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TranscriptomicsEffects of elevated seawater pCO2 on gene expression patterns in the gills of the green crab, Carcinus maenas
In order to promote our understanding of the responses of green crab acid-base regulatory epithelia to high pCO2, Baltic Sea green crabs were exposed to a pCO2 of 400 Pa for 3 and 7 days after which posterior gills 7 and 9 were sampled. Gills were then subsequently screened for differentially expres...
ORGANISM(S): Carcinus maenas 
2011-10-09 | E-GEOD-28870 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of gills in Atlantic salmon exposed to fresh water, salt water, iopanoic acid and T3
The aim of this experiment was to explore transcriptomic changes in the gills of Altantic salmon (Salmo salar) following a model lab based parr smolt transformation from fresh water (FW) to salt water (SW). The process of smoltification (migration from FW to SW) is stimulated by long day photoperiod...
ORGANISM(S): Salmo salar 
2015-03-19 | E-MTAB-3202 | biostudies-arrayexpress
GenomicsChIP-seq for Gata6 and histone H3K27Ac on mouse branchial arches at E11.5.
Gata6 ChIP-seq on mouse posterior branchial arches connected to outflow tract of the heart (PBA/OFT) at embryonic day (E) 11.5. H3K27Ac ChIP-seq on mouse second branchial arch (BA2) and posterior branchial arches connected to outflow tract of the heart (PBA/OFT) at embryonic day (E) 11.5.
ORGANISM(S): Mus musculus 
2017-09-25 | E-MTAB-5407 | biostudies-arrayexpress
UnknownOngoing niche differentiation under high gene flow in a polymorphic brackish water threespine stickleback (Gasterosteus aculeatus) population.
Not available
S-EPMC5800020 | biostudies-literature
TranscriptomicsCUT&RUN of histone modifications, chromatin remodelers, and transcription factors in forelimbs, hindlimbs, liver and branchial arches of E10.5 and E11.5 JAX/Swiss mouse embryos
Using CUT&RUN, we systematically measured the genome-wide binding profiles of key transcription factors and cofactors that track the activity of ontogenetically relevant signaling pathways in developing mouse tissues. This produced numerous genome-wide biding tracks for different tissues at two deve...
ORGANISM(S): Mus musculus 
2024-08-12 | E-MTAB-14340 | biostudies-arrayexpress
GenomicsChIP-seq for Prep on whole zebrafish embryos at 3.5 and 12hpf
Prep ChIP-seq on whole zebrafish embryos at 3.5 and 12 hours post fertilisation (hpf)
ORGANISM(S): Danio rerio 
2018-06-25 | E-MTAB-5967 | biostudies-arrayexpress
TranscriptomicsSublethal costs of salinity stress contribute to habitat limitation in an endangered estuarine fish
We exposed adult delta smelt to treatments of increased salinities to quantify the transcriptomic responses involved in coping with osmotic stress 70 samples were run on 70 arrays, with 1-4 replicates for each treatment or control
ORGANISM(S): Hypomesus transpacificus 
2015-12-31 | E-GEOD-72772 | biostudies-arrayexpress
TranscriptomicsLinking transcriptional responses to organismal tolerance reveals mechanisms of thermal sensitivity in a mesothermal endangered fish
We exposed adult delta smelt to varying levels of sublethal thermal stress to quantify the genes involved in their cellular stress response and identify sublethal stress thresholds Fourty-nine samples were run on fourty-nine arrays, with 3-6 replicates for each treatment or control
ORGANISM(S): Hypomesus transpacificus 
2015-08-25 | E-GEOD-67190 | biostudies-arrayexpress
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