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MetabolomicsIntegrated analysis of transcriptome and metabolome reveals molecular responses to ammonia stress in the gills of Litopenaeus vannamei under low-salinity conditions

High ammonia nitrogen stress significantly compromises the survival of Litopenaeus vannamei under low-salinity conditions, posing a common challenge in low-salinity aquaculture. However, existing studies predominantly focus on ammonia nitrogen responses unde...

2026-04-10 | MTBLS14054 | MetaboLights
TranscriptomicsEffects of elevated seawater pCO2 on gene expression patterns in the gills of the green crab, Carcinus maenas
In order to promote our understanding of the responses of green crab acid-base regulatory epithelia to high pCO2, Baltic Sea green crabs were exposed to a pCO2 of 400 Pa for 3 and 7 days after which posterior gills 7 and 9 were sampled. Gills were then subsequently screened for differentially expres...
ORGANISM(S): Carcinus maenas 
2011-10-09 | E-GEOD-28870 | biostudies-arrayexpress
TranscriptomicsEffects of hypothermia on gene expression in zebrafish gills
Ectothermic vertebrates are different from mammals that are sensitive to hypothermia and they have to maintain core temperature for survival. Why and how ectothermic animals can survive, grow and reproduce in low temperature have been for a long time a scientifically challenging and important inquir...
ORGANISM(S): Danio rerio 
2010-06-20 | E-GEOD-7853 | biostudies-arrayexpress
ProteomicsProteomic profiling of carp gills during carp edema virus infection
Carp edema virus (CEV) causes koi sleepy disease (KSD), a severe disease targeting the gills of common carp, which is associated with gills dysfunction and mortality. In this study, we employed a combination of proteomics and clinical, histopathological, physiological, and transcriptional analyses t...
ORGANISM(S): Viruses Cyprinus carpio (Common carp) 
2026-09-02 | PXD072829 | Pride
Koi sleepy disease (ksd) Innate immunity Viral gills disease Host–pathogen interactions Carp edema virus (cev) 2d-dige Gills proteomics 
TranscriptomicsDynamic transcriptomic profiles of zebrafish gills in response to zinc
This SuperSeries is composed of the following subset Series: GSE21894: Dynamic transcriptomic profiles of zebrafish gills in response to zinc depletion GSE21907: Dynamic transcriptomic profiles of zebrafish gills in response to zinc supplementation. Refer to individual Series
ORGANISM(S): Danio rerio 
2010-05-19 | E-GEOD-21914 | biostudies-arrayexpress
TranscriptomicsDiurnal gills transcriptome of the oyster Crassostrea gigas fed with non-harmful and harmful algae
To assess the diurnal gene expression in gills of oyster Crassotrea gigas, gills of 6 oysters were pooled and analyzed by RNa-seq every 4h for 52h (i.e. 13 sampling times). This procedure was executed simultaneously for control oysters fed with the non-harmful algae Heterocapsa triquetra (H.t condit...
ORGANISM(S): Crassostrea gigas 
2017-11-20 | E-MTAB-5345 | biostudies-arrayexpress
GenomicsGills of S. aurata
Gills of S. aurata microbioma
PRJNA985893 | ENA
TranscriptomicsZebrafish il-4 il-10 regulated immunity in gills
The evolutionary origin of vertebrate type 2 immunity is a topic of great interest. Several studies have focused on the immune cell components of evolutionary older vertebrates such as fish. However, how fish cytokines function and whether they have similar roles as in mammals is still a matter of s...
ORGANISM(S): Danio rerio 
2020-05-28 | E-MTAB-8958 | biostudies-arrayexpress
ProteomicsRaw files of samples of gills from Hippocampus reidi
In this project are deposited the raw files of gills samples extracted individually from three adult male specimens of seahorse Hippocampus reidi
ORGANISM(S): Hippocampus Reidi (ncbitaxon:109288) 
2023-01-19 | MSV000091094 | MassIVE
ProteomicsA proteomics of gills approach to understanding salinity adaptation of Scylla paramamosain
Scylla paramamosain (Crustacea) is a commercially important euryhaline species distributed along the coast of southern China and other Indo-Pacific countries. However, a sudden variation in salinity will cause injury or even death of S. paramamosain. In this paper, we simulated a sudden decrease in ...
ORGANISM(S): Scylla paramamosain 
2018-07-31 | PXD009179 | Pride
Scylla paramamosain Gill Adaptive mechanism Itraq protein profile Sudden decrease in salinity 
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