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TranscriptomicsTranscription profiling of P. aeruginosa biofilms treated with tobramycin grown on CFBE41o- cells
We grew Pseudomonas aeruginosa biofilms on CFBE41o- human airway cells in culture, and we treated these biofilms with tobramycin. Microarray analysis was performed to gain an understanding of the global transcriptional changes that occur during antibiotic treatment. Experiment Overall Design: We co...
ORGANISM(S): Pseudomonas aeruginosa 
2008-06-18 | E-GEOD-9989 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of Pseudomonas aeruginosa treated with tobramycin
This SuperSeries is composed of the following subset Series:; GSE9989: Tobramycin Treatment of P. aeruginosa Biofilms Grown on CFBE41o- Cells; GSE9991: Tobramycin Treatment of Planktonic Pseudomonas aeruginosa Experiment Overall Design: Refer to individual Series
ORGANISM(S): Pseudomonas aeruginosa 
2008-06-18 | E-GEOD-10030 | biostudies-arrayexpress
UnknownBiomarker Panel for Chronic Graft-Versus-Host Disease.
Not available
S-EPMC5012688 | biostudies-literature
TranscriptomicsLooking for mitochondrial associated RNA
We investigated the peripheral mitochondrial localization of nuclear-encoded mRNAs (MLR) in various conditions in which translation was inhibited or the mRNA binding protein context altered (Delta puf3). We used cell fractionation protocols together with microarray to assess the distribution of mRNA...
ORGANISM(S): Saccharomyces cerevisiae 
2008-06-01 | E-GEOD-9393 | biostudies-arrayexpress
UnknownWhat Is the Best Treatment of Locally Advanced Nasopharyngeal Carcinoma? An Individual Patient Data Network Meta-Analysis.
Not available
S-EPMC5791836 | biostudies-literature
Genomicsena-DATASET-MUGQIC-22-03-2014-14:08:20:709-444 - samples
Whole exome sequencing of paediatric glioblastoma with mutations reported in the manuscript: Mutations in ACVR1, FGFR1 and TP53 associate with tumor location in histone H3 K27M pediatric midline high-grade astrocytoma
EGAD00001000792 | EGA
Genomicsena-DATASET-MUGQIC-21-03-2014-16:25:00:707-841 - samples
Exome sequencing of familial and sporadic small cell cancer of ovary cases.
EGAD00001000791 | EGA
GenomicsLocation specific ACVR1, FGFR1 and TP53 mutations in pediatric glioblastomas in conjunction with H3.3 K27M.
Recurrent somatic H3 K27M mutations characterize midline pediatric high-grade astrocytomas (pHGAs). In 40 treatment-naïve midline pHGAs we find additional somatic mutations specific to tumor location. Gain-of-function mutations in ACVR1 occur in tumors of the pons in conjunction with H3.1K27M, whil...
EGAS00001000720 | EGA
GenomicsMcGill-DKFZ Pediatric Brain Tumour Consortium
Data Access Committee EGAC00001000048
EGAC00001000048 | EGA
TranscriptomicsGenome wide methylation profliling of pediatric glioblastomas.
Genome wide DNA methylation profiling of WT, K27M, G34R and IDH1glioblastomas Bisulphite converted DNA from 38 WT, 28 K27M, 17 IDH1 AND 15 G34R samples hybridised to the Illumina 450k Human Methylation Beadchip
ORGANISM(S): Homo sapiens 
2014-03-09 | E-GEOD-55712 | biostudies-arrayexpress
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