Glycobiology - OmicsDI

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Unknown (1810)
Proteomics (94)
Genomics (17)
Transcriptomics (15)
Metabolomics (2)

Organisms

Aerococcus urinae NBRC 15544 = CCUG 36881 (80)
Andropogon gerardi (80)
Bacteria (80)
Bartonella quintana JK 31 (80)
Burkholderia ubonensis MSMB22 (80)
Canis lupus familiaris (80)
Cnidaria (80)
Ectopseudomonas oleovorans CECT 5344 (80)
Ensifer adhaerens (80)
Halictus scabiosae (80)
Human immunodeficiency virus 1 (80)
Mesocricetus auratus (80)
Miscanthus x giganteus (80)
Morchella importuna (80)
Mus musculus (80)
Panicum virgatum (80)
Pseudomonas aeruginosa PA103 (80)
Pseudomonas aeruginosa SJTD-1 (80)
Rabies virus Nishigahara RCEH (80)
Rattus norvegicus (80)
Rattus rattus (80)
Rhodococcus jostii RHA1 (80)
Rhodopseudomonas palustris (80)
Sorghastrum nutans (80)
Streptococcus dysgalactiae subsp. equisimilis SK1249 (80)
Streptococcus pneumoniae (80)
Homo sapiens (11)
Mus musculus (6)
Rattus rattus (1)
cellular organisms (1)

Organisms

Homo sapiens (8)
Mus musculus (3)
Zobellia galactanivorans (2)
Komagataella phaffii GS115 (1)
soil metagenome (1)

Repository

pride (80)
ENA (17)
MassIVE (11)
biostudies-arrayexpress (10)
geo (5)
jPOST (2)
MetaboLights (2)
iProX (1)

Tissue

Cell culture (14)
Plant cell (7)
Blood serum (6)
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Blood (4)
Blood plasma (4)
Root (4)
Blood cell (3)
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Fibroblast (3)
Hepatocyte (3)
Leaf (3)
Permanent cell line cell (3)
Cell suspension culture (2)
Lung (2)
Whole body (2)
B cell (1)
Blood platelet (1)
Brain (1)
Cerebrospinal fluid (1)
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HEK-293 cell (1)
Islet of Langerhans (1)
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Microglial cell (1)
Milk (1)
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Placenta (1)
Prostate epithelium cell (1)

Disease

Breast cancer (5)
Colon cancer (5)
Disease free (4)
Brain ischemia (2)
Influenza (2)
Obesity (2)
Acute leukemia (1)
Chronic pain (1)
Congenital disorder of glycosylation (1)
Congenital disorder of glycosylation Iq (1)
Genetic disease (1)
Hyperphosphatemic familial tumoral calcinosis (1)
Liver carcinoma (1)
Malignant neoplasm of ovary (1)
Neuroblastoma (1)
Oropharynx cancer (1)
Pharynx squamous cell carcinoma (1)
Prostate cancer (1)
Stomach cancer (1)
Tonsil squamous cell carcinoma (1)
Toxoplasmosis (1)
Tuberculosis (1)
Type 1 diabetes mellitus (1)
Type 2 diabetes mellitus (1)

Technology Type

Mass Spectrometry (80)
Shotgun proteomics (39)
Bottom-up proteomics (25)
Data-dependent acquisition (17)
Affinity purification coupled with mass spectrometry proteomics (7)
Gel-based experiment (6)
Mass spectrometry (2)
MSE (2)
SRM/MRM (2)
Affinity proteomics (1)
All-ion fragmentation (1)
Data-independent acquisition (1)
HDMSE (1)
Top-down proteomics (1)

Instrument Platform

Orbitrap Fusion (3)
6520A Quadrupole Time-of-Flight LC/MS (2)
Orbitrap Eclipse (2)
Velos Plus (2)
Apex ultra (1)
Orbitrap Exploris 240 (1)
Q Exactive (1)
5975C Series GC/MSD (Agilent) (1)
Liquid Chromatography MS - positive - reverse phase (1)
Liquid Chromatography MS - negative - reverse phase (1)

Publication Date

2025 (26)
2024 (22)
2023 (16)
2011 (9)
2022 (6)
2026 (5)
2019 (5)
2016 (4)
2021 (4)
2020 (3)
2010 (2)
2018 (2)
2017 (2)
2008 (1)
2014 (1)
2015 (1)

