Glycoside hydrolase

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Unknown (1448)
Genomics (81)
Transcriptomics (53)
Proteomics (45)
Metabolomics (5)

Organisms

Homo sapiens (7)
Mus musculus (6)
Bacteroides thetaiotaomicron (4)
Lachnospira eligens (3)
Agathobacter rectalis (3)
Cellvibrio japonicus (3)
Wolfiporia cocos (2)
Caldicellulosiruptor kronotskyensis (2)
Volvariella volvacea (2)
Parabacteroides distasonis (2)
Phocaeicola vulgatus (2)
Acetivibrio thermocellus DSM 1313 (2)
Methanobrevibacter smithii (2)
Drosophila melanogaster (2)
Bifidobacterium animalis subsp. lactis (1)
Ruminococcus flavefaciens FD-1 (1)
human gut metagenome (1)
Lactobacillus acidophilus NCFM (1)
Folsomia candida (1)
Aspergillus niger (1)
Coprococcus sp. ART55/1 (1)
Schizosaccharomyces pombe (1)
Streptococcus pneumoniae (1)
Triticum aestivum (1)
Arabidopsis thaliana (1)
Fervidibacter sacchari (1)
Caldicellulosiruptor hydrothermalis (1)
Caldicellulosiruptor owensensis (1)
Caldicellulosiruptor acetigenus (1)
Caldicellulosiruptor saccharolyticus (1)

Organisms

Cellvibrio japonicus (3)
Acetivibrio thermocellus DSM 1313 (2)
compost metagenome (2)
Drosophila melanogaster (2)
Flavobacterium algicola (1)
[Clostridium] cellulosi CS-4-4 (1)
Microbacterium sp. CIAB417 (1)
Roseovarius sp. PS-C2 (1)
Celeribacter sp. PS-C1 (1)
Cellulomonas sp. PS-H5 (1)
Shouchella lehensis (1)
Thioclava sp. PTB-PU3-1 (1)
Thermothielavioides terrestris (1)
Pleurotus tuoliensis (1)
Flavobacterium sp. TN-1 (1)
Volvariella volvacea (1)
hypersaline lake metagenome (1)
Vibrio sp. PBL-C16 (1)
Paenibacillus glucanolyticus (1)
Fervidibacter sacchari (1)
Nitratireductor sp. PBL-C9 (1)
Streptococcus mutans (1)
Bacillus sp. PBL-C9 (1)
termite gut metagenome (1)
Bifidobacterium longum subsp. infantis (1)
biogas fermenter metagenome (1)
Wolfiporia cocos (1)
Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505 (1)
Gaetbulibacter sp. PBL-D1 (1)
Solanum lycopersicum (1)

Repository

ENA (78)
biostudies-arrayexpress (36)
pride (33)
geo (20)
MassIVE (6)
MetaboLights (5)
iProX (4)
jPOST (2)
EGA (1)

Tissue

Cell culture (5)
Leaf (2)
Stem (2)
Cell suspension culture (1)
Culture supernatant (1)
Gastric mucosa (1)
Protein (1)
Protein secretion (1)
Seedling (1)
Stigma (1)

Technology Type

Mass Spectrometry (33)
Shotgun proteomics (17)
Bottom-up proteomics (8)
Data-dependent acquisition (5)
Gel-based experiment (5)
Data-independent acquisition (4)
Mass spectrometry (3)
Mass spectrometry assay (2)
Affinity purification coupled with mass spectrometry proteomics (2)
MSE (1)
Top-down proteomics (1)

Instrument Platform

NextSeq 500 (4)
Liquid Chromatography MS - positive - reverse phase (2)
Liquid Chromatography MS - negative - reverse phase (2)
ArrayWoRx Biochip Reader [Applied Precision] (1)
Illumina HiSeq 2000 (1)
LTQ Orbitrap (1)
LTQ Orbitrap Velos Pro (1)
LTQ Orbitrap XL (1)
MaXis (1)
Orbitrap Exploris 480 (1)
Q Exactive Plus (1)
TimsTOF Pro (1)
6520 TOF-MS (Agilent) (1)
Liquid Chromatography MS - negative (1)
Liquid Chromatography MS - positive (1)
Liquid Chromatography MS - negative - hilic (1)
Liquid Chromatography MS - positive - hilic (1)

Publication Date

2025 (14)
2024 (9)
2010 (8)
2015 (7)
2009 (7)
2022 (7)
2018 (7)
2016 (6)
2019 (6)
2014 (5)
2013 (5)
2023 (5)
2020 (4)
2026 (4)
2011 (3)
2021 (3)
2017 (2)
2012 (2)
2008 (1)
2006 (1)

