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TranscriptomicsChromosomal duplication in the grandifolia-D mutants of Arabidopsis thaliana, expression data
The number of cells in an organ is a major factor for the determination of organ size. However, genetic basis of cell number determination is not well understood. Three grandifolia-D (gra-D) mutants of Arabidopsis thaliana developed huge leaves containing two- to three-fold increased number of cells...
ORGANISM(S): Arabidopsis thaliana 
2010-05-18 | E-GEOD-15722 | biostudies-arrayexpress
TranscriptomicsANGUSTIFOLIA 3 binds SWI/SNF chromatin remodeling complexes to regulate transcription during Arabidopsis leaf development
The transcriptional coactivator ANGUSTIFOLIA 3 (AN3) stimulates cell proliferation during Arabidopsis leaf development, but the molecular mechanism is largely unknown. We show here that inducible nuclear localization of AN3 during initial leaf growth results in differential expression of important t...
ORGANISM(S): Arabidopsis thaliana 
2014-09-09 | E-GEOD-42875 | biostudies-arrayexpress
TranscriptomicsNatural variation of gibberellin responses in Arabidopsis thaliana
To assess natural variation in the ability to respond to changes in gibberellin metabolism, we examined the effect of the ectopic expression of GA20ox1 in 10 Arabidopsis thaliana accessions. RNA-seq was performed on the sixth leaf, which was micro-dissected (size < 0.25 mm2) at the beginning of the ...
ORGANISM(S): Arabidopsis thaliana 
2017-12-14 | E-MTAB-4508 | biostudies-arrayexpress
TranscriptomicsRNA-sequencing data of young developing leaves of 6 Arabidopsis accessions in control and mild drought conditions
Transcriptome analysis on young developing leaves of 6 Arabidopsis thaliana accessions (An1, Blh1, Col0, Cvi0, Oy0, Sha) subjected to control and mild drought conditions.
ORGANISM(S): Arabidopsis thaliana 
2015-02-28 | E-MTAB-3279 | biostudies-arrayexpress
TranscriptomicsA genetics screen highlights emerging roles for CPL3, RST1 and URT1 in RNA metabolism and silencing (small RNA profiling part)
CPL3, RST1 and URT1 are three new genes involved in RNA metabolism and suppressing RNA silencing in Arabidopsis. To investigate how transcripts and small RNAs varies in the absence of them, RNA and small RNA sequencing were performed on the shoot tissues of 17-day-old EMS mutants of CPL3, URT1 or RS...
ORGANISM(S): Arabidopsis thaliana 
2019-05-03 | E-MTAB-7874 | biostudies-arrayexpress
TranscriptomicsA genetics screen highlights emerging roles for CPL3, RST1 and URT1 in RNA metabolism and silencing (mRNA profiling part)
CPL3, RST1 and URT1 are three new genes involved in RNA metabolism and suppressing RNA silencing in Arabidopsis. To investigate how transcripts and small RNAs varies in the absence of them, RNA and small RNA sequencing were performed on the shoot tissues of 17-day-old EMS mutants of CPL3, URT1 or RS...
ORGANISM(S): Arabidopsis thaliana 
2019-04-25 | E-MTAB-7873 | biostudies-arrayexpress
UnknownDetection of SARS-CoV-2 N-antigen in blood during acute COVID-19 provides a sensitive new marker and new testing alternatives.
Not available
S-EPMC7724284 | biostudies-literature
GenomicsGenome-wide identification of PPD2 target genes
To identify the direct target genes of PPD2, tandem chromatin affinity purification (TChAP, Verkest et al. (2014)), a variant of chromatin immunoprecipitation (ChIP) in which tandem affinity tags are used instead of epitope tags, followed by sequencing (TChAP-Seq) was performed. An Arabidopsis cell ...
ORGANISM(S): Arabidopsis thaliana 
2015-07-07 | E-MTAB-3046 | biostudies-arrayexpress
UnknownMonogenic early-onset lymphoproliferation and autoimmunity: Natural history of STAT3 gain-of-function syndrome.
Not available
S-EPMC10081938 | biostudies-literature
UnknownGeneral and abdominal adiposity and hypertension in eight world regions: a pooled analysis of 837 population-based studies with 7·5 million participants.
Not available
S-EPMC7616775 | biostudies-literature
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