CHEBI ID

CHEBI:72868 (1)
CHEBI:73765 (1)
CHEBI:9630 (1)
CHEBI:17818 (1)
CHEBI:85158 (1)
CHEBI:165803 (1)
CHEBI:24848 (1)
CHEBI:90333 (1)
CHEBI:28527 (1)
CHEBI:16384 (1)
CHEBI:17716 (1)
CHEBI:28053 (1)
CHEBI:16217 (1)
CHEBI:17308 (1)
CHEBI:49033 (1)
CHEBI:17417 (1)
CHEBI:15699 (1)
CHEBI:17505 (1)
CHEBI:16634 (1)
CHEBI:16119 (1)
CHEBI:6650 (1)
CHEBI:65665 (1)
CHEBI:28044 (1)
CHEBI:15971 (1)
CHEBI:16015 (1)
CHEBI:18012 (1)
CHEBI:16199 (1)
CHEBI:27897 (1)
CHEBI:70976 (1)
CHEBI:17368 (1)

Metabolite Name

Trihydroxy octadecenoic acid (TriHOME isomer II) (1)
Trihydroxy octadecenoic acid (TriHOME isomer I) (1)
Trihydroxy octadecadienoic acid (TriHODE isomer II) (1)
Dihydroxy eicosatetraenoic acid (DiHETE) (1)
Trihydroxy octadecadienoic acid (TriHODE isomer I) (1)
Alpha-Tomatine (1)
Acetyl tryptophan (1)
Feruloyl serotonin (1)
Indole acrylic acid (1)
Caffeoyl putrescine (1)
Feruloyl tyramine (1)
Coumaroyl tyramine (1)
Caffeoyl quinic acid (1)
Unidentifed_1 (1)
Inositol (1)
Gluconic acid lactone (1)
Melibiose (1)
Lactose (1)
Methionine sulfoxide (1)
Shikimic acid (1)
Unidentified_5 (1)
Unidentified_4 (1)
Unidentified_3 (1)
Unidentified_2 (1)
2-ketohexanoic acid (1)
Hypoxanthine (1)
Urea (1)
L-homoserine (1)
Raffinose (1)
L-glutamic acid (1)

First Public Date

2014 (5)
2026 (2)
2024 (2)
2019 (2)
2025 (1)
2022 (1)
2021 (1)
2018 (1)
2017 (1)
2013 (1)

Modification

Not available (1)

Study type

Transcription profiling by array (10)

Release Date

2021 (181)
2023 (128)
2022 (126)
2016 (125)
2017 (117)
2024 (112)
2020 (107)
2025 (104)
2019 (98)
2018 (98)
2015 (87)
2014 (79)
2012 (78)
2013 (71)
2011 (68)
2010 (60)
2009 (48)
2008 (32)
2007 (24)
2006 (14)
2004 (12)
2003 (9)
2026 (8)
2002 (8)
2005 (7)
2001 (7)
1999 (5)
1997 (4)
2000 (1)
1998 (1)