CHEBI ID

CHEBI:145681 (1)
CHEBI:141463 (1)
CHEBI:87766 (1)
CHEBI:17964 (1)
CHEBI:16914 (1)

Metabolite Name

Betaine (2)
Choline (2)
Phosphorylcholine (2)
Maltotriose (2)
UDP-2-acetamido-3-amino-2,3-dideoxy-alpha-D-glucurote (1)
Tricalcium phosphate (1)
Thiadiazolidinone (1)
TG(22:6(4Z,7Z,10Z,13Z,16Z,19Z)/22:6(4Z,7Z,10Z,13Z,16Z,19Z)/O-18:0) (1)
TG(22:5(4Z,7Z,10Z,13Z,16Z)/22:6(4Z,7Z,10Z,13Z,16Z,19Z)/O-18:0) (1)
TG(22:4(7Z,10Z,13Z,16Z)/O-18:0/22:4(7Z,10Z,13Z,16Z)) (1)
TG(20:3(5Z,8Z,11Z)/O-18:0/20:3(5Z,8Z,11Z)) (1)
TG(18:4(6Z,9Z,12Z,15Z)/22:6(4Z,7Z,10Z,13Z,16Z,19Z)/O-18:0) (1)
TG(18:4(6Z,9Z,12Z,15Z)/20:5(5Z,8Z,11Z,14Z,17Z)/O-18:0) (1)
TG(18:4(6Z,9Z,12Z,15Z)/18:4(6Z,9Z,12Z,15Z)/O-18:0) (1)
TG(18:3(6Z,9Z,12Z)/20:5(5Z,8Z,11Z,14Z,17Z)/O-18:0) (1)
TG(18:1(11Z)/O-18:0/18:1(11Z)) (1)
TG(16:0/22:5(4Z,7Z,10Z,13Z,16Z)/O-18:0) (1)
TG(15:0/22:6(4Z,7Z,10Z,13Z,16Z,19Z)/O-18:0) (1)
TG(15:0/22:5(4Z,7Z,10Z,13Z,16Z)/O-18:0) (1)
TG(15:0/22:1(13Z)/O-18:0) (1)
TG(15:0/18:4(6Z,9Z,12Z,15Z)/O-18:0) (1)
TG(15:0/18:2(9Z,12Z)/O-18:0) (1)
TG(14:0/22:2(13Z,16Z)/O-18:0) (1)
TG(14:0/22:0/O-18:0) (1)
TG(14:0/20:5(5Z,8Z,11Z,14Z,17Z)/O-18:0) (1)
TG(14:0/20:2n6/O-18:0) (1)
TG(14:0/18:3(6Z,9Z,12Z)/O-18:0) (1)
TG(14:0/15:0/O-18:0) (1)
Tetracozole (1)
SOFMPBOQLPVEQZ-OWMASPSUSA-N (1)

First Public Date

2025 (20)
2014 (8)
2024 (6)
2013 (6)
2019 (5)
2015 (5)
2026 (4)
2022 (4)
2021 (4)
2020 (4)
2018 (4)
2016 (4)
2023 (2)
2017 (2)

Classification

bacteria (2)

Study type

Transcription profiling by array (23)
RNA-seq of coding RNA (7)
Comparative genomic hybridization by array (2)
Unknown experiment type (1)
High-throughput sequencing (1)
ATAC-seq (1)

Release Date

2022 (120)
2021 (113)
2025 (104)
2020 (102)
2014 (96)
2023 (96)
2019 (94)
2024 (93)
2017 (90)
2018 (87)
2016 (80)
2013 (75)
2015 (73)
2012 (59)
2010 (40)
2011 (35)
2009 (26)
2006 (22)
2008 (19)
2007 (16)
2005 (14)
2026 (12)
2004 (7)
2002 (6)
2003 (3)
2001 (1)
2000 (1)

