Florida (1)
Chongqing Medical University (1)
College of Agriculture, Guizhou University, Guiyang, Guizhou, China (1)
College of Agronomy, Shandong Agricultural University, Tai’an, Shandong 271018, China (1)
Department of Biology, University of Fribourg Chemin du Musée 10, 1700 Fribourg, Switzerland T +41 26 300 8631 (1)
Department of Cell Biology, Harvard Medical School, Boston, USA (1)
Department of Joint Surgery, Xi'an Hong Hui Hospital, Xi'an Jiaotong University Health Science Center, 76 Nanguo Road, Xi'an, Shaanxi, 710054, P.R. China (1)
Department of Laboratory Medicine Department of Bioengineering and Therapeutic Sciences University of California, San Francisco (1)
Department of Laboratory Medicine, UCSF (1)
Department of Laboratory Medicine, University of California, San Francisco, USA (1)
Department of Radiation Oncology, Shanghai Proton and Heavy Ion Center, Fudan University Cancer Hospital, China (1)
Department of Systems Biology, City of Hope Comprehensive Cancer Center, CA, USA (1)
Department of Systems Biology, City of Hope Comprehensive Cancer Center, Monrovia, CA, USA (1)
Department of oncology, Mayo Clinic, Rochester, Minnesota (1)
Division of Medical Inflammation Research, Dept. Medical Biochemistry and Biophysics, Karolinska Institute, Sweden (1)
Hubei Key Laboratory of Genetic Regulation and Integrative Biology, School of Life Sciences, Central China Normal University, Wuhan, 430079, China (1)
Institute of Agricultural Equipment, Zhejiang Academy of Agricultural Sciences, Hangzhou 310021, China (1)
Institute of Animal Husbandry and Veterinary Medicine, Beijing Academy of Agriculture and Forestry Sciences, Beijing，100097, China. (1)
Institute of Cerebrovascular Diseases Research, Xuanwu Hospital of Capital Medical University, Beijing, China (1)
Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing, China (1)
Institute of Tibet Plateau Ecology, Tibet Agriculture and Animal Husbandry University, Linzhi 860000, China; The Provincial and Ministerial Co-founded Collaborative Innovation Center for R & D in Tibet Characteristic Agricultural and Animal Husbandry Resources, Linzhi 860000, China; Meat Processing Key Laboratory of Sichuan Province, School of Food and Biological Engineering, Chengdu University, Chengdu 610106, China. (1)
Keck MS & Proteomics Resource Yale School of Medicine (1)

Tags

xref:PubMed:21345178 (1)
pathogen (1)
pathogen:bacterium (1)

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Identification of Elite R-Gene Combinations against Blast Disease in Geng Rice Varieties.

Not available

S-EPMC9960461 | biostudies-literature

DNM1L depletion leads to accelerated heteroplasmy shifting of m.10191C allele through ATG7-dependent pathways.

Not available

S-EPMC13652302 | biostudies-literature

De Novo Mutation of m.3243A>G together with m.16093T>C Associated with Atypical Clinical Features in a Pedigree with MIDD Syndrome.

Not available

S-EPMC6476128 | biostudies-literature

Grass carp serum IgM LC-ESI-MS/MS and MALDI-MS

Glycosylation represents a major post-translational modification of proteins that can influence their structure and function.Telesot immunoglobulin M (IgM) is an especially important product of the immune system because it is the main Abs in seum and plays a critical role against defense infection. ...

ORGANISM(S): Ctenopharyngodon idella

2018-11-29 | PXD010308 | Pride

Effects of Grain Shape Genes Editing on Appearance Quality of Erect-Panicle Geng/Japonica Rice.

Not available

S-EPMC8355294 | biostudies-literature

Mapping annual 10-m maize cropland changes in China during 2017-2021.

Not available

S-EPMC10625519 | biostudies-literature

An amber-encoding helper phage for more efficient phage display of noncanonical amino acids.

Not available

S-EPMC10359598 | biostudies-literature

Multifaceted oncostatin M: novel roles and therapeutic potential of the oncostatin M signaling in rheumatoid arthritis.

Not available

S-EPMC10654622 | biostudies-literature

Quantitative proteomic study of total protein TMT labeling in 18 pig liver samples

Based on the work flow of quantitative proteomic analysis combined with TMT labeling and liquid chromatography-tandem mass spectrometry (LC-MS/MS), this study carried out quantitative proteomic analysis on the liver tissues of Tibetan pigs and Yorkshire pigs in Shannan (about 4000 m), Linzhi (about ...

ORGANISM(S): Sus scrofa domesticus (domestic pig)

2023-03-11 | PXD039758 | Pride

Tibetan pig liver lc-ms/ms

Genetic Dissection of Salt Tolerance and Yield Traits of Geng (japonica) Rice by Selective Subspecific Introgression.

Not available

S-EPMC10296937 | biostudies-literature

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2472 Results

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