Lab affiliation

Department of Glycobiology, Institute of Chemistry, Slovak Academy of Sciences (14)
Department of Biochemistry, Sapporo Medical University School of Medicine (5)
1School of Natural Sciences, Macquarie University, Sydney, NSW, Australia 2Institute for Glyco-core Research (iGCORE), Nagoya University, Aichi, Japan (3)
Department of Glycobiology, Institute of Chemistry, Slovak Academy of Sciences, Bratislava, Slovakia (2)
Department of Molecular Sciences, Macquarie University, Sydney, NSW, Australia (2)
1 Department of Otorhinolaryngology - Head and Neck Surgery, University of Helsinki and HUS Helsinki University Hospital, P.O.Box 263, FI-00029 HUS, Helsinki, Finland 2 Department of Biosciences and Nutrition, Karolinska Institutet, SE-171 76, Stockholm, Sweden. 3 Research Program in Systems Oncology, Faculty of Medicine, University of Helsinki, Helsinki, Finland. (1)
1. School of Natural Sciences, Macquarie University, Sydney, NSW 2109, Australia 2. Institute for Glyco-core Research (iGCORE), Nagoya University, Nagoya, Japan (1)
1Biomolecular Mass Spectrometry and Proteomics, Bijvoet Center for Biomolecular Research and Utrecht Institute for Pharmaceutical Sciences, University of Utrecht, Padualaan 8, 3584 CH Utrecht, The Netherlands 2Netherlands Proteomics Center, Padualaan 8, 3584 CH Utrecht, The Netherlands (1)
1Department of Chemistry and Sarafan Chem-H, Stanford University, Stanford, CA 94305, USA 2Howard Hughes Medical Institute, Stanford, CA 94305, USA (1)
Akhilesh Pandey, M.D., Ph.D. Department of Laboratory Medicine and Pathology, Mayo Clinic, Rochester, Minnesota 55905, United States (1)
Assistant Professor & K12 Scholar Translational Glycobiology Institute, Department of Translational Medicine Florida International University | Herbert Wertheim College of Medicine (1)
Associate Professor of Biochemistry Associate Professor of Cell Biology Duke University School of Medicine (1)
Associate Professor, Biochemistry and Molecular Biology Department, University of Georgia, Athens, GA, United States of American (1)
Beth Israel Deaconess Medical Center, Harvard Medical School, Boston, MA, USA (1)
Biological Chemistry Section, National Institute of Dental and Craniofacial Research, National Institutes of Health, Bethesda, Maryland, United States (1)
Biomolecular Measurement Division, National Institute of Standards and Technology (1)
Center for Biomedical Mass Spectrometry, Department of Biochemistry, Boston University School of Medicine, Boston, MA 02118, United States of America (1)
Copenhagen Center for Glycomics, Department of Cellular and Molecular Medicine, Faculty of Health and Medical Sciences, University of Copenhagen, Denmark (1)
Department of Biochemistry and Molecular Biology, University of Georgia, Athens (GA), USA (1)
Department of Biochemistry, Dorothy Crowfoot Hodgkin Building, University of Oxford, South Parks Road, OX1 3QU, UK. (1)
Department of Biochemistry, Medical College of Wisconsin Department of OBGYN, Medical College of Wisconsin (1)
Department of Biological Sciences, University of Alberta, Edmonton, Canada Department of Medical Microbiology and Immunology, University of Alberta, Edmonton, Canada (1)
Department of Chemistry and Biomolecular Sciences Macquarie University Sydney, NSW 2109 Australia (1)
Department of Chemistry, Imperial College London, UK Chemical Glycobiology Laboratory, The Francis Crick Institute, London, UK (1)
Department of Chemistry, Imperial College London, UK; Chemical Glycobiology Laboratory, The Francis Crick Institute, London (1)
Department of Laboratory Medicine and Pathology Mayo Clinic Rochester, Minnesota 55905 United States (1)
Department of Laboratory Medicine and Pathology Mayo Clinic, Rochester, Minnesota 55905 (1)
Department of Laboratory Medicine, Institute of Biomedicine, University of Gothenburg, Sweden. Laboratory of Clinical Chemistry, Sahlgrenska University Hospital, Gothenburg, Sweden (1)
Department of Laboratory Medicine, Sahlgrenska academy, University of Gothenburg, Gothenburg, Sweden (1)
Department of Pathology, School of Medicine, Johns Hopkins University (1)

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Generating orthogonal glycosyltransferase and nucleotide sugar pairs as next-generation glycobiology tools.

Not available

S-EPMC7955280 | biostudies-literature

Bioinformatics and molecular modeling in glycobiology.

Not available

S-EPMC2912727 | biostudies-literature

Databases and Bioinformatic Tools for Glycobiology and Glycoproteomics.

Not available

S-EPMC7556027 | biostudies-literature

Galectin-1 couples glycobiology to inflammation in osteoarthritis through the activation of an NF-ÎºB-regulated gene network

Osteoarthritis is a degenerative joint disease that ranks among the leading causes of pain, adult disability, shortening of working life, and socioeconomic costs worldwide. The mechanisms underlying osteoarthritis pathogenesis are yet to be fully elucidated, thus limiting current disease management ...

ORGANISM(S): Homo sapiens

2016-03-01 | E-GEOD-68760 | biostudies-arrayexpress

Glycobiology of reproductive processes in marine animals: the state of the art.

Not available

S-EPMC3528131 | biostudies-literature

The clinical impact of glycobiology: targeting selectins, Siglecs and mammalian glycans.

Not available

S-EPMC7812346 | biostudies-literature

Gene-network analysis identifies susceptibility genes related to glycobiology in autism.

Not available

S-EPMC2683930 | biostudies-literature

Glycobiology simplified: diverse roles of glycan recognition in inflammation.