Lab affiliation

Faculty of Chemistry, Biotechnology and Food Science Norwegian University of Life Sciences (2)
NREL (2)
University of York (2)
Xiamen University, China (2)
Analytics Core Facility Essen (ACE), Chemische Biologie, Universität Duisburg-Essen, ZMB, Germany (1)
Bavarian Center for Biomolecular Mass Spectrometry, Technical University of Munich, Freising, Germany (1)
Biosciences Institute, Newcastle University, Newcastle, UK (1)
College of Animal Science and Technology, Northwest A&F University, Yangling, Shaanxi, China (1)
Department of Biomolecular Sciences, Weizmann Institute of Science, Rehovot, Israel (1)
Department of Life Sciences, Chalmers University of Technology, 412 96, Gothenburg, Sweden (1)
Department of Medical Biology, UiT- The Arctic University of Norway, 9019 Tromsø, Norway (1)
Department of Microbiology and Immunology, University of Michigan, Ann Arbor, MI, USA (1)
Department of Molecular Ecology MPI for Marine Microbiology Celsiusstr. 1 D-28359 Bremen Germany (1)
Dr. Christina Ludwig Bavarian Center for Biomolecular Mass Spectrometry Technical University Munich (TUM) Gregor-Mendel-Straße 4 85354 Freising GERMANY (1)
Faculty of Chemistry, Biotechnology and Food Science Norwegian University of Life Sciences Post Office Box 5003 1432, Ås Norway (1)
INBIOTEC (1)
Institut für Experimentelle Medizin (IEM) Arbeitsgruppe Systematische Proteomforschung Christian-Albrechts-Universität zu Kiel Kiel, Germany (1)
Institute for Cell and Molecular Biosciences, Newcastle University, Newcastle upon Tyne, UK. (1)
Institute for Plant Sciences, University of Cologne, 50674 Cologne, Germany (1)
National Institute of Plant Genome Research Aruna Asaf Ali Marg New Delhi - 110 067 (1)
National Laboratory of Biorenewables (LNBR), Brazilian Center for Research in Energy and Materials (CNPEM), Campinas, São Paulo, Brazil (1)
Pacific Northwest National Laboratory, USA (1)
Rowett Institute Gut Health Theme University of Aberdeen Foresterhill Aberdeen AB25 2ZD (1)
School of Biosciences University of Sheffield Western Bank Sheffield S10 2TN United Kingdom (1)
Staff Scientist Biological Systems & Engineering Division Lawrence Berkeley National Laboratory Berkeley CA 94720 (1)
State Key Laboratory of Mycology, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, China (1)
The Protein Engineering and Proteomics Group (PEP), Faculty of Chemistry, Biotechnology and Food Science, Norwegian University of Life Sciences, Norway (1)
University of Nottingham, School of Life Sciences (1)
Xiamen University (1)

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Phylogenetic, microbiological and glycoside hydrolase diversities within the extremely thermophilic, plant biomass-degrading genus Caldicellulosiruptor

Phylogenetic, microbiological and comparative genomic analysis was used to examine the diversity among members of the genus Caldicellulosiruptor with an eye towards the capacity of these extremely thermophilic bacteria for degrading the complex carbohydrate content of plant biomass. Seven species fr...

ORGANISM(S): Caldicellulosiruptor lactoaceticus

2010-11-29 | E-GEOD-23606 | biostudies-arrayexpress

Beta-glucan is a major growth substrate for human gut bacteria related to Coprococcus eutactus

The gut bacterium Coprococcus sp. ART55/1 has been found to encode two genes containing glycoside hydrolase family 9 (GH9) catalytic domains. These genes are hypothesised to impact upon the ability of this bacteria to utilise different carbon sources. To further investigate the role of these genes, ...

ORGANISM(S): Coprococcus sp. ART55/1

2020-03-09 | E-MTAB-8048 | biostudies-arrayexpress

A disulfide redox switch mechanism regulates glycoside hydrolase function

Disulfide bond is a key post-translational modification involved in protein folding, stability, and functional regulation. While the structural role of disulfide bonds has been extensively studied in protein chemistry, their potential involvement in regulating catalytic activity of carbohydrate-acti...

ORGANISM(S): Bacteria unclassified Eubacteriaceae

2025-10-30 | PXD070002 | Pride

Phylogenetic, microbiological and glycoside hydrolase diversities within the extremely thermophilic, plant biomass-degrading genus Caldicellulosiruptor

PRJNA129969 | ENA

Phylogenetic, microbiological and glycoside hydrolase diversities within the extremely thermophilic, plant biomass-degrading genus Caldicellulosiruptor

ORGANISM(S): Caldicellulosiruptor acetigenus Caldicellulosiruptor owensensis Caldicellulosiruptor saccharolyticus Caldicellulosiruptor hydrothermalis Caldicellulosiruptor bescii Caldicellulosiruptor kronotskyensis

2010-11-29 | GSE23606 | GEO

Annotation and comparative analysis of the glycoside hydrolase genes in Brachypodium distachyon.

Not available

S-EPMC3091745 | biostudies-literature

Crystal structure of the glycoside hydrolase PssZ from Listeria monocytogenes.

Not available

S-EPMC6613446 | biostudies-literature

A disulfide redox switch mechanism regulates glycoside hydrolase function.

Not available

S-EPMC12770490 | biostudies-literature

Aspergillus niger DLFCC-90 rhamnoside hydrolase, a new type of flavonoid glycoside hydrolase.

Not available