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TranscriptomicsTranscription profiling of spinal cord from Math1-LacZ/+ and Math1-LacZ/- E12.5 mice
C57B6J mice carrying a LacZ allele at the Math1 locus (Math1-LacZ/+) were backcrossed at least 10 generations. The LacZ allele phenocopies a null allele. A total of 5 heterozygous and 5 homozygous null spinal cords were collected (staged at embryonic day 12.5) and individually processed (i.e. not ...
ORGANISM(S): Mus musculus 
2008-03-13 | E-MEXP-1492 | biostudies-arrayexpress
TranscriptomicsMethylation profiling of normal and cancerous human breast samples
To assess changes in DNA methylation state associated with breast cancer we analyzed DNA from normal and cancerous breast specimens on CpG islands microarray using methylation-sensitive enzyme McrBC for target preparation. Cy3 was used for McrBC cut sample, Cy5 was used for reference Mock sample.
ORGANISM(S): Homo sapiens 
2006-11-03 | E-MEXP-881 | biostudies-arrayexpress
TranscriptomicsMethylation profiling of normal and cancerous breast cells from human patients and cell lines in a 125 kB region of the HOXA cluster
To evaluate DNA methylation profile associated with breast cancer in 125 kB region of HOXA cluster we analyzed DNA from normal cancerous breast specimens and cell lines. Analysis was performed on the tiling array covering entire HOXA region with 500bp resolution. Immunoprecipitation with anti-methyl...
ORGANISM(S): Homo sapiens 
2006-11-03 | E-MEXP-880 | biostudies-arrayexpress
UnknownSimulated resections and responsive neurostimulator placement can optimize postoperative seizure outcomes when guided by fast ripple networks.
Not available
S-EPMC11503960 | biostudies-literature
TranscriptomicsTranscription profiling of normal and cancerous human breast cell lines and tissues to explore HOXA gene expression in context of other homological genes and in context of physical location in genome
Expression profiles of normal and cancerous cell and tissue were used for exploring HOXA genes expression in context of other homological genes (HOXB,HOXC,HOXD) and in context of physical location in genome
ORGANISM(S): Homo sapiens 
2006-11-03 | E-MEXP-882 | biostudies-arrayexpress
UnknownAnti-inflammatory mechanisms in cancer research: Characterization of a distinct M2-like macrophage model derived from the THP-1 cell line.
Not available
S-EPMC10726891 | biostudies-literature
TranscriptomicsTranscription profiling of skeletal muscles from young, old, and old calorie restricted C57BL/6NHsd mice to investigate age-related changes in the transcriptional profile
We investigated age-related changes in the transcriptional profile of skeletal muscle in 5 month old (young) and 25 month old (old) C57BL/6NHsd mice using high density oligonucleotide arrays (22,690 transcripts probed). We identified 712 transcripts that are differentially expressed in young (5 mon...
ORGANISM(S): Mus musculus 
2007-11-13 | E-GEOD-6323 | biostudies-arrayexpress
Unknownp16 protein expression and human papillomavirus status as prognostic biomarkers of nonoropharyngeal head and neck squamous cell carcinoma.
Not available
S-EPMC4251957 | biostudies-literature
TranscriptomicsMutation Order Affects Tumor Evolution and Clinical Course of Disease
Background: Cancers result from accumulation of somatic mutations and their properties are thought to reflect the sum of these mutations. However, little is known about the consequences of altering the order of mutation acquisition. Methods: Mutation order was determined in myeloproliferative neopl...
ORGANISM(S): Homo sapiens 
2014-11-17 | E-MTAB-3086 | biostudies-arrayexpress
TranscriptomicsMethylation profiling of human normal and cancer tissues to identify long range epegenetic aberations
Affymetrix Tiling Promoter arrays was used to find differentially methylated region in cancerous and norma tissue to identify long range epegenetic aberation
ORGANISM(S): Homo sapiens 
2008-08-20 | E-MEXP-1481 | biostudies-arrayexpress
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